LOCUS       XP_038956068             518 aa            linear   ROD 11-JUN-2023
DEFINITION  zinc finger protein 449 [Rattus norvegicus].
ACCESSION   XP_038956068
VERSION     XP_038956068.1
DBLINK      BioProject: PRJNA677964
DBSOURCE    REFSEQ: accession XM_039100140.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Rattus norvegicus"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     Protein         1..518
                     /product="zinc finger protein 449"
                     /calculated_mol_wt=59842
     Region          27..134
                     /region_name="SCAN"
                     /note="leucine rich region; smart00431"
                     /db_xref="CDD:128708"
     Region          <323..483
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          325..345
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(330,332,334,336..337,340..341,344,358,360,364..365,
                     368..369,372,386,388,390,392..393,396..397,400)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          353..373
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          381..401
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          409..429
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(414,416,418,420..421,424..425,428,442,444,448..449,
                     452..453,456,470,472,474,476..477,480..481,484)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          437..457
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          465..485
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          477..502
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          493..513
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..518
                     /gene="Zfp449"
                     /coded_by="XM_039100140.1:423..1979"
                     /db_xref="GeneID:684901"
                     /db_xref="RGD:1584453"
ORIGIN      
        1 mavalgraiq aslnqgsvlq eydtdcevfr qrfrqfqyte aagpheafnk lwelccqwlk
       61 pkmrskeqil ellvleqflt ilpteietwv rehcpdnrer vvsliedlqr eleipepqid
      121 mddmlleela pvgtvpmppn lhleepslqv mapvqeppvp dawipqagpq dlnystdgec
      181 qsfldpgyql pkldmnfpld hreepwvkdl edpkemkqll dskigfemgi eneedaskqk
      241 klenlypfvv tlegnalhgp ilqkdyvqle newetspedl qtdltklvdp qnptlgetpe
      301 npdleeplnp kppkkkspgd kphrcpqcgk cfarksqltg hqrihsgeep hkcpecgkrf
      361 lrssdlyrhq rlhtgerpye ctvckkrftr rshllghqrt hseeetykcl ecgksfchgs
      421 slkrhlktht gekphrchnc gksfsrltal tlhqrthtee rpfkcsycgk sfrqrpslvi
      481 hlrihtgekp ykcthcsksf rqraglimhq vthfrgll
//
