LOCUS       XP_038966962            2565 aa            linear   ROD 22-FEB-2024
DEFINITION  zinc finger protein 462 isoform X1 [Rattus norvegicus].
ACCESSION   XP_038966962
VERSION     XP_038966962.1
DBLINK      BioProject: PRJNA1074393
DBSOURCE    REFSEQ: accession XM_039111034.2
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086023) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2565
                     /organism="Rattus norvegicus"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     Protein         1..2565
                     /product="zinc finger protein 462 isoform X1"
                     /calculated_mol_wt=290394
     Region          2052..2072
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(2052,2055,2068,2072)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          2084..2108
                     /region_name="zf-H2C2_5"
                     /note="C2H2-type zinc-finger domain; pfam13909"
                     /db_xref="CDD:404746"
     Region          2086..2106
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(2086,2089,2102,2106)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Site            order(2091,2093,2095,2097..2098,2101..2102,2105,2120,
                     2124..2125,2130..2131,2135,2149,2151,2153,2155..2156,
                     2159..2160,2164)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          2115..2136
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          2144..2165
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          2315..2335
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(2315,2318,2331,2335)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Region          2361..2381
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(2361,2364,2377,2381)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Site            order(2366,2368,2370..2371,2376..2377,2380,2397,
                     2400..2401,2404..2405,2408,2480,2482,2484,2486..2487,
                     2490..2491,2494)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          2389..2410
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          2475..2495
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..2565
                     /gene="Zfp462"
                     /gene_synonym="RGD1562123"
                     /coded_by="XM_039111034.2:2161..9858"
                     /db_xref="GeneID:362522"
                     /db_xref="RGD:1562123"
ORIGIN      
        1 mevlqcdgcd frapsyedlk ahiqdvhtaf lqptdvaedn ddeplsgsvn agnqtevefs
       61 sikdefviae dlsgqsatal gsgsyyghsp gyygqhitpn pkptnkffqc kfcvryfrsk
      121 nlliehtrkv hgaqaeespt gppvpgslny nimmhegfgk vfscqfctyk sprrariikh
      181 qkmyhknslk esaapppapa plsdpvvppv slqdpckelp aevversile smvkpltksr
      241 gnfccewcsy qtprrerwcd hmmkkhrsmv kilsnirqqq egtnvsevqn nnepsptsns
      301 tylsmnaasr empntnvsnf rgsvgnsimr pnssstskfs pmsypqmkpk sphnsglvnl
      361 tersrygmsd mtnssadldt nsmlndsssd edlnevdsen glsvmdhqas glsaeqlmgs
      421 dgnklletkg ipfrrfmnrf qcpfcpfltm hrrsisrhie nihlsgktav ykcdecpftc
      481 ksslklgahk qchtgtsdwd tvnsqsesls sslnegmlsy espsingrks gvmldplqqq
      541 qppqpppplp ppppppsqpv qqppppqlqs phqvppqpqp ppptqqpqpp tqvpplhpyk
      601 ctmcsystmt lkglrvhqqh khsfcdnlpk fegqpsslpl enetdshpss sntvkksqts
      661 ilglssknnf vakasrklan dfpldlspvk krtrideias nlqskinqtk lqedaiinve
      721 ddeeeeddne veieveldre eeptepimdv ptafsaqqiw ardtsesqke anyrsithdy
      781 tatngaeiel tlsedeedyy gsstsikdhq vsnaallntq ppiygtehsn entdfgdsgr
      841 lyyckhcdfn nksarsvsth yqrmhpyikf sfryildpnd hsavyrclec yidytnfedl
      901 qqhygehhpe amnvlnfdhs dliyrcrfcs ytspnvrslm phyqrmhptv kinnamifss
      961 yvveqqegln aesqtlreil nsapksmats tpvargggmp atfnkntspk tftpecenqk
     1021 dpsvntvvvy dcdvcsfasp nmhsvlvhyq kkhpeekasy friqktmrmv svdrgsalaq
     1081 lsfevgapms pkmsnmgspp ppqppppdls ielyyckhcs ysnrsvvgvl vhyqkrhpei
     1141 kvtakyirqa pptaammrga eglqdsprpp apmqlnrsss erdcppvete mffcqhcdyg
     1201 nrtvkgvlih yqkkhrdfka nadvirqhta tirslcdrnq kpascvllpa sgmerdktkl
     1261 ralkcrqcsy tspyfyalrk hikkdhpalk atvtsimrwa fldglieagy hcewciyshm
     1321 epsglllhyq rrhpehyvdy tymatklwag pdpssptltm saeaktyrcr dcafeavsiw
     1381 ditnhyqafh pwamngdesv lldiikekdg vdkallapee ligavncens lpnplpeqea
     1441 ecpedarlsp eksihlasan paisstpyqc tvcqseynnl hgllthygkk hpgmkvkaad
     1501 faqdvdinpg avykcrhcpy intrihgvlt hyqkrhpaik vtaedfvhdv eqsaditqnd
     1561 veetsrifkq gygayrcklc pythgtlekl kihyekyhnq pefdvfspsp pklpvslepe
     1621 ittevspsqv smteeevged pmstahfsts hlvshtvfrc qlckyfcstr kgiarhyrik
     1681 hnnvraqpeg knnlfkcalc aytnpirkgl aahyqkrhdi dayythclaa srtisdkpnk
     1741 viipsppkdd spqlseelrr avekkkcslc sfqsfskkgi vshymkrhpg vfpkkqhask
     1801 lggyftavya dehekpplme eegrsgferp evegeaqdie wlpfrcikcf klsfstaell
     1861 cmhytdhhsr dlkrdfvilg sgprfqnstf qckhcdsklq staeltshln ihneefqkra
     1921 krqerrkqll skqkyadgaf adfkqerpfg hleeapkike rkvvgykckf cvevhptlra
     1981 icnhlrkhvq ygsvpavsaa vkqeaedpsh lfldgfeaar dasgtlvgrv dgghclldgm
     2041 ledetrpggy hcsqcdrvlm smqglrsher shlalamftr edkyscqycs fvsafrhnld
     2101 rhmqthhghh kpfrcklcsf kssynsrlkt hilkahageh aykcswcsfs tmtisqlkeh
     2161 slkvhgkalt lprprivsll sshahhssqk atpaeeveds ndssyseppd vqqqlnhyqs
     2221 aalarnnsrv spvppsgtaa gteqkaeavl hcefcefssg yiqsirrhyr dkhggkklfk
     2281 ckdcsfytgf ksaftmhvea ghsavpeegp kdlrcplcly htkykrnmid hivlhreerv
     2341 vpievcrskl skylqgvvfr cdkctftcss deslqqhiek hnelrpykcq lcyyetkhte
     2401 eldthlrdeh kvsrnfelvg rvnldqleqm kekmessssd dedkddemss ktedrelmrf
     2461 sdrgagvnte krfpcefcgr afsqgsewer hvlrhgmalh dtdqvsrdei htkemvedsm
     2521 qlpsieaked depigidfpl ksetvticvv aadksllena eakte
//
