LOCUS       NM_001108042            3322 bp    mRNA    linear   ROD 26-OCT-2024
DEFINITION  Rattus norvegicus zinc finger protein 410 (Zfp410), transcript
            variant 1, mRNA.
ACCESSION   NM_001108042 XM_001058294 XM_234409
VERSION     NM_001108042.3
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3322)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000006.1.
            
            On Nov 27, 2020 this sequence version replaced NM_001108042.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC168180.1, SRR26643299.28243.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-47                JAXUCZ010000006.1  109695443-109695489
            48-227              JAXUCZ010000006.1  109699662-109699841
            228-363             JAXUCZ010000006.1  109700696-109700831
            364-582             JAXUCZ010000006.1  109702833-109703051
            583-774             JAXUCZ010000006.1  109704608-109704799
            775-925             JAXUCZ010000006.1  109708196-109708346
            926-1107            JAXUCZ010000006.1  109709918-109710099
            1108-1197           JAXUCZ010000006.1  109711241-109711330
            1198-1323           JAXUCZ010000006.1  109715425-109715550
            1324-1464           JAXUCZ010000006.1  109716331-109716471
            1465-1592           JAXUCZ010000006.1  109717841-109717968
            1593-3322           JAXUCZ010000006.1  109719640-109721369
FEATURES             Location/Qualifiers
     source          1..3322
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q31"
     gene            1..3322
                     /gene="Zfp410"
                     /gene_synonym="Znf410"
                     /note="zinc finger protein 410"
                     /db_xref="GeneID:314310"
                     /db_xref="RGD:1305636"
     exon            1..47
                     /gene="Zfp410"
                     /gene_synonym="Znf410"
                     /inference="alignment:Splign:2.1.0"
     exon            48..227
                     /gene="Zfp410"
                     /gene_synonym="Znf410"
                     /inference="alignment:Splign:2.1.0"
     CDS             195..1631
                     /gene="Zfp410"
                     /gene_synonym="Znf410"
                     /codon_start=1
                     /product="zinc finger protein 410"
                     /protein_id="NP_001101512.1"
                     /db_xref="GeneID:314310"
                     /db_xref="RGD:1305636"
                     /translation="MLSDELESKPELLVQFVQNTSIPLGQGLVESEAKDITCLSLLPV
                     TEASECSRLMLPDETANHANSSKEVPSSAVLRSLQVNVGPDGEETRAQTVQKSPEFLS
                     TPESPSLLQDLQPSDSTSFILLNLTRAGLGSSAEHFVFVQDEAEDSGADFLSAESTDS
                     NIPWFLRVQELAHDSLIAATRAQLAKNAKTGSNGENVHLGSGDGQLKDSGPLPQVEKK
                     LKCTVEGCDRTFVWPAHFKYHLKTHRNERSFICPAEGCGKSFYVLQRLKVHMRTHNGE
                     KPFMCHESGCGKQFTTAGNLKNHRRIHTGEKPFLCEAQGCGRSFAEYSSLRKHLVVHS
                     GEKPHQCQVCGKTFSQSGSRNVHMRKHHLQLGTTGSQEQDQTAEPLMGSSLLEEASVP
                     NKTLVSMNPQSSLGGETLNLPNTNSILGVDDEVLTERSSRPLSSVPDVTHHLVTMQSG
                     RQSYEVSVLTAVNPQELLNQGDLTDRQT"
     exon            228..363
                     /gene="Zfp410"
                     /gene_synonym="Znf410"
                     /inference="alignment:Splign:2.1.0"
     exon            364..582
                     /gene="Zfp410"
                     /gene_synonym="Znf410"
                     /inference="alignment:Splign:2.1.0"
     exon            583..774
                     /gene="Zfp410"
                     /gene_synonym="Znf410"
                     /inference="alignment:Splign:2.1.0"
     exon            775..925
                     /gene="Zfp410"
                     /gene_synonym="Znf410"
                     /inference="alignment:Splign:2.1.0"
     exon            926..1107
                     /gene="Zfp410"
                     /gene_synonym="Znf410"
                     /inference="alignment:Splign:2.1.0"
     exon            1108..1197
                     /gene="Zfp410"
                     /gene_synonym="Znf410"
                     /inference="alignment:Splign:2.1.0"
     exon            1198..1323
                     /gene="Zfp410"
                     /gene_synonym="Znf410"
                     /inference="alignment:Splign:2.1.0"
     exon            1324..1464
                     /gene="Zfp410"
                     /gene_synonym="Znf410"
                     /inference="alignment:Splign:2.1.0"
     exon            1465..1592
                     /gene="Zfp410"
                     /gene_synonym="Znf410"
                     /inference="alignment:Splign:2.1.0"
     exon            1593..3322
                     /gene="Zfp410"
                     /gene_synonym="Znf410"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 attcgggact gactgacgga cggcggccag ctgccctaga ctggaaggtt aaattgatta
       61 ccaacctagt tcagcgtctt acaggaagtg ttctgttttt taaagggatg tgaatgtaac
      121 aggaaggtgt cattggctga attagatgtg accctgtccc cccgaacagc tacaggattt
      181 cagaagctga atcaatgtta tcagatgagt tagaatccaa accagagctc ctggttcagt
      241 ttgttcagaa tacctccatc cccctgggac aagggctagt agaatcagaa gctaaagaca
      301 ttacttgctt atccctcctt ccagtgaccg aggcctcaga atgcagtcga ctaatgttac
      361 cagatgaaac tgcaaatcat gctaattcct ccaaggaggt cccttcttca gctgttttga
      421 ggagccttca ggtgaatgtg ggcccagacg gagaagagac aagggctcag actgtacaga
      481 agtccccaga gttcctgtcc acaccagagt cgcctagttt gttgcaagat ctacagccaa
      541 gtgatagcac ttcgttcatc cttctgaacc taacaagagc aggtctgggc tcttcagctg
      601 agcactttgt gtttgtacag gatgaggccg aggactcggg ggctgacttc ctctctgctg
      661 agagcacaga cagtaatatc ccatggttcc tccgggttca ggaactggcc cacgacagtt
      721 tgatcgcagc tactcgtgca cagctagcaa agaatgcaaa aactggcagc aatggagaaa
      781 atgtccacct tggttctggc gatgggcaac tcaaagactc tgggcccctt cctcaagtgg
      841 aaaagaagct caagtgcacg gttgaaggct gtgatcggac atttgtgtgg ccagctcact
      901 tcaagtacca ccttaaaact catcgaaatg agcgctcctt catctgccct gcagagggtt
      961 gtgggaagag cttctatgtg ctgcagcggc tgaaggtgca catgaggaca cacaacgggg
     1021 agaaaccctt tatgtgccat gagtctgggt gtggtaagca gttcactacg gctggaaacc
     1081 tgaagaacca ccgacgcatc cacacaggag agaagccttt cctttgtgaa gcccagggat
     1141 gtggccgctc ctttgctgag tattcaagcc ttcgaaaaca tctggtggtt cactcaggag
     1201 agaaacctca tcagtgccaa gtctgtggga agaccttctc tcagagtgga agtagaaacg
     1261 tgcacatgag aaagcaccac ttgcagctgg ggacaactgg gagtcaagaa caggatcaga
     1321 ctgctgagcc actaatgggc agtagtttgc ttgaagaagc ttcagttccc aataaaaccc
     1381 tggtgtctat gaatccccag tccagccttg gtggagagac cttgaatcta ccaaatacca
     1441 attctatcct tggagttgat gatgaggtgc ttactgaaag atcctcacgg cccctgtctt
     1501 cagtgcctga tgtgacacat cacttggtga ccatgcagtc aggaaggcag tcctatgaag
     1561 tttctgtctt aactgcagta aatccgcagg agttactaaa ccaaggagat ttaactgaca
     1621 gacagacatg agtttgctga ctcctggagg agctgttctg tctgatccca gagtgcatga
     1681 tgggaacaga tccaaaaggc tcaattatct gccagaacca aaatgagtct gcaggaccaa
     1741 gacctcgcct tgcctctgtt catctttcct ggcagagaag agggatgtct gagggcttct
     1801 cttcaccctc cagcggatgc agtccaagag tgaagccatg actgtgggct ggacacctgt
     1861 agctgcctct cagtgcaacg tttgagggta gacttcccaa gagcgagttt aattatgtgt
     1921 tggctgaaga ttttcattgt gactgtcgag gttttccttt gaagagtttt catcctagac
     1981 ccagctatct tttcatatgg ttgaattatg tcctgcttcc aaccacagaa ctttaccaga
     2041 acactgagtt ttcaagatgc cttgttgctt tgaagaaggg agggatgcca gttacattgt
     2101 ggcaatgtgt tctcccttta gcaacctgag taaaagactc agccgttggg ctgtaaaaat
     2161 taaattactt gaatctcccc ttggcccagg ctgaggtacc aacatacccc gtacactttg
     2221 acttggtcat tttttgtttt gtttatggga cttaaactag catgttatca gggggttttg
     2281 gttttgtttt tttggttttt ttttgttgtt gttgtttttg tttttttttt tttaagttaa
     2341 aaaccacatg atttagaggg gctttttttc cttttaaata aacaaaacaa cccagtcacc
     2401 tgtttggctc ttgttttaga tcagtggtcc tcatccttcc taacgctgct accctttaat
     2461 acagttcttt atgttgtggt gaccccaact ataaaatgat tttcattgcc actttttttt
     2521 tcttttcttt ttttcggagc tggggacgga acccagggcc tgagctaaat ccccaacccc
     2581 tcattgccac ttcctaactg tgattttgct attgttatga atcgtaatgt gggtaccttt
     2641 tatatatata gcatatatct gatcctggat tgagaacgtt gttttagatg tggggtattg
     2701 ttgttgttgt tggatacatt ttgtgttttt tttttttcaa gacaaggttt ctttgtgtag
     2761 ctttggaggt cctagaacgc attctgtaga ccaggctgac cttaaactct gcctcctaag
     2821 tgctgtgact aaaggtatac accactcctg cctgtagcag atgtgttctt agaggtcgag
     2881 agaattatcc agtcattctc tttttaagag agagtatcag atagagaaag gggactaagg
     2941 ataggatagt agttcatgcc cctggtccca ggactcagag acagaggcag gcagatctct
     3001 tatgaatttg agaccagttt tgacacataa caagttctag ggcagccagg gatatagggt
     3061 tacacagtga gacactgtct taaaaaaaat aagaaggggg ttggggattt agctcagtgg
     3121 tagagcgctt gcctaggaag cacaaggccc tgggtttggt ccccagctcc ggaaaaaaaa
     3181 aaaaataaga aggaccctga tgagccatga cccccaacat gcaaggaaca aacaaatttc
     3241 ttgagtttga ggacagcctg atgtatatag gaagtgttag atcaacaagg tatccaaaca
     3301 acaacaaaaa aaagaaaaga aa
//
