LOCUS       NM_001401702            3552 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus zinc finger protein 628 (Zfp628), mRNA.
ACCESSION   NM_001401702 XM_017589975
VERSION     NM_001401702.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3552)
  AUTHORS   Chen,G.Y., Muramatsu,H., Ichihara-Tanaka,K. and Muramatsu,T.
  TITLE     ZEC, a zinc finger protein with novel binding specificity and
            transcription regulatory activity
  JOURNAL   Gene 340 (1), 71-81 (2004)
   PUBMED   15556296
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Feb 18, 2022 this sequence version replaced XM_017589975.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643297.790.1,
                                           SRR26643293.1313.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-190               JAXUCZ010000001.1  77949807-77949996   c
            191-297             JAXUCZ010000001.1  77947501-77947607   c
            298-3552            JAXUCZ010000001.1  77942431-77945685   c
FEATURES             Location/Qualifiers
     source          1..3552
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q12"
     gene            1..3552
                     /gene="Zfp628"
                     /note="zinc finger protein 628"
                     /db_xref="GeneID:100359484"
                     /db_xref="RGD:2323809"
     exon            1..190
                     /gene="Zfp628"
                     /inference="alignment:Splign:2.1.0"
     exon            191..297
                     /gene="Zfp628"
                     /inference="alignment:Splign:2.1.0"
     exon            298..3552
                     /gene="Zfp628"
                     /inference="alignment:Splign:2.1.0"
     CDS             303..3422
                     /gene="Zfp628"
                     /codon_start=1
                     /product="zinc finger protein 628"
                     /protein_id="NP_001388631.1"
                     /db_xref="GeneID:100359484"
                     /db_xref="RGD:2323809"
                     /translation="MAGSHMDMVPASTMEGTGEKPDSTTPAPTPAAQYECGECGKSFR
                     WSSRLLHHQRTHTGERPYKCPDCPKAFKGSSALLYHQRGHTGERPYQCPDCPKAFKRS
                     SLLQIHRSVHTGLRAFTCGLCGLAFKWSSHYQYHLRQHTGERPYPCPDCPKAFKNSSS
                     LRRHRHVHTGERPYSCSICGKSFTQSTNLRQHQRVHTGERPFRCPLCPKTFTHSSNLL
                     LHHRTHSPAPSPAPAPAPDPTPTGETSRAGTKVLVSDAYLQPRSPPEPPAPPPQPPPV
                     VPEFFLAAAETTVELVYRCDGCEQGFSSEELLLEHQPCPGPTVATQPQDVPAELPQAD
                     SALQPPPATTGPSNFACLPCGKSFQTVAGLSRHQHSHGAASGQAFRCGSCDGAFPQLA
                     SLLAHQQCHVEEAAAGRPPPQAEVAEVTCPQEPVAPATPAPPPPPPAPVSAERPYKCA
                     ECGKAFKGSSGLRYHLRDHTGERPYQCGECGKAFKRSSLLAIHQRVHTGLRAFTCGQC
                     GLTFKWSSHYQYHLRLHSGERPYACTECGKAFRNTSCLRRHRHVHTGERPHSCSVCGK
                     SFAQTSNLRQHQRVHTGERPFRCPLCPKTFTHSSNLLLHQRTHSAERPFACPICGRGF
                     VMAAYLQRHLRTHTPATTTSGTTGPAVASQPPTPLAAAPTPLAAQDVHVLPNLQAILS
                     LEVAGGTAQATPPGPVAPSSQTFLLVQTAQGLQLIPSSVQPPTPPPPPPPPKLILLPP
                     ASAGGMGNGAARPGPRAVGKAGQGTGVVWFPGPGGLGVQGGGNAGTSGGGQSLIVLQN
                     VGSGETGPQEVSGVQLQPAQEVATVQLQPAQEVTTVQLQPAQEVTTVQLQPLTGQVSN
                     SSGGAVATEAPNLLVVQSGAAEELLTSSGPGEVGDSEASAGMVQDVLFETLQTDEGLQ
                     SVLVLSGADGEQTRLCVQEVETLSPGLTEPAATDPSGQKLLIFRSAPAADLLESSSVA
                     GGTTTLQLLAPPAPGPVSAPVGVPVAPPSQMVQVVPAVTGPGVMPPQNLPSIQIVQTL
                     PAVQLVHTF"
ORIGIN      
        1 ggtttgtgtg cgcgagaggc cgccgataaa ggttgagtgc ctcgcgccgg gggccgtggg
       61 gagggagcgc gcccccgccc cctcccgggc cgcgggtccc ccagcgcagt gccgggcccc
      121 gcttcccgtc agcccccgcg ggaaggccct ggggttctct ttgatccccc ctccccgacc
      181 ggggccacag gtttagaagg atccagccca aaggctaatg tggtcacaga aaagagtgtc
      241 agccatctgc agctaggaga tatgcttaaa ggaaagactc agcagcaagg agctggggtg
      301 tgatggccgg ctcccacatg gacatggtgc cagcttccac catggaggga actggggaaa
      361 agccagattc cactacccca gcacccaccc ctgctgctca gtatgagtgc ggggaatgtg
      421 gcaagtcctt caggtggtca tctcggctcc tgcatcatca gcgcactcac acaggtgaac
      481 ggccctataa atgtccggac tgccccaaag ccttcaaggg ttcctcagcc cttctctacc
      541 accagcgggg ccatacgggt gagcggccct atcagtgccc tgactgcccc aaagccttca
      601 agcgctcctc cttgctgcag attcaccgca gtgtgcacac aggcctgcgg gccttcacct
      661 gtggcctctg tggtctggcc ttcaagtggt catcccatta ccaataccac ttgagacagc
      721 atactggtga gcggccctac ccgtgtcctg actgccccaa ggccttcaag aactcatcca
      781 gcttaaggcg ccaccggcat gtgcacacgg gagaacgccc ttacagctgc agcatttgtg
      841 ggaagagctt tactcagagt accaaccttc gccagcatca gcgggtacac acgggcgagc
      901 gcccctttcg ttgtccactt tgtcccaaga ccttcacaca ctcctccaac ctgctgctac
      961 accatcgcac ccacagccct gcccccagcc ccgcccccgc ccctgcccca gaccccaccc
     1021 ccacagggga gaccagcaga gctggcacca aggttctggt ctctgatgcc tacttgcagc
     1081 cccgcagccc acctgagcct ccagccccac caccccagcc cccacctgtg gtgcccgaat
     1141 tctttttggc tgctgctgag actacagtgg agctggtata ccgctgcgat ggttgcgagc
     1201 agggcttcag tagcgaggag ctcctcttgg agcaccaacc atgcccaggt cccactgtgg
     1261 ccacccagcc ccaggatgtg cctgccgagc tgccccaggc tgactctgct ctgcagcccc
     1321 cacctgccac tactggccct tctaattttg cttgccttcc ttgcgggaaa tccttccaga
     1381 cagtggcagg cctgtcccgt caccagcaca gccatggtgc ggccagtgga caggcctttc
     1441 gctgtggtag ctgtgatggt gccttcccac aactggccag cctgttggct caccagcagt
     1501 gccacgtgga ggaggcggca gctggacgcc caccacctca ggctgaagtt gcagaagtca
     1561 cctgtcccca ggaacctgta gccccagcca ctcctgctcc acctcctcct ccacctgccc
     1621 cagtttctgc agagcggccc tacaaatgtg cagagtgtgg caaggccttc aagggttctt
     1681 ccgggctgcg ctaccacctg cgggaccaca caggtgagcg gccctaccaa tgcggggagt
     1741 gcggcaaagc cttcaagcgc tcctccctgc tggctatcca ccagcgtgtg cacacgggcc
     1801 tgcgagcctt cacctgtggc cagtgtggcc tcaccttcaa gtggtcgtcc cactaccagt
     1861 accatctgcg acttcattct ggtgagcggc cctatgcctg cactgagtgt ggcaaagcct
     1921 tccgtaacac ttcgtgcctg cggcgccacc ggcacgtgca cactggcgag cggccccact
     1981 cgtgtagcgt gtgtggcaag agcttcgcac agacctccaa cttgcggcag caccaacgtg
     2041 tgcacacggg cgagcgaccc ttccgttgcc cgctctgccc caagaccttc acacactcct
     2101 ccaacctgct gctgcaccag cgaactcatt ctgcggagcg cccttttgcc tgccccattt
     2161 gtggccgagg ctttgtcatg gccgcctacc tgcagcggca tctgaggacg cacaccccag
     2221 ccactacaac ttcggggacc actggccctg ctgtagcatc gcagccccct accccattgg
     2281 ctgcagctcc aactccactg gccgctcaag atgttcatgt tctccctaac ctacaggcca
     2341 tactttcact cgaagtagct gggggcacag ctcaggctac acccccaggc ccagttgccc
     2401 ccagttcaca gacatttctc ctggtacaga ctgcccaggg cctccagctg attcctagca
     2461 gtgtccagcc ccctacccca ccaccaccgc ctccaccccc taaactcatt ctgctgcctc
     2521 ctgccagtgc tggaggtatg ggcaatggtg ctgcaaggcc aggccctcgg gctgttggga
     2581 aagctggaca ggggacaggg gtagtgtggt ttcccggccc aggtggtcta ggggtgcaag
     2641 gaggaggcaa tgctgggact agcgggggcg ggcagagcct cattgttcta cagaatgtag
     2701 ggagtgggga gacaggacca caggaagtga gtggggttca gcttcagcca gcacaggaag
     2761 tggccacggt ccaactacag cctgcacagg aagtgaccac agtccagcta caaccagcac
     2821 aggaggtgac tacagtccag ctccagcccc tgacaggaca agtctccaat tctagtggag
     2881 gagctgtggc taccgaggct ccaaacctgc tggtggttca gagtggggca gctgaagagt
     2941 tgctgaccag ctctggacct ggggaagtgg gagacagtga ggccagcgct ggtatggttc
     3001 aggatgtcct gtttgagaca ttgcagacag atgaggggct gcagagtgtg ctggtgctga
     3061 gtggagcgga tggggaacag actaggctct gtgtgcagga ggtggaaacg ctttcgcctg
     3121 gactgaccga gccagctgcc actgacccat caggacagaa actccttatt tttcgtagcg
     3181 ccccagctgc tgaccttcta gaaagtagca gcgttgcagg aggtaccaca acgctgcaac
     3241 tcctggcccc accagcacct ggcccggtct ctgcccctgt gggggtgcct gtagctcccc
     3301 catcccagat ggtacaagtg gtccccgcag tgactggacc aggggtcatg cctccccaga
     3361 acttgccctc catccagata gtgcagactc tgcctgcagt ccagttggta cacacgtttt
     3421 gaagagaccc agtagcagct ctgtcacaaa ccctcttccc ccgcaattaa ctgttctcct
     3481 cagctgggct ggggtcagcc ccagagtcaa gggggctgct ggctggactt gctaataaag
     3541 acccagaatc tc
//
