LOCUS       XM_017589936            3085 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 446 (Zfp446),
            transcript variant X5, mRNA.
ACCESSION   XM_017589936
VERSION     XM_017589936.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_017589936.3.
            
            On Jan 21, 2021 this sequence version replaced XM_017589936.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3085
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3085
                     /gene="Zfp446"
                     /note="zinc finger protein 446; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 15
                     ESTs, 1 Protein, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 36 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:102552463"
                     /db_xref="RGD:7612453"
     CDS             223..1500
                     /gene="Zfp446"
                     /codon_start=1
                     /product="zinc finger protein 446 isoform X1"
                     /protein_id="XP_017445425.1"
                     /db_xref="GeneID:102552463"
                     /db_xref="RGD:7612453"
                     /translation="MPSPLGTPHLSFRDSRTTLEEPEAARLHFRGFCYEEVEGPREAL
                     ARLRELCHQWLQPESSSKEQMIELLVLEQFLGVLPPEIQAWVRGQRPGSPEEAAALVE
                     ELQHDPGQLLGWITAHILKPKILPSVQKMEESSGSHHISAAMESSKAGPAEAPQDAGI
                     DRSTQISCSVKEEVSADGQEMVSPSTLLPAQGPEGHLEHQETASVSFQPGRIQEWGLM
                     DSSQKELCWGVMPEKYNTVVSQASLPLLQPETHVDSELRPKQETPHEGSESLGSHPPE
                     VGAIADPRLVQATPSERQSPCKDPPGLSPTPLLEAPARPTPRKLYVCEQCGLSFDWKS
                     VFIIHLRTHTRGPGLERPSQVAWEPAMRRSPGLRAYTCVECGRSFSWKSQLVIHRKSH
                     AGQRRHFCGDCGCSFDWKFQLVIHRKIHQPEDP"
ORIGIN      
        1 cactcctagc tgtgcaggcg cagctttata atccccctcc tctgaccgcc gagagtgcct
       61 cccagccatc ggacccaccc tttttctgtg tcagagcctg agaccccaac tctgagtgtc
      121 tcctgaacag gccagatgtc tcaggagagc tgatttcaat ccagaacttc ttaagagctg
      181 gtaggaccct ctgtcacctc caaaaagacc ctcaaaacaa gaatgccatc tcctctgggt
      241 accccacacc tatccttcag agactccagg accacccttg aggagcctga ggctgcacga
      301 ctccatttcc ggggtttctg ctatgaggag gttgagggac cccgagaggc attggcccgg
      361 cttcgagagt tgtgtcacca gtggttgcag cctgagtcat cctccaaaga gcagatgata
      421 gagttgctgg ttttggaaca gttcctgggt gtgttgcctc ctgagatcca ggcctgggtt
      481 cgaggacagc gaccaggaag ccccgaggag gccgctgccc ttgttgagga gctgcagcat
      541 gatcctggac agctgctggg ctggatcaca gcccacatcc tgaagccaaa gatacttcct
      601 tcagtccaga agatggagga gtcctcaggg agccaccaca tctcagcagc aatggaatcc
      661 tccaaggcag gcccagcgga ggcaccgcag gacgcaggga tagacagatc tacccagatc
      721 agttgcagtg tgaaggagga agtcagtgct gatgggcagg agatggtatc tccaagcacc
      781 ctccttccag cccagggccc tgagggacat cttgaacatc aggaaacagc ctccgtatcg
      841 ttccagccag gaagaatcca ggagtggggc ctgatggact catcacaaaa agagctgtgc
      901 tggggtgtga tgccggagaa atacaacaca gtggtatccc aggcaagcct gccgctgcta
      961 cagccagaga cacatgttga ctctgagctg agaccaaaac aggagacccc acatgaagga
     1021 tcagagtccc tcgggagcca tcccccagaa gtgggagcca ttgcagatcc aaggctagtt
     1081 caagccactc caagtgaaag acagagccct tgcaaggacc ctccaggctt gtctcctaca
     1141 ccactgcttg aagccccagc taggcccaca cctcggaagc tgtatgtttg tgagcagtgt
     1201 ggcctcagct ttgattggaa gtcagttttc atcattcatc tccgcacaca cacgagaggg
     1261 ccaggcctgg aaagaccatc acaggtagcc tgggagccgg ccatgcggcg ctcccctggc
     1321 cttcgggcct atacctgtgt ggagtgtggg cgcagcttca gctggaagtc acagctggtc
     1381 atccaccgca agagccatgc aggccagcgg cgccacttct gcggggactg tgggtgtagt
     1441 tttgactgga agtttcagtt ggtcattcat aggaagatcc accagccaga ggacccatga
     1501 gtagctggag aggcatgtct caccctgggt gcctccagcc cctgatgcac cacttctggc
     1561 atcctcttta gccaagagga ggttctaagg caccccaagt aagtcaggga ttgcaagaag
     1621 attgccctgt ccaatgccag gttatccagt gtatggagag gaggctgttc ccttcctttg
     1681 gttcctgctt tgtggagcca ggcctgggtt ggagttacta acctatgact ggggtccagc
     1741 ttgtgcaaga ggtggacact ccctgcttca ggatgctccg aaatcactta ggtccctcct
     1801 aagtggctgg gcaagacatc tctgtgcaag atactggaaa ccacatctgc ctttcaatcc
     1861 tgctgcatgc gaccctcaga ctaacatgtt agatttctaa tgtaagtttt acttctataa
     1921 caagaatttc taagtaaaca tcctgacttt tggttccact gaccaaaaga gcagccgtgt
     1981 gtgctagtta gcaggccaca ggaaccacag ggcagccggg ccctgaagat ctaattagtc
     2041 acttctctcc tccagctacc cagtttcttg tccacacaca ttgctcccca cctccctggc
     2101 ctttgaattc ctgaacttgg atggacttgg atgaatagtt gacttttctt tgggagtgag
     2161 aagggacaag agtggcttct gagaagttag acaacacgta ggtgcctcag gccatgcatg
     2221 cctctgggtg aaggctacac cccacatagc cagttcacta ctaaaccgga ggacaaaggg
     2281 ccactcccta ctgcccaggg aacagtgacc ctctggacag tcactcagga tcttttcagt
     2341 gcacggtgtc ctattaacta tgcctgtaaa ctaggtagat caaaacagat ttacttacta
     2401 attgttccga catcaaagcg ctgaagcaag tcacacaaat caaaaacaga ctcaccctgg
     2461 aagctacctg agacccttgg ctgatgacct ctttttccat ctttagcagt cggtagttgt
     2521 ttaccttggt gaatcattca tatttgattt ctgtttgcag ggccttttga gtggcatggg
     2581 gcccgatatt ccagggtaag gtgatcacct taagctcaga cgataaagtg ggacctttct
     2641 tttgtttgag acagggtctc ctaatgcagt agctgctaac ctctaactgg tcctcctgtc
     2701 tcagctttct atatgttaaa actataggct tataccacca agcccaggtt gatattttta
     2761 aattctatgt atgtttaaga cagtctcact ttaatgccct caaactatct gtagtcctcc
     2821 aacctcagcc cctgagtgtt ggaattaaag ttgtgtcatt gggccaggct aagactttaa
     2881 attcttttaa ttttaaaatt tagaaataca gagcaggatt cagtgttgta ggcagatctc
     2941 tgttagtttg aggtcagact gctttatata gtgtgttcca ggatagcctg gggctatgta
     3001 gtgagatcct gtcttaaaaa taaataaaga aataagcaaa taaattctga agatgggcac
     3061 atcaaagtgt catctagaaa cctga
//
