LOCUS       NM_182823               2111 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus zinc finger protein 472 (Zfp472), mRNA.
ACCESSION   NM_182823
VERSION     NM_182823.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2111)
  AUTHORS   Sigal,A., Milo,R., Cohen,A., Geva-Zatorsky,N., Klein,Y., Alaluf,I.,
            Swerdlin,N., Perzov,N., Danon,T., Liron,Y., Raveh,T.,
            Carpenter,A.E., Lahav,G. and Alon,U.
  TITLE     Dynamic proteomics in individual human cells uncovers widespread
            cell-cycle dependence of nuclear proteins
  JOURNAL   Nat Methods 3 (7), 525-531 (2006)
   PUBMED   16791210
REFERENCE   2  (bases 1 to 2111)
  AUTHORS   Hennemann,H., Vassen,L., Geisen,C., Eilers,M. and Moroy,T.
  TITLE     Identification of a novel Kruppel-associated box domain protein,
            Krim-1, that interacts with c-Myc and inhibits its oncogenic
            activity
  JOURNAL   J Biol Chem 278 (31), 28799-28811 (2003)
   PUBMED   12748187
  REMARK    GeneRIF: findings suggest that Myc-mediated functions can be
            negatively regulated by KRAB box containing zinc finger protein
            (Krim-1)
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000007.1.
            
            On Nov 27, 2020 this sequence version replaced NM_182823.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AY195874.1, SRR26643299.29979.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-99                JAXUCZ010000007.1  12725127-12725225
            100-226             JAXUCZ010000007.1  12730354-12730480
            227-281             JAXUCZ010000007.1  12730661-12730715
            282-2111            JAXUCZ010000007.1  12731565-12733394
FEATURES             Location/Qualifiers
     source          1..2111
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q11"
     gene            1..2111
                     /gene="Zfp472"
                     /gene_synonym="KRIM-1; Krim1"
                     /note="zinc finger protein 472"
                     /db_xref="GeneID:314587"
                     /db_xref="RGD:727944"
     exon            1..99
                     /gene="Zfp472"
                     /gene_synonym="KRIM-1; Krim1"
                     /inference="alignment:Splign:2.1.0"
     CDS             79..1680
                     /gene="Zfp472"
                     /gene_synonym="KRIM-1; Krim1"
                     /note="KRAB box containing zinc finger protein"
                     /codon_start=1
                     /product="zinc finger protein 472"
                     /protein_id="NP_877975.1"
                     /db_xref="GeneID:314587"
                     /db_xref="RGD:727944"
                     /translation="MHRKQEMEPVTFEDVAVNFTLGEWTMLDSSQKKLYRDVMKETFM
                     NLISIGKTEEEDNEEYQNPKGSLRTLMVERLCKYHHGNQYGETQRQSPDHVVSEKMPP
                     AVSECERDILIHLPSDMHFKGQTGEKPCQYQEQMEKTLKHKKCWKDFSYSELLWMHKN
                     PPMKQKPHENKEANEASRSFTSDHDYEGTFTEEKSYICKQCGKAWSDSCSLLWHERSH
                     IQEKRHTCKQCGKAFSRPSQLHKHERIHTGEKPYVCTHCGKAFIDRRTCHNHERTHTG
                     VKPFACKQCGKAFLRSCQLLIHERIHTGERPFVCKHCGKAFTYSSACYYHERIHTGEK
                     PCVCKQCGKAFKCSAYLHIHERSHSGEKPYVCKHCGKAFAYATGCHKHERIHTGEKPY
                     MCVQCGKLFTFPRSLHIHERSHSGEKPYVCKQCGKSFTQGTSLRRHERIHTGEKPYVC
                     RQCGKAFIQRDDCYSHERTHTGEKPFMCVQCGKTFTFSKSLQIHEKNHTGEKPYICKQ
                     CGKAFTCSTYLLRHERTHSEKKLSG"
     exon            100..226
                     /gene="Zfp472"
                     /gene_synonym="KRIM-1; Krim1"
                     /inference="alignment:Splign:2.1.0"
     exon            227..281
                     /gene="Zfp472"
                     /gene_synonym="KRIM-1; Krim1"
                     /inference="alignment:Splign:2.1.0"
     exon            282..2111
                     /gene="Zfp472"
                     /gene_synonym="KRIM-1; Krim1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gctgaaggga ggagagtggt gtttgagctt cccgggtacc tgttctgcat actgcggctc
       61 cgtagggata acgcctggat gcatcggaag caggaaatgg agccagtgac ctttgaggac
      121 gtggctgtga acttcactct aggagagtgg actatgttgg attccagtca gaagaagctc
      181 tacagagacg tgatgaagga gacctttatg aacctgatct ccatagggaa aacagaagaa
      241 gaagataatg aagagtacca aaatcctaaa ggaagcctga gaactctgat ggttgagaga
      301 ctctgtaaat atcatcatgg taatcagtat ggagaaacgc aacgacagag tccagaccat
      361 gttgtgagtg aaaaaatgcc tccagccgta agtgaatgtg agagagatat ccttattcat
      421 ttaccctcag acatgcactt caaaggtcaa actggggaga aaccatgcca gtatcaggaa
      481 cagatggaga agactttgaa acataagaaa tgttggaagg acttcagtta ttccgagttg
      541 ctttggatgc ataaaaaccc tcccatgaaa cagaaacccc acgaaaataa agaggctaac
      601 gaagcttcta ggagtttcac ctccgatcac gattatgagg gaactttcac tgaagagaaa
      661 tcctacattt gtaaacagtg tggcaaagca tggagtgatt cctgtagcct tctctggcat
      721 gagagaagtc acattcaaga gaagcgtcat acatgtaagc agtgtggaaa agcatttagt
      781 cgtccctcac agcttcacaa acatgagaga atccacactg gtgagaaacc ttatgtatgc
      841 acacattgtg gaaaagcctt cattgatcgc agaacctgtc acaatcatga gaggactcac
      901 actggagtga aaccctttgc ctgtaagcag tgtgggaaag cctttcttcg ttcctgccaa
      961 ctcctcattc atgaacgaat tcacactgga gagagacctt ttgtatgtaa gcattgtgga
     1021 aaagctttca cctattccag tgcttgctat tatcacgaga gaattcacac tggagagaaa
     1081 ccctgtgtct gtaagcagtg tgggaaagcg tttaaatgtt ctgcatacct tcacatacat
     1141 gaacgatccc acagtggaga aaaaccctat gtgtgtaagc attgtggcaa agcctttgct
     1201 tatgccactg gatgccacaa acatgaaaga attcacaccg gagagaaacc gtatatgtgt
     1261 gtgcagtgtg ggaaactatt cactttcccc agatcccttc acatacatga gaggtctcac
     1321 agtggagaaa aaccctatgt atgtaagcag tgtgggaagt ctttcactca gggaacttct
     1381 ttgcgaagac atgaacgaat tcacactgga gaaaagcctt atgtatgtag gcagtgtggg
     1441 aaggccttca tccaacgtga tgattgctac agtcatgaac gaactcacac aggagagaaa
     1501 ccattcatgt gtgttcaatg tgggaaaaca ttcacttttt ccaaatctct tcagatacat
     1561 gaaaaaaatc acacaggaga gaaaccctat atatgtaagc agtgtgggaa agcatttacg
     1621 tgctccacat accttctcag acatgaaaga actcacagtg agaagaaact cagtgggtaa
     1681 tgtttctacc agtgtaaatc atagggatgt ctgacgtcaa cttttatttt gaggtatgaa
     1741 ggaaaacgga gagacactgt aagattgtgc gaattgtaga agtataattt tggtcccccg
     1801 tgctctccat aagatgacaa cctgaacagc tggttctact gctgtgtctt gttccagcaa
     1861 tgagaaagga aaggctaggg cagttacaat attcagtgac gcctattctg tttacagggt
     1921 ttgaacacac cttgggaggt ttatgaacca gtttcaagta aataaaattg taaatataag
     1981 aaagttgtgt ttttaccaat aagataaaat ttatgaaatt atctcatgtg gctaagtcct
     2041 atgaaaatac gtgaagatat tgaaggttaa tttgtgttga atgtttctga aaataaacca
     2101 catgaaagag a
//
