LOCUS       XM_017601148            8106 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 407 (Zfp407),
            transcript variant X2, mRNA.
ACCESSION   XM_017601148
VERSION     XM_017601148.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051353.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_017601148.3.
            
            On Jan 21, 2021 this sequence version replaced XM_017601148.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8106
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="18"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..8106
                     /gene="Zfp407"
                     /note="zinc finger protein 407; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     ESTs, 2 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 5 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:307213"
                     /db_xref="RGD:1310645"
     CDS             312..7079
                     /gene="Zfp407"
                     /codon_start=1
                     /product="zinc finger protein 407 isoform X1"
                     /protein_id="XP_017456637.1"
                     /db_xref="GeneID:307213"
                     /db_xref="RGD:1310645"
                     /translation="MDSESRHENDEDGSVKGADPRSVPSCDGSRGPVSDDRANASENF
                     TSKRIFSESSNSDSIAMEEDRIERASKRLRTEAVESETREQGACGLGTAEVNVHLAEM
                     EKEVFPANHSEEGRALPNVSPSSCDFSTSDTLPLKVDDVKKPAQEMVALDPERHTPFP
                     PEEVSVSCSFGSVETGLRCGVCGCSFSSCSALEKHVECHVGQGKDRSCCHCSHRAESS
                     SSPHVHAKHSQGPQKVFSCDLCGFHCAEENLLDAHYLGKTHLRRQNLAARGGFVQILT
                     KQSFPKKACVVGTKNVRTKPRASKPIARNGDSKGARNSGKKSKDCRAAPSEGSAGSSE
                     LLVEMVPSRRISSGKAGVVEENVSFGVAQNPENQNKQLGGLVSSDGLLSKSEPTKNVL
                     QTAHVSISTTSRPRSERNLLMLGNSFRRRSGAFTLKGQAKKRFNLLGINKRGTNETQR
                     LYVKHLRTQMKANAQPVLEQMQMGKDVQSLCVTTSDNPEVMQDKTASGLSGFTRLGSL
                     EVKPADHQLSVQCPCTECGQITANKTDLDIHVQKCHVREVQFHCQTCDFSSPSRRDLE
                     EHLHSNQHQQTTPVLSCQCCPFISLSETSLRVHMKEKHGMGFFCTSCNLFLSERDVEE
                     HRATEAHNSLVVQPKTASSLSRDSVLPLSTLESDNMADSREDSGKASQEEPAESRASH
                     GTEARHSSKPQFQCKKCFYKTRSSTVLTRHIKLRHGQDYHFLCKACNLYSLSKEGMEK
                     HIKRSKHLENAKKNNIGLSFEECIERVCIGANDKKEESNVSGSGRPEGHIGVRLQEHS
                     HCEQSMLTPKELPQSGVITKEDELGLASTPKRGRPKGSISRTCSHCGLLASSITNLTV
                     HIRRKHSHQYSYLCKVCKYYTVTKGDMERHCATKKHKGRVEIEANGKHSSDIIVGPEG
                     GNLEACKKSTLALTVSDEQANKSAKSDASTLDKPVVGNGDTGDADAGSALQSVDGEVS
                     SQLADKKGQIALETEDLQQHDDACSQRDVAGSSDNKCLHCEFSAHSAASLELHVKRKH
                     TKEFEFYCMACDYYAVTRREMTRHAATEKHKMKRQSYLSSSNVEAGSSEISKSITIPE
                     EEHSQNSEEFQISPHQSSGTLQSRHPADCSILYDNTNLDMSKVLCAPDSVAVVAEQES
                     NFNEDHSFCETLHQPLAKDRSIKPREIVSLNTPSNRSSPGCLQSGNLASSAVDSETAK
                     RNHNLLDDVGDTSAHCEDEGGSLDGSEEKVLDKSPCPGDLDGGHSAESISPVVVKIPR
                     EQLDLDGGGQSKVGCEQTSEDLKDVQANSNLESKEILMNSQHEPEVILEEDAPASIGT
                     AENNDAYETIISIDDKGQTMYSFGRFDSSIIRIKTEDGELVEQPEEGLMVTGGKVSEL
                     PLKDCAQGLKKKKVEGSSFGESTRIRCDDCGFLADGLSGLNVHIAMKHPTKEKHFHCL
                     LCGKSFYTESNLHQHLASAGHMRNEQASVEELPEGGATFKCVKCTEPFDSEQNLFLHI
                     KGQHEELLREVNKYIVEDTEQINREREENQGNVCKYCGKMCRSSNSMAFLAHIRTHTG
                     SKPFKCKICHFATAQLGDARNHVKRHLGMREYKCHVCGVAFVMKKHLNTHLLGKHGVG
                     TPKERKFTCHLCDRSFTEKWALNNHVKLHTGEKPFKCTWPTCHYSFLTASAMKDHYRT
                     HTGEKSFLCDLCGFAGGTRHALTKHRRQHTGEKPFKCDECNFASTTQSHLTRHKRVHT
                     GEKPYRCPWCDYRSNCAENIRKHILHTGKHEGVKMYNCPKCDYGTNVPVEFRNHLKEQ
                     HPDIENPDLAYLHAGKQAELPSDVQGIVSKSYECRLKGQGATFVETDSPFTAATLAEE
                     SPVKEKSLRSSKRQASSPEQVQQVIIIQGYDGEFALDASVEETAAATLQTLAMAGQVA
                     RVVHITEHGQVIATSQNGSHVGSVVPGPILPEQLADGATQVVVMGGSMETHSVDEALS
                     PGAAVIQQVTKQELLSLSEAAVPPSDNSSALDALLCAVTELGEVEGRAGHEDKGRPGH
                     KDVLIQLPSQEEAHDHAKMEATETQLFQDGQESPAAMEVLTQVVRPSAIITSQERAQV
                     AFKKMVQGVLQFAVCDTAAASQLIKDGVTQVIVNEEGAVHMVAGEGSQFIMQEAETHG
                     LRVPAEHMDLVESEGEISQIIVTEELVQAMVRESSSNFPEGATHYIVTELPPGVQEDT
                     GVYSHTVIETASSPEILQAGAALSAEAVGASSTEQLTSMVIYTQDGSPAATVIQSQRE
                     NSELQEA"
ORIGIN      
        1 tataaaataa gtggaaaatg atatgtgtta atttaattag ctatcctaat gaaaaataaa
       61 atcaataata ttgattttaa ggcattttat tcaggataat tcccttcttc tccaaaactt
      121 actccattaa ttttgtacca tcgacatttc cctttgccat taatcttcag acaacacaaa
      181 aatgactgtg agataagaaa gttgattgcc acctggaaga ggaaggcttt ccattgacaa
      241 aagccttagg gttgtgagcc ccagttaaat tcgactctga cagaagaagc gtcatcagag
      301 gctgactgag aatggattcg gagagcagac atgaaaacga tgaggacgga agtgttaagg
      361 gagcagatcc aaggagtgtt ccgtcctgtg atggcagccg tgggcctgtg tctgacgaca
      421 gagcaaatgc ctctgagaat tttacgagca aaagaatttt ttcagaatca tccaactcgg
      481 acagcattgc tatggaggaa gacagaattg aacgtgcttc caaacgactg agaacagagg
      541 cagtggagtc cgagacaaga gagcagggtg cctgtgggtt gggcactgca gaagttaatg
      601 tccatttggc tgaaatggaa aaggaggtct ttccagcaaa ccactcagaa gaaggcagag
      661 cgcttcccaa tgtttccccc tcgtcctgtg attttagcac gtccgatact cttcctctga
      721 aagtagatga cgtgaagaag cctgctcagg aaatggttgc ccttgatcct gaaagacaca
      781 ccccttttcc tccagaagaa gtgagcgtta gctgtagctt tggaagtgta gagacaggac
      841 tcaggtgtgg tgtgtgtggc tgttcatttt cctcttgctc tgctttggaa aagcatgtgg
      901 aatgtcatgt gggacagggg aaggaccgtt cctgctgcca ttgtagccac agagcagaga
      961 gcagctcgtc tcctcatgtg catgccaaac atagtcaagg accacagaaa gtcttttcct
     1021 gtgacctctg tggctttcac tgtgctgaag aaaacctgtt ggatgcacat tatcttggca
     1081 aaacacacct tcgtcgtcag aaccttgctg ctcgtggagg attcgtgcag atcttaacaa
     1141 aacagtcttt tcccaaaaaa gcctgtgtcg tgggaacaaa aaatgttaga acaaaaccaa
     1201 gagcttctaa accaatagca aggaatggag attcaaaagg agcaaggaat tctgggaaga
     1261 agtctaaaga ctgcagagca gccccttctg aaggcagcgc tggtagtagt gagctcctag
     1321 ttgaaatggt gccatccagg agaatctcat cagggaaagc aggtgtagtt gaggaaaatg
     1381 ttagttttgg tgtagctcag aatcctgaaa atcagaacaa acagctaggg ggcttagtaa
     1441 gctcagacgg tcttttaagt aaatcagaac ccactaaaaa tgtcctccag acagctcatg
     1501 tcagtatcag taccacctca aggccgagat ctgagcgaaa ccttctaatg ttgggtaata
     1561 gctttcgcag gcgaagtggc gcttttactt taaagggcca ggccaagaaa aggtttaatc
     1621 ttctaggaat taataaaagg ggaacaaatg aaactcagag gctatatgtg aaacacttga
     1681 gaacacaaat gaaagcaaat gcccagcccg tgctggagca gatgcagatg ggcaaagatg
     1741 ttcagagtct gtgtgtgact acctcagaca acccagaagt gatgcaggac aaaacagcct
     1801 ccggactgtc aggcttcaca cgcctgggct ccctcgaagt caagccagct gaccaccagc
     1861 tctctgtgca gtgtccctgt acagagtgtg gccagataac tgcaaataag acagacttgg
     1921 atattcatgt tcaaaagtgc catgtaagag aggtgcagtt tcattgtcag acttgtgact
     1981 tttctagtcc atcaaggaga gacttggagg aacacttgca cagcaatcag catcagcaaa
     2041 cgacacctgt cctcagctgt cagtgttgtc cctttatttc cttgagtgaa acgagtctta
     2101 gagttcatat gaaggaaaag cacggcatgg gctttttctg cacctcttgt aatctgttct
     2161 tgtccgagag agatgtagaa gaacacagag caactgaggc acataatagc ttagtggttc
     2221 agccaaaaac cgcttcatca ttgagtaggg attctgtttt acctttaagt actttagaat
     2281 ccgacaacat ggctgattct agagaagact cagggaaagc atctcaggaa gaacctgctg
     2341 agtccagggc aagccatgga actgaggcaa ggcattcaag taaacctcag tttcagtgta
     2401 agaagtgttt ttataaaaca aggtcttcca ccgtccttac gagacacata aagcttcggc
     2461 atggtcagga ctatcacttt ctttgtaaag catgtaatct ttattcattg agcaaagaag
     2521 ggatggagaa gcacattaaa agaagcaaac atcttgaaaa tgctaagaaa aacaatattg
     2581 gtctaagttt tgaagagtgt attgaaagag tatgtatagg tgcaaatgat aaaaaggaag
     2641 agtccaatgt ttctggaagt ggaaggcccg aaggccatat tggtgtgcga ttacaggagc
     2701 attcccattg tgaacagagt atgctaacac ctaaggaact gccacagtct ggtgtcatca
     2761 ccaaagagga tgaattaggc ttagccagta ctccaaagag agggagaccc aaaggcagca
     2821 tttctcggac ttgttcacat tgtggacttt tggcctctag tattacaaat ttgactgtgc
     2881 atatcaggcg taaacacagt caccagtata gttatttgtg caaagtatgt aagtattaca
     2941 ctgtcactaa aggagacatg gaacgtcatt gtgccaccaa gaaacataaa ggacgggtgg
     3001 aaatagaagc aaatgggaaa cacagttcag atataattgt tggcccagaa ggaggtaatc
     3061 ttgaagcgtg taagaagagc actctagcac tgactgtttc tgatgagcag gctaacaagt
     3121 cagctaagtc agacgcatct accttagaca agccagtagt cggtaatgga gacacaggcg
     3181 atgctgacgc tgggagcgca ttgcagtctg tagatggaga agttagcagt cagctcgctg
     3241 ataaaaaggg acagatagct ctagagacag aggaccttca acagcacgat gatgcatgct
     3301 ctcagagaga tgttgcaggc tcaagtgaca ataaatgtct acactgtgag ttcagtgctc
     3361 actctgctgc ttcgctagag ttgcatgtga aaaggaagca taccaaagaa tttgagtttt
     3421 attgcatggc ctgtgattac tatgcggtga ctcgcagaga aatgactaga catgctgcca
     3481 cagagaagca taaaatgaaa aggcagtctt acctcagctc ttctaatgtg gaagcaggtt
     3541 cttcagaaat atccaagagc atcactatac ccgaggagga gcattcacag aattcggagg
     3601 aatttcaaat aagtccacac caatcatctg gtactctcca atctagacat cctgcagatt
     3661 gttctatttt atatgataat actaatttag acatgtctaa agtactctgt gctcctgatt
     3721 cagtggcagt tgtggctgag caagaatcta attttaatga agatcattcc ttttgtgaga
     3781 ccttgcacca gcccctcgct aaggacagaa gtataaaacc cagggagata gtgtccctta
     3841 acactccctc taaccgcagc tccccaggct gtcttcaaag tggaaaccta gctagctctg
     3901 ctgtggactc tgagactgca aagagaaacc acaacctgtt ggatgatgtt ggtgacacaa
     3961 gcgcacactg tgaagatgag ggaggcagct tggatggtag tgaagaaaaa gttcttgaca
     4021 agtccccctg ccctggagat ctagatgggg gccattcagc tgaatccatt tcccctgtgg
     4081 tggtgaaaat accaagagaa cagctggacc tggatggtgg tggccagagc aaagttgggt
     4141 gcgaacagac ttcagaagat ttaaaagatg tgcaagcaaa ctctaatctt gagagtaagg
     4201 aaattctgat gaactcacaa catgaacctg aagtcatttt ggaagaggat gccccagcct
     4261 ctattggcac agctgaaaat aatgatgctt atgaaactat cataagtatt gacgacaaag
     4321 ggcaaactat gtacagtttt ggcaggtttg attcttccat aattagaata aaaactgaag
     4381 atggtgaatt ggtagaacag ccagaggagg gtctgatggt gacagggggt aaagttagtg
     4441 agttgcccct gaaagactgt gctcagggat tgaagaagaa gaaagttgaa ggcagttctt
     4501 ttggtgagtc cacacgaatc cgatgtgatg attgtggctt cttagcagat ggactgagtg
     4561 gcctgaatgt tcatatagcc atgaagcatc ccacaaagga gaagcacttt cattgtttat
     4621 tatgtggaaa atcattctac acggagagca accttcacca gcatttggct agtgctggtc
     4681 atatgagaaa tgaacaggcc agtgtagaag agcttccaga gggtggggcc accttcaaat
     4741 gtgtcaagtg tacagagccc tttgattccg aacagaactt atttctgcat attaaagggc
     4801 agcatgagga attgctacgg gaggtaaata agtacatagt ggaagacacg gagcagatca
     4861 atcgggagag agaggaaaac caggggaatg tctgcaagta ttgtgggaag atgtgtcgga
     4921 gtagcaattc catggccttt ctggcccaca ttcggactca tacaggatca aaaccattca
     4981 agtgcaagat atgccatttt gcaacagctc agcttggaga tgccagaaac catgtgaaaa
     5041 ggcaccttgg gatgagggag tacaagtgtc acgtctgtgg ggttgctttt gtgatgaaga
     5101 aacacttgaa tactcatctg ctaggcaagc atggagttgg caccccaaaa gaaaggaaat
     5161 ttacatgcca cttatgtgat agaagtttca cggagaaatg ggccttgaac aaccatgtga
     5221 agctgcacac aggagaaaag ccgtttaaat gcacatggcc cacgtgtcac tactcgttcc
     5281 tcacggcctc agcgatgaaa gaccactaca ggacacacac aggcgagaag tcgtttctct
     5341 gtgacctctg tggcttcgct ggtgggaccc ggcatgccct caccaagcac cgtcggcagc
     5401 atacagggga aaagcctttc aaatgtgatg agtgtaactt cgcctccaca acccagtcac
     5461 acttgactcg gcataagcgt gtgcacactg gagagaagcc atacaggtgc ccttggtgtg
     5521 actacaggtc aaactgtgct gagaatatcc gcaaacacat tttacacacc ggcaaacatg
     5581 aaggcgtcaa gatgtacaac tgcccaaagt gtgactatgg gacgaatgtc cccgtggaat
     5641 tccggaacca cttgaaggag cagcatcctg acattgagaa ccctgacctc gcatacttgc
     5701 atgctggtaa acaggcagag ctgccatccg atgtgcaggg catcgtgtcc aagtcctatg
     5761 agtgccgcct gaaaggacaa ggagccacct ttgtggaaac agacagcccc ttcactgcag
     5821 ccaccctggc agaggagtca cctgtcaagg agaagtccct gaggagcagc aagagacagg
     5881 cttcctcccc cgagcaggtc cagcaggtca tcatcatcca gggctatgat ggggagtttg
     5941 ccctggatgc ctctgtggaa gagactgctg cggccacact gcagacactg gcaatggctg
     6001 gccaagtggc cagggtggta cacatcacag aacatgggca ggtcattgcc acaagtcaaa
     6061 acgggtccca tgttggcagt gtggtacctg gacccatcct ccccgagcag ttggcagatg
     6121 gagccaccca ggtggttgtc atggggggtt ccatggaaac tcacagtgtg gatgaggccc
     6181 tcagtccagg tgccgctgtc atacagcagg tcaccaagca ggagctctta agtctctctg
     6241 aggctgcagt ccctccgtct gacaactcct cagccttaga tgcactgctg tgtgccgtca
     6301 ctgagttggg agaggtggag ggcagagcgg ggcatgagga caaaggtagg ccaggccaca
     6361 aggatgtgct gatccagctg cccagccaag aagaagccca cgatcatgcc aagatggagg
     6421 ccacagagac tcagctgttc caagatggtc aggagagtcc agcagccatg gaagtactga
     6481 cccaggttgt ccgtccctca gccatcatca catctcagga acgagcccag gtagccttca
     6541 agaagatggt tcagggtgtc ctccagtttg ctgtttgtga cacagctgca gccagccagc
     6601 tgatcaagga tggcgttacc caagtcattg tgaatgagga gggtgccgtc cacatggtgg
     6661 ccggagaagg ctcccagttc atcatgcagg aggctgagac ccatggcctg cgggtgccag
     6721 ctgagcatat ggacctggta gagtcagaag gagagatctc tcagatcatt gtaacagaag
     6781 agctggttca agccatggtc cgggaatcca gtagcaactt ccctgagggt gccactcact
     6841 acattgtaac agagttgcct cccggtgtac aggaggacac cggggtttac tcccacactg
     6901 tgatagagac agccagctct ccagagatcc tccaggctgg ggcagcactc agtgctgagg
     6961 ctgtgggtgc aagtagcaca gaacagttga caagcatggt catctacacc caggacggct
     7021 ccccagcagc cacagtgatc cagagccaaa gagaaaacag tgagctccag gaagcatgag
     7081 gcacagggta gtgtgccaag atccccttgg gccagcacag aggtcactga actttgtcat
     7141 gtttacttca gagtgtgctg aacaagccct tcaggcacgg ctaacattgg ccactaaaag
     7201 gcaccaagga gggcagaaag ccaagcctac acctaggttg cccagcagcc taataagaga
     7261 gggtaggctg gtcattgggc cctctgctga tggctcaccc atcacgaacc actggtgaaa
     7321 agcacttttc cctggttttt ctcccgtata agttccctat ttagtcatca aaagatggtg
     7381 tcgcctgctg ggaaacagga agcatctctg gcctcagcac ctgctacgta tggctcgaac
     7441 agccctgtca tctcctccca cattcggtta aaaatcggaa ctaccaagat cacatcttga
     7501 agcagtgaac acattgtttt ttattgttat tttaagtttc agataatggt gttcccagac
     7561 caaaggaagc ctgttaactc atcttatgta gaaatttcct ctctgcgaat ttttagggga
     7621 ttcctttgtc atgaccactc tgcacaagag agacctttct tctgtggttt gagaaaagtc
     7681 ttgaaatttt tattcagtta cagtccacct aggttgaaac aattaattct cattctgaat
     7741 tcatttcata ccataacgtc tgtacatgaa atacccacta tgaaaaatat tattcattgc
     7801 tttttaaaca aatatttgtt tctatcagta tcgtttttgc aggatttatt gtgacttctc
     7861 agagtatggg aaggctgaca ttgaacattg cagtagatgc ctcccccttg ccctgcctcc
     7921 cccagcactg cctgctccag ggccaattca ctgcaagtgc aggatgcagg gtgatgttcc
     7981 ggtgatcttt ctcgattcca ttgctctgtt tgttttgttt ccaaaattgt aaaatagccc
     8041 ccattcctca aaggcaaaat tgttcttgtt gttttctttg aaataaaatt atagtgttaa
     8101 actaaa
//
