LOCUS       NM_001013992            1760 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus zinc finger protein 385D (Zfp385d), mRNA.
ACCESSION   NM_001013992 XM_223794
VERSION     NM_001013992.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1760)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 1760)
  AUTHORS   Gerhard,D.S., Wagner,L., Feingold,E.A., Shenmen,C.M., Grouse,L.H.,
            Schuler,G., Klein,S.L., Old,S., Rasooly,R., Good,P., Guyer,M.,
            Peck,A.M., Derge,J.G., Lipman,D., Collins,F.S., Jang,W., Sherry,S.,
            Feolo,M., Misquitta,L., Lee,E., Rotmistrovsky,K., Greenhut,S.F.,
            Schaefer,C.F., Buetow,K., Bonner,T.I., Haussler,D., Kent,J.,
            Kiekhaus,M., Furey,T., Brent,M., Prange,C., Schreiber,K.,
            Shapiro,N., Bhat,N.K., Hopkins,R.F., Hsie,F., Driscoll,T.,
            Soares,M.B., Casavant,T.L., Scheetz,T.E., Brown-stein,M.J.,
            Usdin,T.B., Toshiyuki,S., Carninci,P., Piao,Y., Dudekula,D.B.,
            Ko,M.S., Kawakami,K., Suzuki,Y., Sugano,S., Gruber,C.E.,
            Smith,M.R., Simmons,B., Moore,T., Waterman,R., Johnson,S.L.,
            Ruan,Y., Wei,C.L., Mathavan,S., Gunaratne,P.H., Wu,J., Garcia,A.M.,
            Hulyk,S.W., Fuh,E., Yuan,Y., Sneed,A., Kowis,C., Hodgson,A.,
            Muzny,D.M., McPherson,J., Gibbs,R.A., Fahey,J., Helton,E.,
            Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M.,
            Madari,A., Young,A.C., Wetherby,K.D., Granite,S.J., Kwong,P.N.,
            Brinkley,C.P., Pearson,R.L., Bouffard,G.G., Blakesly,R.W.,
            Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J.,
            Myers,R.M., Butterfield,Y.S., Griffith,M., Griffith,O.L.,
            Krzywinski,M.I., Liao,N., Morin,R., Palmquist,D., Petrescu,A.S.,
            Skalska,U., Smailus,D.E., Stott,J.M., Schnerch,A., Schein,J.E.,
            Jones,S.J., Holt,R.A., Baross,A., Marra,M.A., Clifton,S.,
            Makowski,K.A., Bosak,S. and Malek,J.
  CONSRTM   MGC Project Team
  TITLE     The status, quality, and expansion of the NIH full-length cDNA
            project: the Mammalian Gene Collection (MGC)
  JOURNAL   Genome Res 14 (10B), 2121-2127 (2004)
   PUBMED   15489334
  REMARK    Erratum:[Genome Res. 2006 Jun;16(6):804. Morrin, Ryan [corrected to
            Morin, Ryan]]
REFERENCE   3  (bases 1 to 1760)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC079278.1.
            
            On Apr 20, 2005 this sequence version replaced XM_223794.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC079278.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760434
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1760
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /map="15p16"
     gene            1..1760
                     /gene="Zfp385d"
                     /gene_synonym="Znf385d"
                     /note="zinc finger protein 385D"
                     /db_xref="GeneID:305691"
                     /db_xref="RGD:1359606"
     exon            1..297
                     /gene="Zfp385d"
                     /gene_synonym="Znf385d"
                     /inference="alignment:Splign:2.1.0"
     CDS             276..1463
                     /gene="Zfp385d"
                     /gene_synonym="Znf385d"
                     /note="zinc finger protein 659"
                     /codon_start=1
                     /product="zinc finger protein 385D"
                     /protein_id="NP_001014014.1"
                     /db_xref="GeneID:305691"
                     /db_xref="RGD:1359606"
                     /translation="MRKIMYFGGTCQSPALPALIHPPAPPLQPSLDIKPFLPFPLDTA
                     ATVNLFPNFNAMDPIQKAVINHTFGFPLPHRKKQIISCNICQLRFNSDSQAAAHYKGT
                     KHAKKLKALESMKNKQKSVTAKDSAKTTFTSITTNPITTSSDKTESTAGTQVIARSAD
                     MRKSSEVTTELTSNAEKSLTAAVAAGNNSSPPTETEEEKAKRLLYCSLCKVAVNSASQ
                     LEAHNSGTKHKTMLEARNGSGTIKAFPRAGMKGKGPVNKGNTGLQNKTFHCEICDVHV
                     NSETQLKQHISSRRHKDRASGKPPKPKYSPYNKLQKAAHPLGVKLVFSKEPSKPLTPR
                     ILPNPLAAAAAAAAVAVNSPFSLRTAPAATLFQTSALPPALLRPAPGPIRTTHTPVLF
                     SPY"
     exon            298..440
                     /gene="Zfp385d"
                     /gene_synonym="Znf385d"
                     /inference="alignment:Splign:2.1.0"
     exon            441..551
                     /gene="Zfp385d"
                     /gene_synonym="Znf385d"
                     /inference="alignment:Splign:2.1.0"
     exon            552..714
                     /gene="Zfp385d"
                     /gene_synonym="Znf385d"
                     /inference="alignment:Splign:2.1.0"
     exon            715..948
                     /gene="Zfp385d"
                     /gene_synonym="Znf385d"
                     /inference="alignment:Splign:2.1.0"
     exon            949..1127
                     /gene="Zfp385d"
                     /gene_synonym="Znf385d"
                     /inference="alignment:Splign:2.1.0"
     exon            1128..1229
                     /gene="Zfp385d"
                     /gene_synonym="Znf385d"
                     /inference="alignment:Splign:2.1.0"
     exon            1230..1737
                     /gene="Zfp385d"
                     /gene_synonym="Znf385d"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gacatagcaa ggaggagtcg agttacagta aggatgggca gtggcgcgcg cggccagagc
       61 acacgctcca gccgcaggga atcgtaggca gaagcctgtt cagctttgct cgcccagccc
      121 gccccggagg aggcacgctc cgcgcctctg cttgtcaagc gtcaagctgg aaacattcac
      181 actgacctta gcatgccacg gctctgctcg gcgtgccaac tctgcgtgcg agcggaggct
      241 gaagacgcca cagtggggtt ccagctggtt gattaatgag aaaaataatg tattttggtg
      301 gcacatgcca gagtcccgct ctcccagccc tgatccatcc gccagcccct cctttgcagc
      361 catcattgga tattaaacct tttctcccct ttcctcttga cactgcagca acagtcaacc
      421 tgtttcccaa ttttaatgcg atggacccta ttcagaaagc tgtaataaac catacattcg
      481 ggtttcctct tcctcatcgg aaaaagcaaa tcatctcatg caacatttgc cagttgagat
      541 ttaattcaga tagccaggct gcggcccact acaaaggcac gaaacatgcc aagaagctca
      601 aagcattgga atccatgaaa aacaagcaga aatctgtcac tgccaaggac agcgcaaaga
      661 ctaccttcac ctccatcacg accaatccca tcaccaccag ctctgacaaa acagaaagta
      721 ccgcagggac ccaagtaata gcaagaagtg cggacatgcg caagagcagt gaagtaacca
      781 ctgagctcac ctctaacgcg gagaaaagcc tcacagcagc agtagccgcg ggcaacaatt
      841 caagtcctcc cacagagact gaggaagaaa aggcgaagag gctgctttac tgctccctat
      901 gcaaggtggc tgtgaactct gcctcccagc tggaggctca caacagtggt actaagcaca
      961 aaaccatgct agaagcacgg aatggaagtg gaactataaa ggcctttccg cgggcaggaa
     1021 tgaagggcaa aggacctgtt aataagggaa acacaggcct ccaaaacaaa acatttcact
     1081 gtgaaatatg tgatgtgcat gtcaactcgg aaacacaact caagcagcac attagcagca
     1141 gaaggcacaa agacagagcc tctgggaagc cccccaaacc taagtacagc ccctacaaca
     1201 aactgcagaa ggcagcacat ccactggggg taaaattggt attttccaaa gaaccttcaa
     1261 agccgctgac tcccagaatt ctccccaatc cattggcagc tgccgcagca gcagctgctg
     1321 tggccgtgaa ttcccccttt agtcttcgaa ccgctccagc agccaccctc ttccagacct
     1381 ccgcacttcc tccagccctt ctgcgaccag ctccgggacc cattcggacg acccacactc
     1441 ctgtgctctt ttctccttat tgaattccaa acaggaggtg ttgtactgca ataattttta
     1501 aaaaaaaaca acaaaaggaa actaaaatca aacagaagag aactatgcag catttattta
     1561 tagtttaaag cgttatctga agagccagga cttttgatag caaaatgaaa agattattta
     1621 aaaaaataaa gttaaaaaaa gcatgggggg ttggggtagg gagagaagag atgtgtcatt
     1681 tttccaaatt aaagcattct tcttgaacat tgattgtttt agaagttatt gccaaaaaaa
     1741 aaaaaaaaaa aaaaaaaaaa
//
