LOCUS       NM_019620               1907 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus zinc finger protein 386 (Kruppel-like) (Zfp386),
            mRNA.
ACCESSION   NM_019620
VERSION     NM_019620.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1907)
  AUTHORS   Wang,L., Zheng,A., Yi,L., Xu,C., Ding,M. and Deng,H.
  TITLE     Identification of potential nuclear reprogramming and
            differentiation factors by a novel selection method for cloning
            chromatin-binding proteins
  JOURNAL   Biochem Biophys Res Commun 325 (1), 302-307 (2004)
   PUBMED   15522233
REFERENCE   2  (bases 1 to 1907)
  AUTHORS   Bellefroid,E.J., Sahin,M., Poncelet,D.A., Riviere,M.,
            Bourguignon,C., Martial,J.A., Morris,P.L., Pieler,T., Szpirer,C.
            and Ward,D.C.
  TITLE     Kzf1 - a novel KRAB zinc finger protein encoding gene expressed
            during rat spermatogenesis
  JOURNAL   Biochim Biophys Acta 1398 (3), 321-329 (1998)
   PUBMED   9655926
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000006.1.
            
            On Feb 11, 2021 this sequence version replaced NM_019620.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC078841.1, U67082.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-93                JAXUCZ010000006.1  143109608-143109700
            94-220              JAXUCZ010000006.1  143118136-143118262
            221-1907            JAXUCZ010000006.1  143122580-143124266
FEATURES             Location/Qualifiers
     source          1..1907
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q33"
     gene            1..1907
                     /gene="Zfp386"
                     /gene_synonym="Kzf1; Znf386"
                     /note="zinc finger protein 386 (Kruppel-like)"
                     /db_xref="GeneID:25165"
                     /db_xref="RGD:2985"
     exon            1..93
                     /gene="Zfp386"
                     /gene_synonym="Kzf1; Znf386"
                     /inference="alignment:Splign:2.1.0"
     CDS             85..1854
                     /gene="Zfp386"
                     /gene_synonym="Kzf1; Znf386"
                     /note="Kruppel associated box (KRAB) zinc finger 1"
                     /codon_start=1
                     /product="zinc finger protein 386 (Kruppel-like)"
                     /protein_id="NP_062566.3"
                     /db_xref="GeneID:25165"
                     /db_xref="RGD:2985"
                     /translation="MEMEQLTFRDVAVDFSPDEWECLDPPQQRLYRDVMVENYRNLVS
                     VALSHHCTQNFSPEQILKYSFTKGTNGSCGLKSLYLREDCIYIDESKAHHGRDMQCLI
                     TSNTKDVIDSRDQEHKTALTITPVRPDTLDEPSIYNCKYPQESFQHDLTLKESLEDLI
                     DGLMFHPNSSIDKELRSRGLISTSDQIETFYTERSLLFSQQIAISYDPKHNSIDYGLP
                     AIDPLSHSPNGDTDVWESPFMYKETSKDFSSESLLNNCNDIILEKSSQYNKICNDFDH
                     CSSPNKYQYTLPKKPFNCDNFFTQCSKLSIHQYVQDNCYKSIDCDTMFNKTLNVITHK
                     IQHSQKSYKCNECGKAFKYCSSYRKHRIIHTGEKPFKCKVCGKSFTQCASLKKHQRIH
                     TGEKPYKCEECGRSFNHYSILGQHQRIHTGEKPYKCKQCGKSFTQCSSLQKHQVIHTG
                     EKPFRCAECGKSFTQNSTLSQHQRIHTGEKPYKCEQCGKAFTQCSSLRKHQRIHTGEK
                     PYKCEECGRAFNCRSSFTKHKRIHTGEKPYKCKDCDKAFIHCTNLTQHRRIHTGEKPY
                     KCNECGKSFSQCSNLRKHERIHT"
     exon            94..220
                     /gene="Zfp386"
                     /gene_synonym="Kzf1; Znf386"
                     /inference="alignment:Splign:2.1.0"
     exon            221..1907
                     /gene="Zfp386"
                     /gene_synonym="Kzf1; Znf386"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgacctttgc gttggaaaat gtaggcgtga tttccagctt ttggaagccc cggtgcttta
       61 cgaaatcacg gtagccggag agccatggag atggaacagt tgaccttccg agatgtggct
      121 gttgacttct ctccggatga gtgggaatgc ctggaccctc ctcagcagag gctgtacagg
      181 gacgtgatgg tagagaacta cagaaacctg gtctctgtgg ctctttctca tcattgtacc
      241 cagaactttt caccagaaca gatcctaaaa tattccttca caaaaggaac taatggaagt
      301 tgtggcctta agagtttata cttaagggaa gattgtatat atatagatga gagtaaagcc
      361 caccatggta gagatatgca atgtctaatt acaagcaata ccaaagatgt cattgacagc
      421 agagatcaag aacacaaaac cgctctgaca ataactcctg tgaggccaga tactttggat
      481 gagccaagta tctataactg taaatatcca caggaaagtt ttcagcatga cttaactttg
      541 aaagaaagtt tggaagatct gatagatggg ttaatgtttc acccaaacag ttccatagat
      601 aaagaattaa gaagcagagg actgatatca acaagtgatc aaattgagac tttctatact
      661 gaaagatcct tactcttcag tcagcaaata gctatctcct atgacccaaa gcacaattct
      721 attgattatg gattgcctgc tattgatcca ttatcacata gcccaaatgg cgatacagat
      781 gtgtgggaaa gccctttcat gtataaggaa actagcaaag attttagtag tgaatcttta
      841 ctaaataact gcaatgatat tatcttagag aaatctagtc agtataacaa aatatgtaac
      901 gactttgacc attgctcaag tcccaacaaa tatcagtata ctcttccaaa gaagcctttc
      961 aattgtgata atttctttac tcaatgttca aagctttcta tccatcaata tgttcaagat
     1021 aattgttaca agagtatcga ttgtgacaca atgtttaata aaactttaaa tgttattaca
     1081 cataaaattc agcattccca gaaatcctac aaatgtaatg aatgtggcaa agcctttaaa
     1141 tattgctcaa gttacagaaa acacagaata attcacacag gagaaaaacc cttcaaatgt
     1201 aaagtatgtg gaaaatcctt tacccaatgt gcaagcctta aaaaacatca gagaatccac
     1261 acaggagaga aaccctacaa atgtgaagaa tgtggcagaa gctttaacca ctactcaatt
     1321 cttggtcagc accagaggat tcatacagga gagaaaccct acaagtgtaa acagtgtggg
     1381 aaatccttta ctcaatgttc aagccttcag aaacaccaag taatccacac tggagagaag
     1441 cccttcagat gtgcagaatg tggcaaatcc tttacgcaaa actcaaccct tagtcaacac
     1501 cagagaattc atactggaga aaaaccttac aaatgtgaac agtgtggaaa ggcctttacc
     1561 caatgttcaa gccttagaaa acaccagaga attcacactg gagagaaacc ctacaaatgt
     1621 gaagaatgtg gcagagcctt taactgccgt tcatctttta ctaaacacaa gagaattcac
     1681 acaggagaga aaccttacaa atgtaaagac tgtgacaaag ctttcatcca ctgcacaaac
     1741 cttactcaac accggagaat ccatacagga gagaaaccat acaaatgtaa tgaatgtgga
     1801 aaatccttta gtcagtgttc caaccttaga aaacatgaga gaattcatac atgagtaaaa
     1861 ctaacaaatg taaagaattt agtaaatctt ttatccatag tcaaaaa
//
