LOCUS       NM_001107468            2587 bp    mRNA    linear   ROD 29-MAR-2024
DEFINITION  Rattus norvegicus zinc finger protein 53 (Zfp53), mRNA.
ACCESSION   NM_001107468 XM_001054546 XM_039110840 XM_218041
VERSION     NM_001107468.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2587)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On or before May 26, 2021 this sequence version replaced
            XM_039110840.1, NM_001107468.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643293.1167.1,
                                           SRR26643298.1117.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-201               JAXUCZ010000001.1  69956965-69957165
            202-292             JAXUCZ010000001.1  69959154-69959244
            293-384             JAXUCZ010000001.1  69976964-69977055
            385-511             JAXUCZ010000001.1  69981072-69981198
            512-2587            JAXUCZ010000001.1  69984080-69986155
FEATURES             Location/Qualifiers
     source          1..2587
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q12"
     gene            1..2587
                     /gene="Zfp53"
                     /note="zinc finger protein 53"
                     /db_xref="GeneID:308236"
                     /db_xref="RGD:1308573"
     exon            1..201
                     /gene="Zfp53"
                     /inference="alignment:Splign:2.1.0"
     exon            202..292
                     /gene="Zfp53"
                     /inference="alignment:Splign:2.1.0"
     CDS             259..2154
                     /gene="Zfp53"
                     /codon_start=1
                     /product="zinc finger protein 53"
                     /protein_id="NP_001100938.1"
                     /db_xref="GeneID:308236"
                     /db_xref="RGD:1308573"
                     /translation="MEREETVAKDPGPQAGYSLFFKEKIKEETRKEMADSPLIMSQRL
                     LTFGDVAVDFPQEEWECLDSAQRALYIDVMLENYSNLVSVENYCICETVHQHVKTEKE
                     SCQCNELGEMLRGPSNCALYKRSDAIETSNNYRCCKDRGASVDSSEPGQHTSTHTGEE
                     PCESKNCEKSFNLCSNISQDANKLQSQGKYDEFSSAYSLMQQTIYIGDTPHQCEKCRK
                     CFSTASSLTVHQRIHTGKKPYKCNVCHKSFTQCTNLKTHQRLHTGEKPYKCKDCGKSF
                     PQLSALKSHQKMHTGERPYKCKECDKSFAHCSSFRRHQKIHSAEEYYTCQQCGKVLHQ
                     LSHLRSHHRLHTGEKPYKCSECDRSFTHYASYRRHQKTHSLEKFYKCKECGKSFLELS
                     HLKRHYRIHTGEKPYKCEVCDKSFTVNSTLKTHQKIHTGEKPFKCRECDKSFTKCSHL
                     RRHQSVHTGERPYKCKECDKSFTECSTLRAHQKIHTGEKPYKCRECNKSFIQRSNLRI
                     HQRVHTGERPYVCKECGKSFTKCSTLQTHQKIHTGEKPYKCRECNKSFTQDSHLRTHQ
                     RVHTGERPYICKECGKSFTRCSYLRAHQKIHTGEKPYKCKDCDVSFMQISNLRRHQRV
                     HTGEKLL"
     exon            293..384
                     /gene="Zfp53"
                     /inference="alignment:Splign:2.1.0"
     exon            385..511
                     /gene="Zfp53"
                     /inference="alignment:Splign:2.1.0"
     exon            512..2587
                     /gene="Zfp53"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tgagcttaag aaattgagac tatagagtca gagccagaag tgtcattttc cgacctaggg
       61 cctgcaccgt gcggagagca cagggcccgt gtctcgcggg acccgtgaac tcccctaagt
      121 cactggtacc aggaggggta tcctgggaga atcagcaact catcgacagg aaccccagcc
      181 cagcggccct ggaaccccca gggctcactg accacctaga cctgctctcc tgtggtacag
      241 aacaaagaga cctggacgat ggagagggaa gagacagtag ctaaggatcc agggccacaa
      301 gccggctatt cattgttctt caaagagaaa atcaaagaag aaacacggaa agaaatggct
      361 gattctccat taatcatgtc ccagcgtctg ttgacatttg gggatgtggc tgttgacttc
      421 ccccaggagg agtgggaatg cctggactct gctcagaggg ctttgtatat tgatgtgatg
      481 ttggagaatt acagcaacct ggtctctgtg gagaactact gcatatgtga aactgtccat
      541 caacatgtga agactgaaaa ggagtcttgt cagtgtaatg agcttggtga aatgcttcgt
      601 ggtccctcca actgtgcact ttataaaaga agtgacgcta tagaaacctc taataactac
      661 agatgctgta aggacagggg tgcctctgtt gactcatcag agccaggtca acatacaagc
      721 acgcacactg gagaagaacc ttgtgaatct aaaaactgtg agaaatcttt caatttgtgt
      781 tccaacatta gtcaagatgc aaacaagctg cagagtcagg gaaaatatga tgaattcagc
      841 tctgcataca gtctcatgca acaaacaatc tacattggag atacaccaca ccaatgtgag
      901 aaatgcagga aatgcttcag taccgcctca agcctcactg tacaccagag aattcatact
      961 ggaaagaaac catacaagtg caatgtttgt cacaaatcct ttacccagtg caccaatctt
     1021 aaaacacatc aaagacttca cactggcgag aagccttaca aatgcaaaga ttgtggcaag
     1081 tcatttcctc agttgtcagc acttaagagc catcagaaaa tgcatactgg agagagaccc
     1141 tataaatgta aagagtgtga caaatccttt gctcactgtt ccagtttcag gagacatcag
     1201 aaaatccata gtgctgagga atattatact tgtcaacaat gtggcaaggt cttacatcag
     1261 ctttcacacc ttagaagcca tcacagactc catactggag agaagcctta caaatgcagt
     1321 gagtgtgaca gatcctttac ccactatgct tcctacagaa ggcatcagaa aactcattct
     1381 ctagagaaat tttacaaatg caaagaatgt ggtaagtcct ttcttgaatt gtcacatctt
     1441 aaaaggcatt acagaatcca cactggtgaa aagccttaca aatgtgaggt atgtgataaa
     1501 tcctttactg ttaattctac tcttaaaaca catcagaaaa ttcatactgg agagaaacct
     1561 tttaaatgta gggaatgtga taaatctttt accaagtgct cacatcttcg aagacatcag
     1621 agtgttcata ctggagagag accttacaaa tgtaaggaat gtgacaaatc ttttactgag
     1681 tgttcaactc ttagagcaca tcagaaaatt catactggag agaaacctta caaatgtaga
     1741 gaatgtaaca aatcctttat ccagcgttca aatcttagaa tacatcagag agttcatacg
     1801 ggagagagac cttacgtatg taaagaatgt ggcaaatctt ttactaagtg ttcaactctt
     1861 caaacacatc aaaaaattca tactggagag aaaccttaca aatgtaggga atgcaacaaa
     1921 tcctttaccc aggactcaca tcttagaaca catcagagag ttcatactgg agagagacct
     1981 tacatatgta aggaatgtgg caaatctttt actaggtgtt catatcttag agcacatcag
     2041 aaaattcata ctggagagaa accgtacaaa tgcaaagact gtgacgtatc ctttatgcag
     2101 atttcaaatc tgagaagaca tcagagggtt catactggag aaaaactatt gtaactattg
     2161 tgacatagca tttatctgat attccttgct tacaaatcac aacagtataa gtaatagaaa
     2221 cataaaaata acaagttctg aatgccttta atgagcattt aaaactttaa aataaataag
     2281 agtttatttt aacataaaat tctgcaatta taactgtggg aaaagttctt gtgtatgttt
     2341 gccaggactg caagtttgtt ctgtgcacta catgtatgcc tggtacaggt agaagccaga
     2401 agagagcatc tgatcccctg aagttggcag tatacctagt tgtgtgtcgc tatatttatg
     2461 ttggaaattg aactcccgtt ccctctaaga gcaaccagtg cttttttttt aattagatat
     2521 agctctttat ttatatttca aatgttatta ttccctttcc aggtttcctg tccataagcc
     2581 ccatccc
//
