LOCUS       XM_017599488            4156 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 518B (Zfp518b),
            transcript variant X2, mRNA.
ACCESSION   XM_017599488
VERSION     XM_017599488.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051349.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_017599488.3.
            
            On Jan 21, 2021 this sequence version replaced XM_017599488.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4156
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4156
                     /gene="Zfp518b"
                     /note="zinc finger protein 518B; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 EST,
                     3 Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 3 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:498390"
                     /db_xref="RGD:1564150"
     CDS             801..4034
                     /gene="Zfp518b"
                     /codon_start=1
                     /product="zinc finger protein 518B isoform X1"
                     /protein_id="XP_017454977.1"
                     /db_xref="GeneID:498390"
                     /db_xref="RGD:1564150"
                     /translation="MQLREMKDIGEQLYTTQVNGGPSSLTMSPKQPNRATRPERQEAQ
                     TLLYQGSEAEAATMTIATCVQCKSIHKIPTQDLRKGPGQGQDTYVCFKCSLRAVPTQL
                     HFVNNNAGAAHIRNETETISSPVNKFKVRNFKPGKYYCDKCRFSTKDPLQYRKHTLQH
                     EEIKFICSHCSYISYTKGEFQRHLVKHTGIFPYRCEYCDYGAIRNDYIVKHRRRVHER
                     AGAKRPFKTVAKLEPKRTNISKQSMELSKAPSPRAAFQNKLSDQLSRFSLHASKDKTH
                     NMMLLPELKKYQKDVVCIPNKVTLCEPREVSLLGNKNVEVEVLSPSKEPVQPGLPLTV
                     MAPSELVVPTNCLAQLMDVKVVNGTQQLVLKLFPLEENSRLETSRGDGGVSECTTTEK
                     GSGGQTKVLSTEASRSLAMEGNAGEFVGLDRLHSLVQKQLKNVKWVKSCNFFMPNSGI
                     HSHQDSFLGPDTIKDLQKSHSLCPPRALPSASVKSHSPASVQSSVSYGPGATVSRFLT
                     KAAAAFAEDGRGSRSDSQQLLPLASLSSKVSFSGEKGLLPLGENDLEARNRTSRPETV
                     VSSDRKLEDKPMESKAVGSTSQVSSVQKKEYLHINFAGEDKTRSQQPGGRPVLPKTSE
                     TAGNAFEGPIISSVFSLSSGSENVPEGIKWNSSTTKIKSIELLRRKIAQLIESCGKPS
                     SLSAGSPQRRPIGQAPKLTSKATPKAIQEMSGSLTGPGPSVGPLQKPQNEDSITGSGQ
                     HAPQQMCPPFVSANDGKTESRVTRKTPVATPVLIPKGAVLRVLNSSEDARIIEATCDT
                     PVSIPCSEAQLAGTLPFCPVKQPGSGSQLLPCRSGPADLSPSLETSLRPKSRKEDPIC
                     SVTPKKIIPVYSTVPGSSDSSRQGRPVSRNLTVSKNKTKQVSSAKKKNKMQANPSRYF
                     KDPSFFQVARQLRLIAAKPDQLIKCPRRNQPVIVLNHPDVDSPEVTNVMKVINKYKGN
                     VLKVVLSERTRCQLGVRRYHMRLTYQNVAETNHMKRQMMLKMKLKKVHKNNYQVVGSL
                     PDDPAQCVFKCWFCGRLYEDQEEWMSHGQRHLIEATRDWDVLSSKGK"
ORIGIN      
        1 tccagcagct ccaggagttg aacctttgga tgcactcgga gagcctggaa ccccacgtcc
       61 tagcggaaga gggcagccgg aaggtggtcc acacacccga cgcctgaaca tccccaaggg
      121 aaaatctgct cctaggaaca atgaatgtct caaagacccg agctaacttg cccagggtca
      181 catatctggg gacagagtct acagctccta ttccccacaa cttacagaaa agtcgctacc
      241 attgagcagt aggtctgtgg tgtggcaact taaggacctg ggcggaaagg gcctttgtat
      301 ctctttcaag ggcctgttgg cgcagccctg gcttctgggc ctagatgtct acaccacggc
      361 ccgaagtcct gagacgtgtg gtgctcagtg gctaataagg ccgggaagat aagagccaga
      421 gacttaccac acacttgact tctgggcctg gacgagcagt gcccaagagg ccaggaatcc
      481 tggctgtgac ctcagctcac aagacgaagt tttaactgga tgctgcctgc caccactttc
      541 cacctcagtg tgacctagaa aagccacata ccgtctcccg gcccttcggt tttaaaagaa
      601 gcagtgttgc ctggagacag aattgaaagc agtcatagtg tggctcacac atcctgtgaa
      661 aggacacaaa acgtgattga tcattaagta ttcaccaaga agtgcctgct gctccaccag
      721 tccctgtgtg tggaaggatg cccatccgag gagggtttca ttgagtgacg tctttctgag
      781 tttcagtttg caatgtgcat atgcagttaa gggagatgaa ggatattgga gaacaactgt
      841 ataccacaca agtgaatggg ggacccagtt ccttgaccat gtcccccaaa caacctaata
      901 gagcaactcg gccagagaga caggaagcac aaaccctatt gtaccaaggt tcagaggcag
      961 aggctgccac aatgaccatt gctacttgtg tacagtgcaa aagtattcac aagatcccca
     1021 ctcaagactt gaggaagggc cctgggcaag gccaagacac ttatgtctgc tttaaatgca
     1081 gccttcgagc ggtgcctacc cagctgcatt ttgtgaacaa taacgccggg gccgctcata
     1141 tcagaaatga aacggaaacc atctcaagtc ctgtaaataa atttaaggtt aggaacttca
     1201 agccaggcaa atactactgt gataaatgtc ggttctctac aaaggacccg ctgcagtaca
     1261 gaaaacacac tctgcaacac gaggagatca agttcatctg ttctcactgc agctacatct
     1321 cctacacgaa aggggagttt cagaggcatc tggtgaagca cacaggcatc ttcccctacc
     1381 gatgtgagta ctgcgactat ggtgctattc gcaacgacta cattgtcaag cacaggagga
     1441 gggtccacga gcgggctggt gccaaacggc cattcaaaac tgtagccaaa ctggagccca
     1501 agagaaccaa catttcaaag cagagcatgg aactctcaaa ggcccccagt cccagggctg
     1561 ccttccaaaa caagttgtca gaccagctat ctcggttctc tctccatgct agcaaagaca
     1621 agacacacaa tatgatgtta ttacctgagc taaagaagta tcaaaaagat gtagtgtgta
     1681 ttcccaacaa agtgaccctg tgtgagccaa gggaggtgag cctactgggg aataagaatg
     1741 ttgaggtgga agtgctttcc ccctccaagg aacctgtgca gccaggtttg ccgctgactg
     1801 taatggcacc ctcagagctg gtggtcccca ccaactgtct agcccagttg atggacgtga
     1861 aggtggtcaa tggcacacag cagctcgtgc ttaaactgtt tccgttggaa gaaaactccc
     1921 gcctcgaaac aagcagagga gatggaggtg tgtctgagtg cacgactact gagaagggct
     1981 cggggggaca gacaaaagtg ctttccacag aagcctcgag gtcactagca atggaaggga
     2041 atgctggaga gtttgtgggc cttgaccgtc tgcactcttt ggttcagaaa cagcttaaaa
     2101 atgtgaaatg ggtgaagtct tgcaattttt tcatgcccaa ttctggtata cacagtcacc
     2161 aagactcttt cctcggtccc gatacaatta aagatttaca gaagtctcac agtttgtgtc
     2221 cacctagagc ccttccttca gcttcggtaa aaagtcattc tccagcctct gtacaaagta
     2281 gtgtttccta tggccctgga gccacagtga gccgcttctt gacgaaagca gctgctgctt
     2341 ttgctgaaga cggaagaggt tcccgcagtg actcccagca gctccttccg ctcgcctcgt
     2401 tgtcttcaaa ggtttccttc tctggagaga agggcttgct acctttaggt gaaaatgact
     2461 tagaagccag gaataggact agtcgtcctg aaacagtggt ttcctctgac aggaagctcg
     2521 aagacaaacc gatggaaagc aaagcagtgg gaagtacaag ccaggtctcc tctgtgcaga
     2581 aaaaagagta tttacacata aactttgctg gggaagacaa aacgaggtcc cagcagcctg
     2641 gcggtcggcc cgtgctgccc aagacttctg aaacagcagg taatgcgttt gaaggcccaa
     2701 tcatctcgtc agtgttttcg ttgagctctg gatctgaaaa tgtgccagag ggcattaaat
     2761 ggaatagttc aacaaccaaa ataaagtcca ttgaactgct gcgcagaaag atagcgcagc
     2821 taatcgagtc ttgtggcaag ccttcctctt tgtctgccgg tagtcctcag cgacgtccca
     2881 ttgggcaggc acccaagctg acttcaaaag caactcccaa ggctattcaa gaaatgagtg
     2941 ggtcccttac tggtcctggc ccttctgtgg gtcctctgca aaaacctcag aacgaggaca
     3001 gtattactgg cagtggacag catgctccgc agcaaatgtg tcccccgttt gtcagtgcta
     3061 atgacgggaa aacggaaagc agggtgacca gaaagactcc tgttgctact ccagtgctga
     3121 tccccaaagg ggctgtgctg agggtcctta actcttctga agatgctcgc atcatagagg
     3181 ctacctgtga cacacctgtc agcatcccct gcagtgaagc ccagttagca ggaacacttc
     3241 cattctgccc tgtgaaacaa ccaggctcag gttcccagct tttgccgtgc agaagtggac
     3301 cagcagactt gtccccgagt ctggagacat ctcttcggcc caaatcaaga aaagaggacc
     3361 ccatctgcag tgtcactcct aagaaaatca tccctgtgta cagcacagta ccaggaagca
     3421 gtgactcaag caggcaagga aggccagttt ctagaaacct aactgtaagc aagaataaaa
     3481 ccaagcaagt gagctcagcc aagaagaaga acaagatgca ggccaatccc agccgctatt
     3541 tcaaagaccc ttcctttttt caggtggcaa ggcagctgcg actcatagct gccaaaccag
     3601 atcagttgat taaatgtccc cgtcggaacc agcctgtcat cgtgttaaac catcctgacg
     3661 tcgactcccc cgaagtgacc aatgtgatga aggtaatcaa caagtacaaa ggcaacgtcc
     3721 tcaaggttgt cctgtctgag aggactaggt gtcagctggg tgtccggcgg taccatatgc
     3781 ggctgaccta ccagaatgtg gcagaaacga accacatgaa gaggcagatg atgttgaaaa
     3841 tgaaactgaa gaaggttcat aaaaacaact accaggtggt gggctcattg ccggacgacc
     3901 ctgcccagtg tgtgttcaag tgctggttct gtgggcggct ctacgaagac caggaagagt
     3961 ggatgagtca tggccagcgg catttgatag aagccaccag agactgggat gtcctttctt
     4021 caaagggcaa atgagtgaaa cttagtcttt gaaattttat ttccttctag ttttcatggc
     4081 tagggtcaca ccttagaccc ttgatgcagt agaagaaagg gagttgctta ttccttagag
     4141 tcaccatagg aagggt
//
