LOCUS       NM_001080907            1849 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus zinc finger protein 639 (Zfp639), mRNA.
ACCESSION   NM_001080907 XM_001066236
VERSION     NM_001080907.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1849)
  AUTHORS   Bruce,J.W., Hierl,M., Young,J.A. and Ahlquist,P.
  TITLE     Cellular transcription factor ZASC1 regulates murine leukemia virus
            transcription
  JOURNAL   J Virol 84 (15), 7473-7483 (2010)
   PUBMED   20484494
REFERENCE   2  (bases 1 to 1849)
  AUTHORS   Bogaerts,S., Vanlandschoot,A., van Hengel,J. and van Roy,F.
  TITLE     Nuclear translocation of alphaN-catenin by the novel zinc finger
            transcriptional repressor ZASC1
  JOURNAL   Exp Cell Res 311 (1), 1-13 (2005)
   PUBMED   16182284
REFERENCE   3  (bases 1 to 1849)
  AUTHORS   Imoto,I., Yuki,Y., Sonoda,I., Ito,T., Shimada,Y., Imamura,M. and
            Inazawa,J.
  TITLE     Identification of ZASC1 encoding a Kruppel-like zinc finger protein
            as a novel target for 3q26 amplification in esophageal squamous
            cell carcinomas
  JOURNAL   Cancer Res 63 (18), 5691-5696 (2003)
   PUBMED   14522885
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC087704.1.
            
            On Aug 31, 2012 this sequence version replaced NM_001080907.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC087704.1, FQ149402.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132263, SAMD00132265
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1849              BC087704.1         2-1850
FEATURES             Location/Qualifiers
     source          1..1849
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q24"
     gene            1..1849
                     /gene="Zfp639"
                     /gene_synonym="Znf639"
                     /note="zinc finger protein 639"
                     /db_xref="GeneID:683504"
                     /db_xref="RGD:1585689"
     exon            1..205
                     /gene="Zfp639"
                     /gene_synonym="Znf639"
                     /inference="alignment:Splign:2.1.0"
     exon            206..276
                     /gene="Zfp639"
                     /gene_synonym="Znf639"
                     /inference="alignment:Splign:2.1.0"
     exon            277..345
                     /gene="Zfp639"
                     /gene_synonym="Znf639"
                     /inference="alignment:Splign:2.1.0"
     CDS             288..1745
                     /gene="Zfp639"
                     /gene_synonym="Znf639"
                     /codon_start=1
                     /product="zinc finger protein 639"
                     /protein_id="NP_001074376.1"
                     /db_xref="GeneID:683504"
                     /db_xref="RGD:1585689"
                     /translation="MSEYPKKRKRKTLHPSRYSDSSGISRIADGVSGIFSDHCYSVCS
                     MRQPDLKYFDNKDDDSDPETANDLPKFTDGTKARSRSQSCLVPSPVLRILEHTVFSTE
                     KPADVEICDEECGSPESGHQHTHEESPIEVHTSEDVPIAVEVHAISEDYDIEAENNSS
                     ESLLDQTDEEPPAKLCKILDKSQASNVTAQQKWPLLRANSSGLYKCELCEFNSKYFSD
                     LKQHVILKHKRTDSNVCRVCKESFSTNMLLIEHAKLHEEDPYICKYCDYKTVIFENLS
                     QHIADTHFSDHLYWCEQCDVQFSSSSELYLHFQEHSRDEQYLCQFCEHETGDPEDLHS
                     HVVNEHARRLIELSDKCGSGGHGQCSLLSKITFDKCKNFFVCQVCGFRSRLHTNVNRH
                     VAIEHTKIFPHVCDDCGKGFSSMLEYCKHLNSHLSEGIYLCQYCEYSTGQIEDLKIHL
                     DFKHSADLPHKCSDCLMRFGNERELISHLPVHETT"
     exon            346..456
                     /gene="Zfp639"
                     /gene_synonym="Znf639"
                     /inference="alignment:Splign:2.1.0"
     exon            457..591
                     /gene="Zfp639"
                     /gene_synonym="Znf639"
                     /inference="alignment:Splign:2.1.0"
     exon            592..1799
                     /gene="Zfp639"
                     /gene_synonym="Znf639"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gatgatcacc tcccctctcc tattcgtgct taagaacctg aagcaagatg gacttgctgg
       61 tggcagtatg gaacagtgag ggttcacaca tgcatactta gttacctgat gccagaagtc
      121 cgaagacatg tactcttggg cctttggttc ggtctatgtt gcaatggact ttattggcgt
      181 tggtctcttc cttgcttaga atgaggcact tcttgccatt cgtggaaacc tgcctgtagt
      241 tcatttttct cacagcagta ttgagagtta taccaaattg aaaagatatg agtgaatatc
      301 ctaaaaagag aaaaaggaag actttacacc cttctcgata ttcagattct tctggaataa
      361 gcagaattgc agatggagtc agtggaattt tttctgatca ttgttacagt gtttgctcta
      421 tgagacagcc agacttaaaa tattttgaca acaaagatga tgattctgat cctgagacag
      481 caaatgactt gcccaaattt acagatggaa ccaaggccag aagcaggagt cagagctgcc
      541 tggttcccag ccctgtgctt aggattctag agcacactgt cttttccaca gaaaagcctg
      601 ctgatgttga aatttgtgat gaagagtgtg gctcccctga gtcagggcat cagcataccc
      661 acgaggagag ccctatagag gttcacacct cggaagatgt cccgattgct gtggaagttc
      721 atgcgatttc tgaagattat gatatagagg cagagaacaa ttcctctgag agcctcctgg
      781 accagactga tgaagaacca ccagctaaac tctgtaaaat acttgacaag agccaagctt
      841 caaatgtgac cgcccaacag aagtggccat tactgagagc caacagcagt ggcctctaca
      901 aatgtgaact ttgtgaattc aacagtaagt atttttccga cctaaagcag catgtcatcc
      961 tgaagcacaa gcgcactgac tcgaatgtgt gtcgggtgtg taaggagagc ttctctacca
     1021 atatgcttct tattgagcac gccaaacttc atgaagaaga tccctacatc tgtaagtact
     1081 gtgactataa gacagtgatc tttgagaacc tcagccagca cattgcagac acccacttca
     1141 gtgaccacct ctactggtgt gagcagtgtg atgtgcagtt ctcctcaagc agtgagctct
     1201 acctgcactt ccaggagcac agccgcgatg agcaatacct gtgccagttc tgtgagcatg
     1261 agacaggtga ccctgaggac ttgcacagcc atgtcgtcaa tgagcacgct cgcagactga
     1321 tcgagctgag tgacaagtgc ggcagtggtg gccatgggca gtgcagcctt ttaagcaaga
     1381 tcacctttga caaatgcaaa aatttcttcg tgtgtcaagt atgtggcttt cggagcagac
     1441 ttcacacaaa tgtcaacaga cacgtggcta tcgagcatac taaaatattc cctcatgttt
     1501 gtgatgactg tgggaagggc ttttccagca tgttggaata ttgcaagcat ctaaattcac
     1561 atctgtctga agggatttat ttatgccagt attgtgaata ttcaacagga caaattgaag
     1621 atcttaaaat tcatctagat ttcaagcatt cagctgactt gcctcataaa tgtagtgact
     1681 gcttgatgag gtttgggaat gagagggaat taatcagtca ccttccagtc cacgagacta
     1741 cctgactgtt atctttacat aatgtttatg taaaataaat tcttttttaa tgttaaaaaa
     1801 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
//
