LOCUS       NM_001079943            3029 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus zinc finger protein 426 (Zfp426), mRNA.
ACCESSION   NM_001079943
VERSION     NM_001079943.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3029)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 3029)
  AUTHORS   Gerhard,D.S., Wagner,L., Feingold,E.A., Shenmen,C.M., Grouse,L.H.,
            Schuler,G., Klein,S.L., Old,S., Rasooly,R., Good,P., Guyer,M.,
            Peck,A.M., Derge,J.G., Lipman,D., Collins,F.S., Jang,W., Sherry,S.,
            Feolo,M., Misquitta,L., Lee,E., Rotmistrovsky,K., Greenhut,S.F.,
            Schaefer,C.F., Buetow,K., Bonner,T.I., Haussler,D., Kent,J.,
            Kiekhaus,M., Furey,T., Brent,M., Prange,C., Schreiber,K.,
            Shapiro,N., Bhat,N.K., Hopkins,R.F., Hsie,F., Driscoll,T.,
            Soares,M.B., Casavant,T.L., Scheetz,T.E., Brown-stein,M.J.,
            Usdin,T.B., Toshiyuki,S., Carninci,P., Piao,Y., Dudekula,D.B.,
            Ko,M.S., Kawakami,K., Suzuki,Y., Sugano,S., Gruber,C.E.,
            Smith,M.R., Simmons,B., Moore,T., Waterman,R., Johnson,S.L.,
            Ruan,Y., Wei,C.L., Mathavan,S., Gunaratne,P.H., Wu,J., Garcia,A.M.,
            Hulyk,S.W., Fuh,E., Yuan,Y., Sneed,A., Kowis,C., Hodgson,A.,
            Muzny,D.M., McPherson,J., Gibbs,R.A., Fahey,J., Helton,E.,
            Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M.,
            Madari,A., Young,A.C., Wetherby,K.D., Granite,S.J., Kwong,P.N.,
            Brinkley,C.P., Pearson,R.L., Bouffard,G.G., Blakesly,R.W.,
            Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J.,
            Myers,R.M., Butterfield,Y.S., Griffith,M., Griffith,O.L.,
            Krzywinski,M.I., Liao,N., Morin,R., Palmquist,D., Petrescu,A.S.,
            Skalska,U., Smailus,D.E., Stott,J.M., Schnerch,A., Schein,J.E.,
            Jones,S.J., Holt,R.A., Baross,A., Marra,M.A., Clifton,S.,
            Makowski,K.A., Bosak,S. and Malek,J.
  CONSRTM   MGC Project Team
  TITLE     The status, quality, and expansion of the NIH full-length cDNA
            project: the Mammalian Gene Collection (MGC)
  JOURNAL   Genome Res 14 (10B), 2121-2127 (2004)
   PUBMED   15489334
  REMARK    Erratum:[Genome Res. 2006 Jun;16(6):804. Morrin, Ryan [corrected to
            Morin, Ryan]]
REFERENCE   3  (bases 1 to 3029)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC129125.1.
            
            On or before Jan 11, 2007 this sequence version replaced
            XM_345907.3, XM_001076088.1, XM_001076925.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC129125.1, CK598507.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMD00132261,
                                           SAMD00132262 [ECO:0006172]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..3029
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q13"
     gene            1..3029
                     /gene="Zfp426"
                     /gene_synonym="Znf426"
                     /note="zinc finger protein 426"
                     /db_xref="GeneID:690895"
                     /db_xref="RGD:1590942"
     exon            1..23
                     /gene="Zfp426"
                     /gene_synonym="Znf426"
                     /inference="alignment:Splign:2.1.0"
     exon            24..80
                     /gene="Zfp426"
                     /gene_synonym="Znf426"
                     /inference="alignment:Splign:2.1.0"
     exon            81..230
                     /gene="Zfp426"
                     /gene_synonym="Znf426"
                     /inference="alignment:Splign:2.1.0"
     CDS             203..1864
                     /gene="Zfp426"
                     /gene_synonym="Znf426"
                     /codon_start=1
                     /product="zinc finger protein 426"
                     /protein_id="NP_001073412.1"
                     /db_xref="GeneID:690895"
                     /db_xref="RGD:1590942"
                     /translation="MAAPDSLSHGPSGDSVCLQEEKVSAEMMLVDCLTNYQELVSFDD
                     VIVDFTQEEWTSLNPDQRTLYREVMLENYKNLATVGYQLIKPSVISWLEQEEFSTGQK
                     IVFPEWKIQLETQCSASQQELLRGNISNGMQTQTGSDTGRGLCDGTQYGDFFSELSPL
                     RTVMKTRPAQDNYDSSQCRKDFLMLQRKKCAGEKLSEFNQSEETGAIPGKAYQKMATQ
                     EKCFECSDCGKSFMNQSHLQTHQRTHSGDKLYELNECGRSFINSRLAVLIETLNAKKP
                     HRCKECGKGYRYPAYLNIHMRTHTGEKPYECKECGKAFNYSNSFQIHGRTHTGEKPYV
                     CNQCGKAFTQHSGLSIHVRSHNGDKPYACKECGKAFLTSSRLIQHIRTHTGEKPFVCV
                     KCGKAFAISSNLNGHLKMHAEEKTCECKICGKAFGYLSCLNNHMRTHNAKKSYTCKEC
                     GKAFNYSTHLKIHMRIHTGEKPYECKQCGKAFSHSTSFQIHERTHTGEKPYECKECGK
                     AFICPSSFRIHEISHTHTEEKPYKCQQCGKAYSHPRSLRRHERIH"
     exon            231..313
                     /gene="Zfp426"
                     /gene_synonym="Znf426"
                     /inference="alignment:Splign:2.1.0"
     exon            314..440
                     /gene="Zfp426"
                     /gene_synonym="Znf426"
                     /inference="alignment:Splign:2.1.0"
     exon            441..521
                     /gene="Zfp426"
                     /gene_synonym="Znf426"
                     /inference="alignment:Splign:2.1.0"
     exon            522..604
                     /gene="Zfp426"
                     /gene_synonym="Znf426"
                     /inference="alignment:Splign:2.1.0"
     exon            605..2919
                     /gene="Zfp426"
                     /gene_synonym="Znf426"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gagttgggag ttatctggcc tttaaagaaa tgaatttttg ccggagtagt tggagtgacc
       61 ttgcgatttc agcacctctg gaatgctaac agttgtgtac accggtgata gagcgccact
      121 gttcgctaaa actcatcagc tgcactaaag cgaggcttgc ctcagtgaaa ggagtcctca
      181 tgcacacttc ccgtgttaca ggatggcagc tcctgattca ttgtcccacg gtccttcagg
      241 ggactcagtc tgccttcagg aagaaaaagt atcagccgaa atgatgttgg ttgattgcct
      301 gacaaattat caggagttag tgagctttga tgatgtgatt gtggacttta cccaagagga
      361 gtggacctca ctgaacccag atcagagaac cctctaccga gaggtgatgc tggagaacta
      421 caagaacctg gccacagtag gatatcagct catcaaaccc agtgtgatct cttggttgga
      481 acaagaagag tttagtacag ggcagaagat agtttttcca gaatggaaaa tacagctcga
      541 gacccagtgt tcagcatccc agcaggagct tttgaggggt aacatatcca acgggatgca
      601 aacgcagaca ggaagtgaca caggaagggg cctctgtgac gggacacaat atggagactt
      661 cttcagtgaa ctctcgcccc ttaggacggt tatgaaaact cgacctgcac aggataatta
      721 tgatagtagt caatgcagga aagactttct aatgcttcag aggaaaaagt gtgctggtga
      781 gaaactttct gagttcaatc agagtgaaga aaccggtgcg atcccaggta aagcttatca
      841 gaaaatggcc acacaagaga aatgttttga atgcagtgac tgtgggaagt cctttatgaa
      901 tcagtcacat cttcagacac atcagagaac tcacagtgga gacaaacttt atgaattgaa
      961 tgagtgtggg agaagtttta taaactcaag acttgctgtg cttatagaaa ctctcaatgc
     1021 aaagaaacct cacagatgta aggagtgtgg gaaaggctac cgataccctg cgtatctaaa
     1081 cattcacatg cgaacccaca ctggggagaa accctatgag tgtaaggagt gcgggaaggc
     1141 cttcaattat tccaattcat ttcagatcca tgggagaact cacacagggg agaagcccta
     1201 tgtctgtaat cagtgtggga aagccttcac tcagcactca ggtctgagta tacatgtgag
     1261 atcgcacaat ggagacaagc cctacgcatg caaggagtgt gggaaagcct tcctcacatc
     1321 ctctcgcctt atccagcata tacgaactca cacgggagaa aaaccttttg tatgtgtcaa
     1381 atgtgggaaa gcctttgcta tttcttcaaa ccttaatggg catctgaaaa tgcacgccga
     1441 agagaagacc tgtgagtgca agatctgtgg gaaagcattt ggatatcttt catgtcttaa
     1501 taatcacatg agaactcata atgccaaaaa atcctacaca tgcaaggagt gtggaaaggc
     1561 ctttaactat tccacccacc ttaaaattca catgcgaatc cacactggag aaaaacccta
     1621 tgagtgtaaa cagtgtggaa aagccttcag tcattccact tcatttcaga tccatgaaag
     1681 aacccacact ggagagaagc cctatgaatg caaggagtgt ggcaaagcct tcatctgccc
     1741 cagttccttc aggattcatg aaataagtca cacccacacg gaagagaaac cctataagtg
     1801 tcagcagtgt ggaaaagcct acagtcaccc tcgttcactt cgcagacatg aaagaattca
     1861 ctagagagaa acctagttga tggaagcaag acaagaaagt cctcagttgc ggccatttgc
     1921 tttgcagaca tgatggtact cacactgggg agaaactgtt gaagttagat catagcttag
     1981 agcagtgctg tatggctgta ctgagcaaca aatactccat gtcaaaaaat taaagcggct
     2041 cagtgggtaa aagcacttga atgtgtggca acttgaattt gacccacatc catgtaaaac
     2101 agacagatgt agtggcatgc gtctgtattc tcagcatttc tacaagagag gaggcagagg
     2161 cagcagattc acctggaagc ttgcgggcca gctagtctag tctgtgcagc atggcagaga
     2221 ggaagactct gcctcaacaa ggtagaagac ctaatgcctc aacgttgccc tctggtttcc
     2281 atgtgtgtgc ccactctccc acagatacca cagtaataga aaaatgttta aagaattgaa
     2341 aggagggctg ttgagatgac tcagcagaca gaagcattct ccattcaatc ctcactatcc
     2401 gttttccatc cctggatccc acagcgtaag gagagaattg gctcctaaaa gctgccctct
     2461 gacctccaca tgaatgctgt ggcatgcacc cccctaataa tattacattt taaaaattca
     2521 aatgagggac tgtagggatg actcagttac gagcatctgc tgctcttgca gaagaccagg
     2581 cttcagtttc cagcactcac atggcggctt tcagccatcc ataactaggt gacgggaatt
     2641 tgacctcttc tgacctcagt gatcactcag catacacatg tgcaggcaaa atatgtataa
     2701 agcaaaaata ataaaatgaa gttgcaatga atccattaaa actggctaat gtccccaaga
     2761 ggttaagatg aagcaggagg aacacagaga tgaccacgga ccatcagaca tccttctgca
     2821 attacagacg ctagccacca caagtgtctg tactaaggcc ccagaggaag ctccctgagg
     2881 cctccagatt ctaagaaata aatagccatg tttgcactaa aaaaaaaaaa aaaaaaaaaa
     2941 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
     3001 aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
//
