LOCUS       NP_663776                536 aa            linear   ROD 31-MAR-2024
DEFINITION  zinc finger protein 394 [Rattus norvegicus].
ACCESSION   NP_663776 XP_346424
VERSION     NP_663776.2
DBSOURCE    REFSEQ: accession NM_145724.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (residues 1 to 536)
  AUTHORS   Dovat,S., Gilbert,K.A., Petrovic-Dovat,L. and Rannels,D.E.
  TITLE     Isolation, cloning, and characterization of a novel rat lung zinc
            finger gene, RLZF-Y
  JOURNAL   Biochim Biophys Acta 1442 (2-3), 380-388 (1998)
   PUBMED   9804994
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000012.1.
            
            On Nov 27, 2020 this sequence version replaced NP_663776.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AF052042.1, BC100140.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..536
                     /organism="Rattus norvegicus"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /map="12p11"
     Protein         1..536
                     /product="zinc finger protein 394"
                     /note="zinc finger with KRAB and SCAN domains 14; zfp-94;
                     zinc finger protein 94; zinc finger protein 99; zinc
                     finger protein Y1 (RLZF-Y)"
                     /calculated_mol_wt=60708
     Region          18..45
                     /region_name="Disordered.
                     /evidence=ECO:0000256|SAM:MobiDB-lite"
                     /note="propagated from UniProtKB/Swiss-Prot (Q9Z2K3.1)"
     Region          40..151
                     /region_name="SCAN"
                     /note="leucine rich region; smart00431"
                     /db_xref="CDD:128708"
     Region          136..196
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     Region          <225..485
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          330..350
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(335,337,339,341..342,345..346,349,363,365,369..370,
                     373..374,377,391,393,395,397..398,401..402,405)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          358..378
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          386..406
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          414..433
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          441..461
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(446,448,450,452..453,456..457,460,474,476,480..481,
                     484..485,488,502,504,506,508..509,512..513,516)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          465..>518
                     /region_name="SUF4-like"
                     /note="N-terminal domain of Oryza sativa transcription
                     factor SUPPRESSOR OF FRI 4 (OsSUF4), Arabidopsis thaliana
                     SUF4 (AtSUF4), and similar proteins; cd20908"
                     /db_xref="CDD:411020"
     Region          469..490
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:411020"
     Region          469..489
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(474,480,487,489,496,503)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:411020"
     Region          497..517
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:411020"
     Region          497..517
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..536
                     /gene="Zfp394"
                     /gene_synonym="Rlzfy; Zfp99; Zkscan14; Znf394"
                     /coded_by="NM_145724.2:171..1781"
                     /db_xref="GeneID:252860"
                     /db_xref="RGD:628654"
ORIGIN      
        1 maagsgvapp plgvglcavk veedspgsqe psgsgdwqnp etsrkqfrql ryqevagpee
       61 alsrlwelcr rwlrpelrsk eqimellvle qfltilpqel qayvrdhcpe sgeeaaalar
      121 tlqraldgas lqsfatfkdv aesltweewe qlaaarkgfc restkdpgst vgpgletkav
      181 ttdvilkqem skeaesqawl qevsqgkvpv ftkcgdtwed weerlpkaae llplqsspee
      241 qgrtaiphll gvskdesdsk dnefgnsgsl vlgqhiqtae glvtngecge dhkqglhakc
      301 htvkphssvd salgllesqr hfqegrpykc dscekrfrqr sdlfkhqrth tgekpyqcqe
      361 cgksfsqsaa lvkhqrthtg ekpyacpecg ecfrqsshls rhqrthgsek yckceecgei
      421 fhisslfkhq rlhkgerphk cevceksfkq rsdlfkhqri htgekpymcf vcerrfsqsa
      481 tlikhqrtht gekpykcfqc gerfrqsthl vrhqrihhns vsglraekqh gnflsw
//
