LOCUS       NM_001408734            2664 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus zinc finger protein 617 (Zfp617), mRNA.
ACCESSION   NM_001408734 XM_006252955
VERSION     NM_001408734.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2664)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000016.1.
            
            On Jun 22, 2022 this sequence version replaced XM_006252955.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643429.50162.1,
                                           SRR26643298.70806.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN16676806,
                                           SAMN16676807 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-92                JAXUCZ010000016.1  17870008-17870099   c
            93-219              JAXUCZ010000016.1  17854621-17854747   c
            220-280             JAXUCZ010000016.1  17854377-17854437   c
            281-2664            JAXUCZ010000016.1  17850310-17852693   c
FEATURES             Location/Qualifiers
     source          1..2664
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /map="16p14"
     gene            1..2664
                     /gene="Zfp617"
                     /note="zinc finger protein 617"
                     /db_xref="GeneID:100361660"
                     /db_xref="RGD:2319713"
     exon            1..92
                     /gene="Zfp617"
                     /inference="alignment:Splign:2.1.0"
     CDS             90..1361
                     /gene="Zfp617"
                     /note="zinc finger protein 136-like; rCG38665-like"
                     /codon_start=1
                     /product="zinc finger protein 617"
                     /protein_id="NP_001395663.1"
                     /db_xref="GeneID:100361660"
                     /db_xref="RGD:2319713"
                     /translation="MALVTFEDVAVRFTQEEWALLDPSQKILYRDVMRETYRNLTSVG
                     INWECWDLEACFRSLGRNLRVQVVKRKCELTNSGPCAETVVQSKLPECHTAIQSSLKR
                     PTTSNSKYRPCDYQKYVKKYYECKMCGKVFMCLGSLKKHKKTHSGEKPYKCKYCEKAF
                     SYRYCVDRHMLTHNTDRYKCRVCRKTFSNAIALREHKAIHSGEIPECKECGRMFWTSS
                     SLDLHKRLHTTEKLYECKHCGKAFTGYCSFQLHKRTHTGEKPYECKQCGKTFRHSSHV
                     QAHKRIHTGEKPYECMQCGKTFTSGHCARRHLGTHSGAWPYKCEVCGKAYPYVYSLRN
                     HKKCHNEEKLYECKQCGKAFKCISSLRNHETTHTGEKPYECKECGKAFSCPSYIQNHM
                     RTHKRQAYECKECGKVFSYSKSLRRHMAIHS"
     exon            93..219
                     /gene="Zfp617"
                     /inference="alignment:Splign:2.1.0"
     exon            220..280
                     /gene="Zfp617"
                     /inference="alignment:Splign:2.1.0"
     exon            281..2664
                     /gene="Zfp617"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ttttcggcgc tctccctggc ggcttcgcaa tgcgcacgga ccgcgttgac accccgcact
       61 gagcagcgca ggcaggacag gagcgcacta tggccttggt gacctttgag gacgtggctg
      121 tgcgcttcac ccaagaagag tgggctttgc tggatccttc ccagaagatt ctctacagag
      181 atgtgatgcg ggaaacctat aggaatctga cttctgtagg tataaactgg gaatgctggg
      241 atttggaagc ttgtttcaga agtctaggga gaaatctgag agtccaagtg gtaaagagaa
      301 agtgtgaact tacaaacagt ggcccgtgtg cagaaacagt tgtccagtca aagcttcctg
      361 aatgtcacac cgccattcag tcatccctga agaggcccac tacatccaac tctaagtaca
      421 gaccatgtga ctatcagaaa tacgtaaaga aatactatga atgtaaaatg tgtggtaaag
      481 tctttatgtg ccttggctcc cttaagaaac ataaaaagac ccatagcgga gagaagccgt
      541 ataaatgtaa atactgcgag aaggccttca gttaccgcta ctgtgttgac aggcacatgc
      601 tcactcacaa cacagacagg tataagtgca gggtatgcag aaagacattc tctaacgcca
      661 ttgcccttag ggaacataaa gcgattcact ccggagagat acctgaatgt aaggaatgtg
      721 gaagaatgtt ctggacttcc agttccctag acttgcataa aaggcttcat actacagaaa
      781 aactgtatga atgtaaacac tgcgggaaag ccttcactgg ttactgttct tttcaactgc
      841 ataagaggac tcacactggg gagaaacctt atgaatgcaa gcagtgtggg aaaaccttca
      901 gacactccag ccatgttcaa gcacataagc gaattcacac tggagagaag ccttatgaat
      961 gtatgcagtg tgggaagaca ttcacttctg gccactgtgc aagaagacat ctagggacgc
     1021 acagtggagc ctggccttac aaatgtgagg tatgcgggaa agcttacccc tatgtctatt
     1081 cccttcgaaa ccacaagaag tgccacaatg aagaaaagct ttacgaatgt aaacaatgtg
     1141 ggaaagcctt taaatgtatt tcttccttac gcaaccatga gaccactcac actggagaga
     1201 agccgtatga atgtaaggag tgtgggaagg ccttcagttg tcccagttac attcagaatc
     1261 acatgagaac acacaaaagg caggcctatg agtgtaagga gtgtggcaag gtgttctcat
     1321 actccaaaag tcttcggagg cacatggcta tacacagtta attggaggag gatcgtttaa
     1381 atacttacgt caaagagctc tgcacattcc agctcctcgt taaaaaaaga aaaaaaaaat
     1441 ggcagtggaa agcgagcctc tgaatgcagt gtgtgtgcca aaggcccagt gtttgccacg
     1501 gtttgtgtga caaagcctct gagttgaaag aacactagaa agaggttcat ctctcaggat
     1561 gtactgacga ggacttccac agagagaact tgggaaagct ttctggccat tcttgctagc
     1621 acacatggga agacatggtg aagagaaaga gatctgtgtc tgttagcctc tcccacccta
     1681 ccttgtaaca aagtcttaag tcaggtgccg tgttacgtcc atgacccacc acagacacga
     1741 aatccgtaaa tggagacaat tgttggattc ttgccaagtt aacaaatgtt ttcaaaccca
     1801 cgaagtgagt tcctaaagaa gtataaaacc tgctgatcca atgctgccta gaagccacga
     1861 tgggacagtg gtgacagtgg cctgtggttt ctctcagtag ctcactgcta aatgtgtcag
     1921 tgtactgtgg acttctgatt cttagtcata atttggttgg tatttggagt ttcaaatgtg
     1981 catactgtct tgattatgtc tacccaaagt taccccagac actcctcaac atgtccccct
     2041 cccaccttca tgtccactcc ccacccgctc ccgttttctt tttcataacc cattatctta
     2101 tgcacctagc caaagcttca gtgtgttgaa caatgaaaca gctgcaccct gtcctccgct
     2161 cctacatctt tcaacccctt ctgtgggttt taagcaatcg tttctgggtg gttttaatat
     2221 ctatttattg ggggcggaat gagtcatgct gaaacacccg tgttcatctg aacctacctg
     2281 gttctagttt cgctctccaa tgtaagtggg accatagttg tctgccaaac ttcccaggct
     2341 gtatgtgtat tcaatgagag tggtttttcc ttgtccacaa aatttcattt gttgcatttt
     2401 aacaaagtta gatcctacaa gtaagttgaa atgtatttga agggctggca aggtggctca
     2461 gtggattaag gtgctttctg cctaccctga tgacttgagt tcaagtccta gaaaacgtaa
     2521 aataaaccaa ctcctgtaag ctgccttctg acctccacac ataccacaag tacaaaataa
     2581 aaatacagtt caaatataca ttttaatcat aattttaagt acttttgtgg ttaatgggcc
     2641 aataaaaact gactttgaaa attg
//
