LOCUS       NM_145724               2449 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus zinc finger protein 394 (Zfp394), mRNA.
ACCESSION   NM_145724 XM_346423
VERSION     NM_145724.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2449)
  AUTHORS   Dovat,S., Gilbert,K.A., Petrovic-Dovat,L. and Rannels,D.E.
  TITLE     Isolation, cloning, and characterization of a novel rat lung zinc
            finger gene, RLZF-Y
  JOURNAL   Biochim Biophys Acta 1442 (2-3), 380-388 (1998)
   PUBMED   9804994
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000012.1.
            
            On Nov 27, 2020 this sequence version replaced NM_145724.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AF052042.1, BC100140.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-566               JAXUCZ010000012.1  14522858-14523423
            567-690             JAXUCZ010000012.1  14526379-14526502
            691-2449            JAXUCZ010000012.1  14529240-14530998
FEATURES             Location/Qualifiers
     source          1..2449
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /map="12p11"
     gene            1..2449
                     /gene="Zfp394"
                     /gene_synonym="Rlzfy; Zfp99; Zkscan14; Znf394"
                     /note="zinc finger protein 394"
                     /db_xref="GeneID:252860"
                     /db_xref="RGD:628654"
     exon            1..566
                     /gene="Zfp394"
                     /gene_synonym="Rlzfy; Zfp99; Zkscan14; Znf394"
                     /inference="alignment:Splign:2.1.0"
     CDS             171..1781
                     /gene="Zfp394"
                     /gene_synonym="Rlzfy; Zfp99; Zkscan14; Znf394"
                     /note="zinc finger with KRAB and SCAN domains 14; zfp-94;
                     zinc finger protein 94; zinc finger protein 99; zinc
                     finger protein Y1 (RLZF-Y)"
                     /codon_start=1
                     /product="zinc finger protein 394"
                     /protein_id="NP_663776.2"
                     /db_xref="GeneID:252860"
                     /db_xref="RGD:628654"
                     /translation="MAAGSGVAPPPLGVGLCAVKVEEDSPGSQEPSGSGDWQNPETSR
                     KQFRQLRYQEVAGPEEALSRLWELCRRWLRPELRSKEQIMELLVLEQFLTILPQELQA
                     YVRDHCPESGEEAAALARTLQRALDGASLQSFATFKDVAESLTWEEWEQLAAARKGFC
                     RESTKDPGSTVGPGLETKAVTTDVILKQEMSKEAESQAWLQEVSQGKVPVFTKCGDTW
                     EDWEERLPKAAELLPLQSSPEEQGRTAIPHLLGVSKDESDSKDNEFGNSGSLVLGQHI
                     QTAEGLVTNGECGEDHKQGLHAKCHTVKPHSSVDSALGLLESQRHFQEGRPYKCDSCE
                     KRFRQRSDLFKHQRTHTGEKPYQCQECGKSFSQSAALVKHQRTHTGEKPYACPECGEC
                     FRQSSHLSRHQRTHGSEKYCKCEECGEIFHISSLFKHQRLHKGERPHKCEVCEKSFKQ
                     RSDLFKHQRIHTGEKPYMCFVCERRFSQSATLIKHQRTHTGEKPYKCFQCGERFRQST
                     HLVRHQRIHHNSVSGLRAEKQHGNFLSW"
     exon            567..690
                     /gene="Zfp394"
                     /gene_synonym="Rlzfy; Zfp99; Zkscan14; Znf394"
                     /inference="alignment:Splign:2.1.0"
     exon            691..2449
                     /gene="Zfp394"
                     /gene_synonym="Rlzfy; Zfp99; Zkscan14; Znf394"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gaactaaaaa gatcgtgtgc gcggatgtgc tgtgtctgta gtgacttttt ccgggcctct
       61 tttttgggag aaggtaccag tctgcctcgg tgaggcagaa aaagtccgtg atgccattgg
      121 gctttgccct tctagaaaac aagctctagc tggacggtcc agaggctcca atggctgcgg
      181 gctctggggt cgccccgcca cctctcggcg ttgggctttg tgcggtgaaa gtggaggagg
      241 actctcccgg gagtcaggag ccctccggtt ccggagattg gcagaatccc gaaacttctc
      301 gaaaacagtt cagacaattg cgctaccagg aagtagccgg ccctgaggag gcgctgagcc
      361 gactttggga gctctgtcgg cggtggctga ggccggagct gcgctccaaa gagcagatca
      421 tggagctact ggtgctggag cagtttctta ccatcctgcc tcaggagctc caggcctacg
      481 tgcgggacca ctgccctgag agcggggagg aggctgcggc tttggcgcgg actctgcaaa
      541 gagcactgga cggggcctcc ctccagagct ttgcaacttt caaggatgtg gctgaatctc
      601 tgacctggga agagtgggag cagctggctg cagctcggaa gggtttctgc cgagagagca
      661 caaaggaccc tgggagcaca gttggccctg gcttggaaac caaagctgtg accacagacg
      721 tgattctaaa gcaagaaatg tcaaaggagg cagagtccca ggcatggcta caagaagtgt
      781 cccagggaaa ggtcccagta tttaccaaat gtggtgatac ctgggaggac tgggaggaac
      841 ggcttccaaa agctgccgaa ttgctgccgc tccagagttc tcctgaagag caaggacgca
      901 ctgccatccc gcatctcctc ggcgtgtcca aagatgaaag cgattctaaa gataatgaat
      961 ttgggaacag cggcagcttg gtccttggtc agcacatcca gacagcagag ggtctggtca
     1021 ccaatggtga atgtggggag gatcacaaac aaggcttaca tgcgaaatgc cacacggtga
     1081 agcctcacag ctctgttgac agtgctttgg ggcttcttga gagccagagg catttccaag
     1141 aaggcagacc ttataagtgt gatagctgcg agaagagatt cagacagcgc tcagacctct
     1201 tcaaacacca gaggactcac acaggtgaga aaccctatca gtgccaagaa tgtgggaaaa
     1261 gcttcagtca gagtgctgcc ctggtgaaac accagcggac acacacaggt gagaagccat
     1321 atgcatgccc agaatgcggg gaatgcttca ggcagagctc acacctcagt cggcatcaga
     1381 gaacccatgg cagcgagaag tactgtaaat gtgaggagtg tggggagatc tttcatatct
     1441 ccagcttatt taaacatcag agactgcata aaggggagag accacacaag tgtgaagtct
     1501 gtgagaagag ctttaaacag cgctcagacc tctttaagca ccagagaatc catacaggag
     1561 agaagcccta catgtgcttt gtctgtgaga gaagattcag tcagagtgca accctcatta
     1621 aacaccagcg aactcacact ggagaaaaac cttataaatg ttttcaatgt ggcgaaagat
     1681 ttagacagag tacacacctt gtccgacacc aaagaatcca tcacaattca gtctctgggc
     1741 ttagggcgga gaagcaacat ggtaacttcc tgagctggtg accctctgga tgcaaagaat
     1801 ggaaatgccc cattcgccta gcgcactgac ccatcgaggg agaaattgac ccctccacag
     1861 ctgcagttta tgcgccaggt acaactagcc cagtggcaga aaacactgcc acagcggcgg
     1921 acctggaaca tcgtgacacc cccccccacc cccccccggg catcggggcc ctggtgttag
     1981 ctatttatgg ttacaccttc tactcagtgg cccaggaaca tttccttgat gagctggaag
     2041 atgaagccaa agatgcccga gcccgagctc ttgagagaga gagagagcat caggacccta
     2101 actgtacgga ccatcctgaa actgctggag cccccgtaca tgttgaatga tgcctggtgg
     2161 tctcacagca tcactggcat aggaactgtg gactatgatt gagcccaaga agccacagac
     2221 tatgcatttg gctactgcca aggggagatt gctcacgtca catgcagttt gtacatttac
     2281 tcagcccctt tttatttcct tgtttgagag gtatgcacga ccttgccttt ccccaaactc
     2341 tgtggtttac ctcttcacct cccaggggcc caactgttaa gggggagggt gtggcctaac
     2401 tgcagagttg gaaccaaagt gggaaagata gggtcaagta aagagtaat
//
