LOCUS       NM_001419516            1610 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus zinc finger protein 455 like 1 (Zfp455l1),
            transcript variant 1, mRNA.
ACCESSION   NM_001419516 XM_039090462
VERSION     NM_001419516.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1610)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 1610)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Apr 6, 2023 this sequence version replaced XM_039090462.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR22582419.2944577.1,
                                           SRR26360181.2686141.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN12840111, SAMN12840115
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on manual assertion, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-132               JAXUCZ010000001.1  36772371-36772502   c
            133-259             JAXUCZ010000001.1  36765219-36765345   c
            260-355             JAXUCZ010000001.1  36764667-36764762   c
            356-1610            JAXUCZ010000001.1  36755682-36756936   c
FEATURES             Location/Qualifiers
     source          1..1610
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1p11"
     gene            1..1610
                     /gene="Zfp455l1"
                     /note="zinc finger protein 455 like 1"
                     /db_xref="GeneID:680200"
                     /db_xref="RGD:1594231"
     exon            1..132
                     /gene="Zfp455l1"
                     /inference="alignment:Splign:2.1.0"
     exon            133..259
                     /gene="Zfp455l1"
                     /inference="alignment:Splign:2.1.0"
     CDS             136..1548
                     /gene="Zfp455l1"
                     /note="isoform 1 is encoded by transcript variant 1; zinc
                     finger protein 455-like"
                     /codon_start=1
                     /product="zinc finger protein 455 like 1 isoform 1"
                     /protein_id="NP_001406445.1"
                     /db_xref="GeneID:680200"
                     /db_xref="RGD:1594231"
                     /translation="MLSFWDVAIDFSPEEWECLEPVQWNLYRDVMLENYSNLVFLGLT
                     FSKPFLVTFLEQRQGPWDMQRQAAAPVHPGRALSDPDYYSNATQCKSLFVKKQRIYIG
                     GKPYKCEECGKALSSHKTLSIHQRLHTGDKPYKCKECHKSFSSRSSLFIHQKNHTDEK
                     NFKCEECGRSFYYPSMLKQHQRIHSGEKLYKCGECGKAFYDPSFLKQHQRIFCVEKHS
                     KYEECGKVFSSALTLNQHKEIHTGEKPFQCGKCHKAFRHPSALRIHMTVHTGEKPYKC
                     EECGRCYFSSLSLRRHQIIHSEDNSNKCEECGRCFSSSSCLRRHQTIHSEDKTYKCDE
                     CGRYYSSSFSLRRHQVIHSEDNPYKCEECDKRFTYSASLQEHQTIHTGEKPYKCENCH
                     KAFRHHSSLRKHKIVHTGEKPYKCEECGRCFSRYSYLRRHQEIHSEGNPQTCVECGKT
                     FLNVYRLTRHIKVHTREKSY"
     exon            260..355
                     /gene="Zfp455l1"
                     /inference="alignment:Splign:2.1.0"
     exon            356..1610
                     /gene="Zfp455l1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agggagtctt ccgggaaatc ctattctgac ttcaggtgtc tacttgtggg tctttctcaa
       61 agttgggcgg aaagcgtgtg cggctgtaca ttcctgttgt ccggtacttg gaggttggtc
      121 tgggacttgg aggaaatgct gtccttctgg gatgtggcca ttgatttctc tccagaagag
      181 tgggagtgcc tggagcctgt tcagtggaat ctatacaggg acgtgatgtt ggagaattac
      241 agcaaccttg tgttcctggg tctaactttc tctaagccat tcttggtgac attcctggag
      301 cagagacaag ggccttggga tatgcagaga caagcagcag cccctgtgca cccaggaaga
      361 gcactcagtg atcctgacta ttacagcaat gcaactcagt gtaaatcact ttttgttaaa
      421 aaacaaagaa tttatatagg ggggaaaccc tacaagtgtg aagaatgtgg taaggccctt
      481 agttctcata aaacactgtc tatacaccag agacttcata ctggagacaa accctacaag
      541 tgtaaagagt gtcacaagtc ctttagtagt cgctcatcac tgtttataca ccagaaaaac
      601 catactgatg aaaaaaactt caagtgtgaa gaatgtggca gatcatttta ctatccttca
      661 atgctgaagc aacatcaaag aattcattct ggagagaaac tctacaagtg tggagaatgt
      721 ggaaaagcat tttatgatcc ttccttcctg aagcagcatc aaagaatttt ctgtgtagag
      781 aaacactcta aatatgaaga atgtggcaaa gtattttctt ctgctttaac ccttaaccaa
      841 cataaagaaa tccatactgg agagaaaccc ttccagtgcg gaaaatgtca caaagccttt
      901 cgtcatccct cagccctcag gatacatatg acagtccata ctggagagaa accttacaag
      961 tgcgaagagt gtggcagatg ttatttctca tctttatccc ttagacgaca tcaaataatt
     1021 cactctgaag acaactccaa caagtgtgaa gaatgtggca gatgtttttc ctcatcttct
     1081 tgccttagaa gacatcaaac aattcattct gaagacaaga cctataagtg tgatgagtgt
     1141 ggcagatatt attcctcatc tttttccctt agacgacatc aagtaatcca ttctgaagat
     1201 aatccctata aatgtgaaga atgtgacaaa aggtttactt attctgcaag tcttcaggaa
     1261 catcaaacaa tccatactgg agagaaacca tacaagtgtg aaaattgtca caaagccttt
     1321 cgtcatcact catcccttag gaaacataag atagtccata ctggagagaa accttacaag
     1381 tgtgaagagt gtggcagatg tttttccaga tattcctacc ttagaagaca tcaagaaatt
     1441 cactctgaag gcaatccaca gacgtgtgtg gaatgtggca aaacctttct taatgtttat
     1501 cgtcttactc gacacataaa agttcatact agagagaaat cctactaagg tcttaaaaaa
     1561 gtgtatcctt attccaaata attcatactg aataaatctc tgtgactgta
//
