LOCUS       NM_001271475            2027 bp    mRNA    linear   ROD 29-MAR-2024
DEFINITION  Rattus norvegicus zinc finger protein 397 (Zfp397), mRNA.
ACCESSION   NM_001271475 XM_003751749
VERSION     NM_001271475.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2027)
  AUTHORS   Wu,Y., Yu,L., Bi,G., Luo,K., Zhou,G. and Zhao,S.
  TITLE     Identification and characterization of two novel human SCAN
            domain-containing zinc finger genes ZNF396 and ZNF397
  JOURNAL   Gene 310, 193-201 (2003)
   PUBMED   12801647
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000018.1.
            
            On Sep 29, 2012 this sequence version replaced XM_003751749.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643292.58997.1,
                                           SRR26643287.34534.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-156               JAXUCZ010000018.1  15516837-15516992
            157-653             JAXUCZ010000018.1  15518407-15518903
            654-795             JAXUCZ010000018.1  15519108-15519249
            796-2027            JAXUCZ010000018.1  15521825-15523056
FEATURES             Location/Qualifiers
     source          1..2027
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="18"
                     /map="18p12"
     gene            1..2027
                     /gene="Zfp397"
                     /gene_synonym="Znf397"
                     /note="zinc finger protein 397"
                     /db_xref="GeneID:100909408"
                     /db_xref="RGD:6504280"
     exon            1..156
                     /gene="Zfp397"
                     /gene_synonym="Znf397"
                     /inference="alignment:Splign:2.1.0"
     exon            157..653
                     /gene="Zfp397"
                     /gene_synonym="Znf397"
                     /inference="alignment:Splign:2.1.0"
     CDS             240..1823
                     /gene="Zfp397"
                     /gene_synonym="Znf397"
                     /codon_start=1
                     /product="zinc finger protein 397"
                     /protein_id="NP_001258404.1"
                     /db_xref="GeneID:100909408"
                     /db_xref="RGD:6504280"
                     /translation="MAMESRAISTLKPQDHQEELILVKIEDSSFSWSQKCKQNGSAQS
                     CQELFRQQFRKFCYHETPGPREALGRLQELCHQWLMPELHTKEQILELLVLEQFLSIL
                     PEELKIWVQQHGPKSGEEVVTLLEDLEKEFDDPGQQVPDNPQGPSVSWKDLTYLRTSQ
                     DSTSIQVRPLKTQLKSWKPCLSSKNDSKNNETTAKEDISEEKAPEFSWDPSFRGVSEH
                     KSNLEWQQRSSPLHRGSFSQVIFTHKSLAKRDHHDESQRCLILSTNSVTCQKVSTDDR
                     PYRCDVCGHSFKQHFSLTQHQRIHTGEKPYKCNQCGKAFSLRSYLIIHQKIHSGEKAY
                     ECNECGKAFNQSSALTRHRKIHTGEKACKCNECGKAFSQSSYLIIHQRIHTGEKPYRC
                     NECGKTFSQSSKLIRHQRIHTGERPYECNECGKAFKQSSELITHQRIHSGEKPYECNE
                     CGKAFSLNSNLIRHQRIHSGEEPYQCNDCGKTFKRSSALVQHQRIHSGDEAYICNECG
                     KAFRHRSVLMRHQRVHDIK"
     exon            654..795
                     /gene="Zfp397"
                     /gene_synonym="Znf397"
                     /inference="alignment:Splign:2.1.0"
     exon            796..2027
                     /gene="Zfp397"
                     /gene_synonym="Znf397"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gctgctcttg cgctgtacct ggggctccgg tcggcgggaa ggcgtgtggc aggtcctgaa
       61 gagacccctc gaccgccgct ttccgctgga caacccccgt ggtgcccctt ctggcacgcg
      121 cctactctgt gctttaaccc ggaagctaaa aataaggaaa gaagaggtta cttgggaaac
      181 tcctccccaa gcacaaaacc caactgtact aagctttttg tgagctattt cagcccagaa
      241 tggctatgga atccagagca atttcaactt taaaacctca ggatcatcaa gaagaattaa
      301 tactcgtgaa aatagaagac agcagctttt cttggagcca gaaatgtaaa cagaatggga
      361 gtgcccagtc ttgccaagaa ctgtttcgcc agcaattcag gaagttttgc tatcatgaaa
      421 cacctgggcc ccgagaggct ctgggaagac tccaggaact ctgccatcag tggctaatgc
      481 cagagttgca cacaaaggag cagatcctgg aactgctagt gctggagcag ttcctgagca
      541 tcctccctga agagctgaag atatgggttc aacagcacgg cccaaagagc ggtgaggaag
      601 ttgtgactct gctggaagat ttggagaaag agtttgatga tccagggcag caggtcccag
      661 ataatccaca aggaccatca gtgtcatgga aagatttgac atatctcaga acatcccaag
      721 attcaacaag catccaagtc cggcctctga agacacagct gaaatcctgg aaaccttgtc
      781 tttcctctaa aaatgattct aagaataatg aaacaacagc aaaagaggac atttcagaag
      841 aaaaagcacc agaattctct tgggatcctt catttagagg tgtcagcgag cacaaaagca
      901 atttagaatg gcagcaaaga agttcccctc tccacagggg cagctttagt caagtgatct
      961 tcacacacaa atccttagca aagagagacc atcatgatga gtctcaaaga tgcttgattc
     1021 taagtacaaa ctctgttaca tgtcagaaag tttctacaga tgacagacct tatagatgtg
     1081 acgtatgtgg gcatagcttt aaacaacatt tctctctaac acaacatcag agaatacaca
     1141 ctggagaaaa gccctataaa tgtaatcagt gtgggaaggc ctttagtttg aggtcatatc
     1201 ttattattca tcagaaaatc catagtggtg aaaaagcata tgagtgcaat gaatgtggaa
     1261 aggccttcaa tcagagctca gctctcacta gacatcggaa aattcataca ggtgagaaag
     1321 cttgtaaatg taatgagtgt ggaaaagcat tcagtcaaag ttcttattta atcatacatc
     1381 aaagaatcca cactggtgag aaaccctaca ggtgtaatga atgtgggaaa acctttagcc
     1441 agagttcaaa gcttattaga caccagcgga ttcatacggg agagagacca tatgaatgta
     1501 atgaatgtgg caaagctttc aagcagagct cagagctgat tacccatcag aggatacaca
     1561 gtggagagaa accttacgaa tgtaacgagt gtggaaaagc cttcagtctg aactcaaacc
     1621 tcataagaca tcagagaatc cacagtggag aggagcctta tcagtgtaat gactgtggca
     1681 aaaccttcaa aaggagctca gcccttgttc agcaccagag aatccactct ggagatgaag
     1741 cttatatatg taatgagtgt gggaaggctt ttaggcacag gtcagtgttg atgcgccatc
     1801 agagagtcca cgatattaag taacttaata caatgatttg taaatacatc cgtatatttt
     1861 tctctattag tcataaggtt gattttggag caagattcca taaaggtagt ttaaaaaaaa
     1921 aagtttttag ttagtctaac ttgctttgtg cagcacttcc ccagtgctaa tgaaaaagat
     1981 acaagaccat cactttaagc tttgtaacat taggaatact caggtta
//
