LOCUS       XM_017589943            5248 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 551 (Zfp551),
            transcript variant X1, mRNA.
ACCESSION   XM_017589943
VERSION     XM_017589943.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_017589943.3.
            
            On Jan 21, 2021 this sequence version replaced XM_017589943.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5248
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5248
                     /gene="Zfp551"
                     /note="zinc finger protein 551; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     ESTs, 100 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 29 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:682964"
                     /db_xref="RGD:1592780"
     CDS             197..2362
                     /gene="Zfp551"
                     /codon_start=1
                     /product="zinc finger protein 551"
                     /protein_id="XP_017445432.1"
                     /db_xref="GeneID:682964"
                     /db_xref="RGD:1592780"
                     /translation="MAESQELFCSKEARLRPSDSAQVPRALPMEETSVTWSLLPLQNP
                     MAVATHRNLVQVPLISEPVMEVGLDVSFEDVTIHFSQEEWVLLDKAQRLLYCNVMLEN
                     LALVASLGSCTGMGSKEVTCEPNAPAEGVVCNKSPIPQESHLFEIPVPALEDIVHQTE
                     FLSTHPVLTLGSGRTGSCLNEDNNQYQKSYSGGKSCERDPDKASAMSSCISHVLTKPF
                     ICGKDGEEALTSTVCLQQQGACHSEQPSTGCLQQQDTCSNEQPHSSSKSGEALLNGKK
                     HCKGSECQKVSSCTQGLVQCSSASSEKRPSECSKYEKAFSCNYKLAQHQDSHPGQRTY
                     EHTQNEKSFRKKCRLNTQDRICPQERPFKCTECGKAFIYKSELIYHQRHHSGRVHYEC
                     KECRKSFTYKSNLTEHQRIHTGERPYQCEQCGKSFRQNSSLFRHHRIHTGERPYECYE
                     CGKSFRQIFNLIRHRRVHSGEMPHQCGDCGKAFSCKAELTQHERIHSGEKPYECSECG
                     KYFRQFSNLIRHRRVHTGDRPYKCSECEKSFSRKFILIQHQRVHTGERPYKCGECGTS
                     FTRKSDLIQHQRIHTGTRPYECEECGKAFRQCSSLIQHRRVHTGEKPYECIECGKAFS
                     QSASLIQHQRLHTGERPYECSECGKSFSQSASLIQHQRSHSGEKPYECSECGKPFTHK
                     SDLIQHQRVHTGERPYECHGCEKSFSRRSNLVRHQRVHT"
ORIGIN      
        1 tggaaattcg gcatttattc ttattttggg ggtgtatgtc tctctctctc ggtctatgtg
       61 tgtgtgtaag tgtgcgcacg cggttttgtg attcttgtct ggaactggac ttccagcgtg
      121 gcgttcttgg cgatcgtttt ggcgtttctg gggtttgttt acctgacaga agctcggagc
      181 gcggtgggct gttcggatgg cggagagcca agagctgttc tgcagtaagg aggcccggct
      241 gaggcccagc gactccgccc aagtgccccg agccttgcct atggaagaga cctcggtgac
      301 ctggtccttg cttcctctgc agaatccaat ggctgtggcc acgcacagga acctggtcca
      361 ggttccccta atttcagaac cagttatgga ggttggcctg gatgtgtcct ttgaggatgt
      421 gaccattcac ttctcccagg aagagtgggt gctccttgat aaggcccaga gactcctgta
      481 ctgcaatgtg atgctggaaa acttggcact tgtggcatct ctgggttcct gcactggaat
      541 ggggagtaaa gaggtaactt gtgagcctaa tgcacctgca gaaggggtgg tatgtaacaa
      601 aagtccaatt ccccaggaga gtcatctctt tgagatacct gtcccagctt tggaagacat
      661 tgtgcaccag actgagttcc taagcacaca tcctgttctg acattgggct caggcagaac
      721 aggttcctgt ttaaatgaag acaataacca gtatcagaag agttacagtg gaggaaagtc
      781 ctgtgaaagg gatcctgaca aggcttcagc tatgtcaagc tgcatatccc atgtgttgac
      841 caagccattc atctgtggga aggatgggga ggaggccctc acctctacag tctgtcttca
      901 gcaacagggt gcttgtcata gtgaacagcc ctccacaggc tgtcttcagc agcaggacac
      961 ttgtagtaat gaacagcctc acagcagcag caagagtggg gaagcacttt tgaatggaaa
     1021 gaaacattgt aagggcagtg aatgccaaaa agtttcaagc tgcacacagg gacttgttca
     1081 gtgttcaagt gcctcctctg agaaaaggcc gtctgagtgt agcaagtatg agaaagcctt
     1141 ctcctgcaat tacaaacttg ctcagcacca ggacagtcat ccgggacaaa ggacatatga
     1201 gcacactcag aatgagaagt ccttcagaaa aaagtgccgc ctcaacacac aagacagaat
     1261 ttgtcctcaa gaaaggccct ttaagtgtac tgaatgtgga aaagccttta tctataaatc
     1321 tgaactcatt taccatcaga gacaccacag tggtagagta cactatgagt gtaaggaatg
     1381 tagaaagtct ttcacctaca aatccaacct cactgaacac cagagaatcc acactgggga
     1441 aaggccttat cagtgtgaac aatgtggcaa atccttcaga caaaactcta gcctctttag
     1501 acaccacaga atccatactg gagaaaggcc gtacgagtgc tatgaatgtg ggaaatcctt
     1561 tagacagata tttaatctca tcagacacag gcgagtccac tctggagaaa tgcctcacca
     1621 gtgtggcgat tgtgggaaag cctttagctg caaagctgaa ctcactcaac acgagcgaat
     1681 tcatagtggg gaaaagcctt atgaatgcag cgagtgtgga aaatacttca ggcagttctc
     1741 caacctcatt cgacaccgga gagtacacac tggtgacagg ccttataagt gcagtgaatg
     1801 tgagaaatcc ttcagtcgca aattcatcct catccagcac caaagagttc acactggaga
     1861 aaggccttac aaatgtgggg agtgtggcac atccttcacc cggaaatctg acctcatcca
     1921 acaccaacga attcacactg gcacgagacc ctatgagtgt gaagagtgtg ggaaggcatt
     1981 cagacaatgc tctagcctca tccagcaccg aagagttcat actggagaaa agccttatga
     2041 gtgtatcgaa tgtgggaaag cctttagtca gagtgctagc cttattcaac accagcgcct
     2101 gcacactgga gaaagacctt atgagtgtag tgaatgtggg aagtccttta gccagagtgc
     2161 tagcctgatt caacaccaga gaagccacag tggagaaaag ccttatgaat gtagtgaatg
     2221 tggcaagccc ttcacccata agtctgacct gattcagcac caaagggttc acaccggaga
     2281 aagaccttat gagtgccatg gctgtgagaa atcctttagc cgtagatcga atcttgtccg
     2341 acaccagcga gttcacacct aagaagagtc tttatcatgt aagaaatgtg ctgcttagga
     2401 tgttctttat cacagtacat aggcaaaaaa tgcatgaaga tgtatgcctg ctcctgattg
     2461 ggcaaggctg gtaggtatgc agccttgtgg gttttgcttt tataagcacc tgactaacat
     2521 aaattggtgc cattctctga gcatcccagg taagtacctg gccagtgtcc atcatcctgg
     2581 ccagtattta ataaaacttc tttcaaattt ggctccaaaa aaagtgctga tttacaagtg
     2641 tagtaacact ggggtagact cacagccctc tctgagttca aagattcatt taagtttcag
     2701 aagtggaggt tatttcagat atgtgggaaa ctttgaggag actcattcca gtttttagta
     2761 tgcccagggt catgtccaga tttatacctt ttgcagtgtc tgtggtagaa accctgttac
     2821 tcttagcacc tggaggatta ggaggctgac tgtccctgct gagtgcttag cgatgcagac
     2881 ctctttacac tgctccggcc ttagctttgg agacccctcc tttccttaca gggtggtaat
     2941 cttatttaga aagtgtggtt tgagttgtgc tttcaacttt gctaggaagg ataaccttgt
     3001 tcaggacaga ttttgttctc acaccttgct cctgatgaat atttccaggc tggaacccac
     3061 caacttgtga gatgctttac tctcacctaa cttttgaaaa gggagtttgt ttatgctcct
     3121 ttgatcttaa acgttctgct cactctgtgc tgtgacttac cagccgacct gtgatgtcag
     3181 catgaagggg tggaccaatt tcatcgattt cctcactttc tgtttgaagc agctgtgtgg
     3241 agtattggtc taattttcat ggctgcacct accctcacag gaaagacttt tttgggtttt
     3301 gtgttcctga cttactgaag tgattatgat ttttgagagg taagaagtct tcacgaagag
     3361 gtgtgttatg acaaccccag gtacttctgt gccacctgaa caattctgtc cacttttcca
     3421 ccaggatgtc acataattcc tagcattgct gagggtagtc tcttctgctg gccttgtact
     3481 ggagccgttg gctatgtgct gaatagtgta tagggtagca gtttgtgatt aggacaggaa
     3541 ctgagttaat ggatgcaaag ataatactgc atttctttat tatgcatata tgtggcttgc
     3601 ttcacatgga ctgtagtact tgtatggagg tcagaaggca gcttttggag ttgattctat
     3661 tctaccatgt gggctccaga gattgcattc aggtcattag ccttttggtg agccctttca
     3721 cctactgagc caactctctg accctggaac atgcttctat taaaagttca cccacagatg
     3781 ctctagtcat tttgtgtgag ttgacaaatt ctcaagctct ttttagctat ttcctgtggc
     3841 tctggttttt ttgtcagaga aaacagtgaa atgattttgt ggattcctat attcccccag
     3901 ttctgccata ggccaaagtt gttcaatcag aaaaacaagg tgaggaagaa gattctgtgg
     3961 ggtggggtat aattctgacc ttacttgtga tttgaagggt agtaactttt attacttacc
     4021 aagactggct gtcggtggag caaggctatg attctcagat tctgagtaga aagatgatgg
     4081 aacccatatc aggttgtgaa aatgttttga gaacagcagg gcatctaggt atactgtttt
     4141 gggctagttt tcacggcatt atttctgtat catctgcatg attgatactt aaaggacata
     4201 gcatggcact gtggcatgtg cttggagttc aaatttctag aaaggcagaa gaatgaggag
     4261 tctatgagcc caggagtttg tggctcattg ggagcaacat aacatgactc tatctcaaaa
     4321 acaaaacctc aatttggtaa agccttgaaa tcattacagt tataaaagcg aatttacctg
     4381 tcatctatat atttataatg tgccccttta ttagcatttc ctacctctcc tggaaaccag
     4441 tgattttgtt tttaaacttt aacttttagg tgtatgggta ttttctctgc atgtatgtat
     4501 atgtgcctag tgcttgggag gccagaagag ggagaaggac tggagttaca aatagttgtg
     4561 ggccatcgtg tggatattgg gaactgaatc caggtttcgt ggaagaacat ctagtggtct
     4621 caactgctga gtcacatctt cagactctgc tttttcttaa gcaacatatt agtttacatg
     4681 atttagaatt ttaaattatt gccttcaaaa cgtgaatgct tatatatgta tatatatatt
     4741 atatcttgta taattacttc aagattcaac agtgatgctc atatgaaaac ttgttactat
     4801 tgctgaatag tgttttgtat ggctcaacta atgtttgttt attaatttat ttaaaaaagt
     4861 ttctttatag atttttcata tgacaaaggc tgctgtgaat atatatgtca gttttatata
     4921 gttatgcatt ttaagcacct tttgttaata actcaaattg taatatagga gttatagatg
     4981 aatattttaa gaacaattta ggaaatgcca actgtgatgt gtttgctccc ttttgcattc
     5041 ccaccagctg aacgtgaaag tggctgtttc tctccatcct gacgtgttca ctatatgaat
     5101 agtcctttaa gattttatcc catttggtga gtttactgtg actatgtatt tcaatgtatt
     5161 tccttaagta ttctgaaata aaacacattt ttcatgtgct taattgccgc atctgtaata
     5221 aaatgactat gtatttttat tttccttc
//
