LOCUS       XM_017590071            8177 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 536 (Zfp536),
            transcript variant X6, mRNA.
ACCESSION   XM_017590071
VERSION     XM_017590071.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 21, 2021 this sequence version replaced XM_017590071.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8177
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..8177
                     /gene="Zfp536"
                     /note="zinc finger protein 536; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 18
                     ESTs, 24 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 10 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:292820"
                     /db_xref="RGD:1563363"
     CDS             1264..5415
                     /gene="Zfp536"
                     /codon_start=1
                     /product="zinc finger protein 536 isoform X1"
                     /protein_id="XP_017445560.1"
                     /db_xref="GeneID:292820"
                     /db_xref="RGD:1563363"
                     /translation="MEEASLCLGVSSTAPEAEPHLSGPVLNGQYAMSQKLHQITSQLS
                     HAFPELHPRPNPEEKPPAALEEKAHVPMSGQSMGSQMALLANQLGRDVDNSLNGRVDL
                     QQFLNGQNLGIMSQMSDIEDDARKNRKYPCPLCGKRFRFNSILSLHMRTHTGEKPFKC
                     PYCDHRAAQKGNLKIHLRTHKLGNLGKGRGRVREENRLLHELEERAILRDKQMKGSLL
                     QPRSDLKPLAHAQQAPLATCNLTLPPNHSVPDVAHPAPSPKPANLQEDSVTPAAGFRC
                     TFCKGKFKKREELDRHIRILHKPYKCTLCDFAASQEEELISHVEKAHITAESAQGQGP
                     NGGGEQSANEFRCEVCGQVFSQAWFLKGHMRKHKDSFEHCCQICGRRFKEPWFLKNHM
                     KVHLNKLSVKNKSPTEPEVSVPMGGLSQEAHANLYSRYLSCLQSGFMAPDKASLNEPS
                     QLYGKGELPAKEKEVLGKLLSPISSMAHSVPEGDKHSLLGCLNLVPPLKSSCIERLQA
                     AAKAAEMDPVNSYQAWQLMARGMAMEHGFLSKEHQLTRNHEDPLANAGVLFDKEKREY
                     VLVGADGSKQKMPADLVHSTKVGNQRDLPNKLDPLEGSREFLSHGLNQTLEYNLQGPG
                     NMKEKPTECPDCGRVFRTYHQVVVHSRVHKRDRKSDEDALHVGVGLEERRGSGSDQES
                     QSVSRSTTPGSSNVTEESGAGGGLSQTGSAQEDSPHPSSPSSSDIGEEAGRAGGVQQQ
                     ALLRDRNLGSAMKDCPYCAKTFRTSHHLKVHLRIHTGEKPYKCPHCDYAGTQSASLKY
                     HLERHHRERQNGAGPLSGQPPNQEHKDETSSKAPMFIRPDILRGAFKGLPGIDFRSGP
                     ASQQWTSSSMLSSGDHSGQATGMSSELSSDALKASDLPSKSSHFSEIGRAYQNVVSNG
                     VNFQGSLQAFMDSFVLSSLKKKDMKDKVPSEAHSMKAHTAEGGEEKASVKPSQRKTEK
                     SQYEPLDLSVRPDATTLPGSSVTMQDSIAWHGCLFCAFTTSSMELMALHLQANHLGKA
                     KRKDHPTGVTANCKEQVREAGKVSVLPPIQSNKEMALSSTVGSVLDSAPEKMAQGPAK
                     ETLGDQKSGQWPSHMDPAFCTFPSDFYKQFGVYPTMVGSGGPGSCLNKNPEGKAHPED
                     DAPILIPETANKNTTDDLSDIASSEDMDSSSKGENNEEEEIDTEPEMMSKPLSALSKD
                     GSHEGGESLLPPGAPQPIQGLVSPLAQAAEEQWHGPGILPAQDPSAGLPKPERGPPGL
                     EKPMSMLSVLRAYSADGLAAFNGLASSTANSGCIKRPDLCGHRPFQCHYCPYSASQKG
                     NLKTHVLCVHRMPFDNSQYPDRRFKRSRVDSEASGNFEEAAAVKAGSFAELTDERGKG
                     QEEGN"
ORIGIN      
        1 atcttggtct gagcgagtac agctccctgc ccctgctgtc ccctcgtgtc ctccgcgagt
       61 tgggcagccg tgcgcgccgg ggccttggct ttccccctac agtccctagg tctccaggca
      121 gggcttaggt gaacttgggg tggggtgtgc tttctcacat gtgtgcgtgc gtgtgtacgt
      181 gtgtagaaag ggaggttagc gtggagaccg cagttttctt tctcagtttt taacaactgg
      241 attttgactt tgagaccagc ttcgctcact gcttgggctg ggaggggggg gcgatctttc
      301 cccatcactc acatctttgt tcattgttca ctgagtgcaa ggcaggcgac ttaaagaggg
      361 gaaaaaggag ggagagaaag agagaggcag aggaggggga agaagaagag agaaagaaga
      421 ggggcgtggg gggcacaccc gtgtcccctc ccgggtcgtg ttggagggtg aaatagtaag
      481 cccacgtacg gagggtcgcc aggaaagtgg acattaccgc tttaattaac ttcgagatgc
      541 tccggcggcg ggacctggcg tagccgtgac gcgcccccat aaatctgccg gggctgctcc
      601 aagaactcat acagtagcag cgtcagattc aacgcgcgcc tcccccggcc ggagtccatt
      661 tgcataattg gatttttttt tgcctccttc ctccctgaaa cttatttgaa aacccaagtg
      721 aaaaccgcga cgacctgcac actcaaaagc aagtgccaag taagtgccct gcggtggcct
      781 ccacgctccc cgaggtgagg acgcagtgct ggggacgagt gcccggccgg ctcgggtgag
      841 agtgtgcagc gggcgggaga attgcatctg ctgggctgga tgttcgagga acttttttgt
      901 tttgtttttt tttgctgctt tttaaaaaac acaactccca catccctgtt tctccacttt
      961 tctggcgagg tgaggtaact gggccacgcg caaagttaag ttcccgaagg ccacggcttt
     1021 aagagcatcc tacacaccaa gacgaaactc cgtggcttta agacttgcct gggagctggg
     1081 gcccacccct ctggccgtct ttcagcatcc agagtatctt ttctgaggac acattcttac
     1141 tagactgaca gtccttgagt caagcatgca gtgagggtgt taaggaggct ggggacaggc
     1201 tgctggtggc atcgaggcct tgttgtgatt cttgcgggag aaaaatgtct acagtgagaa
     1261 gggatggaag aagcgagtct gtgccttgga gtgtcctcga cggcaccgga agctgagcct
     1321 catctgagcg gcccagtcct caatggccag tatgccatga gccagaagtt gcaccagatt
     1381 acttcccagc tcagccatgc ctttcctgag ttgcacccga ggcccaaccc agaagagaag
     1441 ccacctgcgg cccttgagga aaaggcccac gtgcccatga gcgggcagtc catgggcagc
     1501 caaatggcat tgctggccaa ccagctgggc cgcgatgtag acaacagcct caatgggcgt
     1561 gtggacctgc agcagttcct caatgggcag aacctaggaa tcatgtctca gatgagtgac
     1621 attgaggatg atgcccgaaa gaaccggaag tatccgtgtc ctctgtgtgg caagcgtttc
     1681 cggttcaata gcatcctctc cctgcacatg cgcactcaca ccggtgagaa gccattcaag
     1741 tgcccctact gtgaccaccg cgcggcccaa aaaggaaacc tcaagatcca cctgcggacc
     1801 cacaagctgg gcaacttggg gaaggggcgc gggcgggtac gtgaggagaa ccgtctgctg
     1861 cacgagctgg aggagagggc catcctgcgg gacaagcaga tgaagggcag cctgctgcag
     1921 ccgaggtctg atctcaagcc cttggcacat gcccagcagg ccccgttggc cacctgcaac
     1981 ttgaccttgc ctcctaacca cagcgtgccc gacgtagccc atccggcacc ttcccccaag
     2041 ccggccaatt tgcaggagga ttcggtgacc ccggctgcgg gcttccgatg caccttttgc
     2101 aaaggcaaat tcaagaagcg agaagagctg gaccgccaca tccgcatttt gcataagccc
     2161 tacaagtgca ccctgtgtga cttcgcagcc tcgcaggagg aggagctcat cagtcacgtg
     2221 gagaaggcac acatcactgc ggagtctgcc cagggccaag gccccaatgg tgggggagag
     2281 cagtcagcca acgagttccg ctgtgaggta tgtggccagg tgttcagcca ggcttggttc
     2341 ttgaagggcc acatgcgcaa gcacaaagac tcttttgagc actgctgcca gatctgtggc
     2401 cggcgcttca aagagccttg gttcctgaag aatcacatga aggtccacct caacaagctg
     2461 tcggtgaaga acaaatcccc cactgagcct gaggtgtcgg tgcctatggg tggcctgtcc
     2521 caggaagctc atgccaacct gtactctagg tacctctcct gcctgcagag tggctttatg
     2581 gccccggaca aagccagcct gaatgagccc tcccagctct atggtaaggg agagctccca
     2641 gccaaggaga aagaggttct gggcaagcta ctgtcgccca tttccagtat ggctcacagt
     2701 gtccccgagg gggacaagca ctccctcctg ggctgcctca acctcgtgcc accactgaaa
     2761 tccagctgca tcgagcggtt gcaggcagct gccaaggctg cagaaatgga ccctgtgaat
     2821 agctatcagg cctggcagct catggccagg ggcatggcca tggaacacgg cttcttatct
     2881 aaagagcatc agctcacgcg caaccacgaa gaccctttgg caaacgccgg agttctgttt
     2941 gataaggaga agcgggagta cgtgttagtg ggagcagatg gctccaagca gaaaatgcct
     3001 gctgatttgg ttcacagcac taaagtgggc aatcagagag acctgccaaa taagctcgac
     3061 cctctagaag gcagtcggga atttttgtca cacgggctca accagacgct cgaatacaac
     3121 ctacagggtc ccgggaacat gaaagagaag cccactgagt gcccggattg tggacgggtt
     3181 ttccgaacct accaccaggt ggtcgtgcat tctcgagtcc acaagcggga ccgcaagagt
     3241 gacgaggatg ctctgcacgt gggtgtgggc ctggaggagc ggcgaggctc aggcagtgac
     3301 caggagtccc agtcagtgag ccgctccacc acacccggct cctctaacgt gactgaggag
     3361 agtggggccg gaggtggcct gtcgcagacc ggaagcgccc aagaggatag tccacacccc
     3421 tcttcaccat cttcttcaga catcggcgag gaggccggga gagccggtgg cgtccagcag
     3481 caggcgctgc ttcgagacag gaacctgggc tcggccatga aggactgccc gtactgtgcg
     3541 aagactttcc ggacttccca tcacctcaag gtccacctga ggatacacac aggtgagaag
     3601 ccttacaagt gtcctcactg tgactacgct ggcacccagt cagcgtccct gaagtatcac
     3661 ctggagagac accatcggga gcggcagaat ggagccggcc cactgtcagg acagcccccg
     3721 aaccaggagc acaaggatga gacctccagc aaagcgccta tgtttatcag gccagacatc
     3781 ctgcggggag cttttaaggg tctccccgga atcgacttcc gaagtggtcc tgcctctcag
     3841 cagtggacat catccagcat gctctcctct ggagaccact cagggcaggc cactggcatg
     3901 tcctcagagc tgtcttcaga tgccctaaaa gcctccgatc tcccttccaa aagctcccac
     3961 ttctcagaga tcgggagagc ttatcaaaac gttgtgagca acggtgtgaa cttccaaggg
     4021 tccctgcagg cattcatgga cagctttgtc ctcagctctt tgaagaaaaa ggacatgaaa
     4081 gacaaggtcc catccgaggc ccattctatg aaagcccaca ctgcggaggg cggggaggag
     4141 aaagcaagcg tgaagccctc ccagcgaaag actgagaaat ctcagtacga gcctctggac
     4201 ttgtccgtgc ggccggacgc caccactctc cctggctcct ctgtgaccat gcaagacagc
     4261 attgcgtggc acggctgctt gttctgcgct ttcaccacct cgtccatgga gcttatggcc
     4321 cttcacctcc aggccaacca cctcggcaaa gcgaaacgca aagaccaccc caccggggtg
     4381 acagccaact gcaaagaaca ggtgcgggag gccggcaagg tctccgtgct gcctcccata
     4441 caatcaaaca aagagatggc cctttccagc actgtcggca gtgtgctcga ctctgcaccc
     4501 gagaagatgg cccaaggacc ggccaaagag actctagggg accagaagag cggtcagtgg
     4561 cccagtcaca tggaccccgc cttttgtacc tttccatctg acttctacaa acagtttggc
     4621 gtttacccca ccatggttgg ctcagggggc cccggctcct gcctcaacaa gaatcccgag
     4681 gggaaagccc acccggaaga tgacgccccg atcctgatcc cggaaaccgc aaacaaaaac
     4741 actactgatg acctctcgga tattgcctcc tccgaggaca tggactcctc ctccaagggg
     4801 gaaaacaacg aggaggagga gatcgacacc gaaccagaga tgatgagcaa gccactgtct
     4861 gctctcagca aagatggcag ccatgagggc ggtgaaagcc tgctgccccc aggcgccccc
     4921 cagcccatcc agggactggt ctcaccttta gcccaagcag ccgaggaaca gtggcacggc
     4981 ccaggcatcc ttcctgccca ggacccctcg gccgggctgc ccaagccaga gcggggtccc
     5041 ccgggcttgg agaaacctat gagcatgctg tcggtcctca gggcctacag cgccgatggc
     5101 ttagcagcct ttaacgggct tgcaagcagc acagcaaatt ctggatgtat caagaggcca
     5161 gacttgtgtg gtcacaggcc tttccagtgt cactactgtc cctacagtgc ctcgcagaag
     5221 gggaacctca agacccatgt cctctgcgtc catcgtatgc cttttgacaa cagccagtat
     5281 cctgaccgca ggttcaaacg ttccagggtt gactcggagg cttctgggaa tttcgaggag
     5341 gctgcggctg tgaaggccgg gagctttgcc gagctcacag atgagagagg caaaggccag
     5401 gaggaaggca actgagcaga gccgtccacc acgacactcc tctctacagt tttaaatcac
     5461 gcatctgggc tcaccagttt gctaactgca ttccaagggg gaaaaatcat gtacaacccc
     5521 tcactagtgt atagaacgtt taaaagaatt ttaaaagata tctatctata tatatattaa
     5581 aaaaaatccc ccagcccttg aacatggctg ctacactgtt acccagtaac aagaacttcc
     5641 aagaaatgca ggtgggagaa agagatttta gaaatggccc ctgtgtcctt caagctctga
     5701 tagctggagg tccttctaac ccaagagtca tctttgtcca aataacccca aacaaacaaa
     5761 caaacaaaca aaacaaaaca aacaacaaac caacagctat accattcgag tgatttatcg
     5821 tctcctcgaa ggttctgtgt tctccttctt aaaaacacct ctataacctg acaccggctg
     5881 ccgtcattca cccaccgtcc taatgagagg agctgggagg tagctgaggt gccagtcaga
     5941 ctggggcggt cactgcaggg aaatcaattc acatggtgtc actctgcact ctgggagaaa
     6001 tcctagccgg ccccgcatgc agtcagggag cgccaggcct gaccagcgct gcagaggctg
     6061 gtaatctaaa gtgtgcttaa aaaaaaaaaa aactacacag ccggatgaat cagtggtcag
     6121 gaagtgtctg cagacacttt gatgaatcat tccttttttt ttcttttttt cttttctttt
     6181 tctttttttt tttttaaata tcgagttgca gtacagaaag aaatgcattt cattttatta
     6241 ttttctgtcc tggagaagtt ttgatatcaa aaacaaattg taggaaacat tctagaaact
     6301 gttactagga agccagaaca actctactct ctgtagaaag ttctggtgac tgacagcaat
     6361 ttgtttgcta atgggaaggc tgccttagat tgtgtttaaa aacatttttt tttattttac
     6421 taaaatgaag tctaccctgg cccttgttac tagatttctt ctttcatgtg ttatttttta
     6481 agtgttgtgg gcatgaatca agattttttt cccctccagt gagctcttcg aacgtaactt
     6541 gtattaaaac acgaaccaaa cgcccagagg tctgtcacta atgaagaaaa cagtttgagt
     6601 tagaatgttc atttctttga aacaaatgtg ttctgtattt ctgtagattg tagtgatttg
     6661 aacactcaaa ttttaccaag ctctgcacca cactgatgga gattttgagg gttgacaaga
     6721 aaacactcag ttcacaaaac aaaacaaaca aacaaaaaat aaaaaaaaca aaaggtataa
     6781 gaaaagtctc agaaggattc ttctggaatc cggtagaatg ctgtcaaagt ccccgcctgc
     6841 cttctaacac acttcctttg agtgacatgg aattggtact gttgcttgtg acggtggaga
     6901 cgtagtgagg tattaacttc gaaaacgaaa tcatttagac ttggagagag agagagagaa
     6961 aaaaatgtca ataattcctt ttagtctggg agcacactat aaaaccccag ggccttaaaa
     7021 acttcaactc tgcctatagc agtttacaaa agtactaagc tgcaatcaat gtaaataaaa
     7081 ttcttagcac tatcctgaga ctgaatttca ggctaataag gaatccggtt tgcatatgct
     7141 gtcgaaaggg tgtcatccga cctgggtttc actgggaatg cagccgctgg gcagcgtgga
     7201 cccatctggc atagagcaag ctgctttctt gctggtgttt gtttttcctt ttcttttctt
     7261 tttcttttct ttctttctct tttttttctt tctctgcccc ttctctagaa tagttctcac
     7321 tgccttactt aacccgagtt gatggactgt ggctgtctct ctgtggtcca caggaggcct
     7381 ggagacgctg gtggaaaaac cgtctgaccg tagtgagcat ttagggtttt aactgcactg
     7441 ctgtgtttgg tgattgtgcc agtggcttgc tttctgtgtg tttgccccac ctgtggtatc
     7501 ttagcaaaga aaacttaaaa aaaaataaaa gaaaagaaaa aaataataaa aaggaaaaaa
     7561 agtgggaaaa aaaaaagaga gagcaggaga gagatccaca ttccgtgtct agcactttgg
     7621 cgctggtgca gcatcttttg tgccctccaa gcatcctccg atgctacagg caataattct
     7681 gtttgtgaca ctgggagcac cctccccttc tttgtggcgt gcgtgttgat cccattttgt
     7741 cctgtcctac tagctgcccc ccaccccctt tccctctgac acaggctttc tttccggaac
     7801 atttgtgact tgtaacacaa gcccgtggca gcctctgtga tgcagcgtca gcgtcgcgtg
     7861 tcaccaggct ctcctatccg cacatctcag ccctcactcc ccccaccccg tgacttctgt
     7921 agtctgtgac gctgtcccca gccccgtcta cattctatct tggaggaact ctgagatcat
     7981 agagtagagg agtttgtcgc tatgcttgta acaagtagaa cactttgtat ttaaagttta
     8041 ttcttggtca ttatttatta ttataataca tcagttgaca gaactttatt ctggtataga
     8101 aagtattaaa agttgttttt ttttccagcg atgactgttt tcctttctgc tgttaggaat
     8161 aaaatgtctt tgaagca
//
