LOCUS       NM_001107736            3800 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus zinc finger protein 385B (Zfp385b), mRNA.
ACCESSION   NM_001107736 XM_001062461 XM_001062588 XM_001062639 XM_001062698
            XM_230026
VERSION     NM_001107736.2
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3800)
  AUTHORS   Iijima,K., Yamada,H., Miharu,M., Imadome,K., Miyagawa,Y.,
            Akimoto,S., Kobayashi,K., Okita,H., Nakazawa,A., Fujiwara,S.,
            Fujimoto,J. and Kiyokawa,N.
  TITLE     ZNF385B is characteristically expressed in germinal center B cells
            and involved in B-cell apoptosis
  JOURNAL   Eur J Immunol 42 (12), 3405-3415 (2012)
   PUBMED   22945289
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000003.1.
            
            [WARNING] On Aug 9, 2024 this sequence was replaced by
            NM_001107736.3.
            
            On Nov 27, 2020 this sequence version replaced NM_001107736.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643429.12068.1,
                                           SRR26360194.1508127.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1358              JAXUCZ010000003.1  83033251-83034608   c
            1359-1501           JAXUCZ010000003.1  82854255-82854397   c
            1502-1612           JAXUCZ010000003.1  82829975-82830085   c
            1613-1775           JAXUCZ010000003.1  82804107-82804269   c
            1776-2021           JAXUCZ010000003.1  82767518-82767763   c
            2022-2200           JAXUCZ010000003.1  82766293-82766471   c
            2201-2302           JAXUCZ010000003.1  82765639-82765740   c
            2303-3800           JAXUCZ010000003.1  82762387-82763884   c
FEATURES             Location/Qualifiers
     source          1..3800
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q24"
     gene            1..3800
                     /gene="Zfp385b"
                     /gene_synonym="Zfp533"
                     /note="zinc finger protein 385B"
                     /db_xref="GeneID:311137"
                     /db_xref="RGD:1311181"
     exon            1..1358
                     /gene="Zfp385b"
                     /gene_synonym="Zfp533"
                     /inference="alignment:Splign:2.1.0"
     CDS             1334..2518
                     /gene="Zfp385b"
                     /gene_synonym="Zfp533"
                     /note="zinc finger protein 533"
                     /codon_start=1
                     /product="zinc finger protein 385B"
                     /protein_id="NP_001101206.1"
                     /db_xref="GeneID:311137"
                     /db_xref="RGD:1311181"
                     /translation="MWSGLPSRGSACHTTTLPALVRTPTLMMQPSLDIKPFMSFPVDS
                     SSAVGLFPNFNTMDPVQKAVINHTFGVSIPPKKKQVISCNVCQLRFNSDSQAEAHYTG
                     SKHAKKVKALEATKNKPKMVPSKDSAKANPSCSVRPGTGDSSDKSEDKGKIKATSSSQ
                     PSGSEGGSFFLKSGTTPLTLGAIASPSKSTNGAPGSVAESEEEKAKKLLYCSLCKVAV
                     NSLSQLEAHNTGSKHKTMVEARNGAGPIKSYPRPGSRLKVQNGSKGSGLQNKTFHCEI
                     CDVHVNSEIQLKQHISSRRHKDRVAGKPLKPKYSPYNKLQRSPSILAAKLAFQKDLMK
                     PLAPTFLSSPLAAAAVSTALSLPPRPSASLFQAAAIPPALLRPGHGPIRATPTSILFA
                     PY"
     exon            1359..1501
                     /gene="Zfp385b"
                     /gene_synonym="Zfp533"
                     /inference="alignment:Splign:2.1.0"
     exon            1502..1612
                     /gene="Zfp385b"
                     /gene_synonym="Zfp533"
                     /inference="alignment:Splign:2.1.0"
     exon            1613..1775
                     /gene="Zfp385b"
                     /gene_synonym="Zfp533"
                     /inference="alignment:Splign:2.1.0"
     exon            1776..2021
                     /gene="Zfp385b"
                     /gene_synonym="Zfp533"
                     /inference="alignment:Splign:2.1.0"
     exon            2022..2200
                     /gene="Zfp385b"
                     /gene_synonym="Zfp533"
                     /inference="alignment:Splign:2.1.0"
     exon            2201..2302
                     /gene="Zfp385b"
                     /gene_synonym="Zfp533"
                     /inference="alignment:Splign:2.1.0"
     exon            2303..3800
                     /gene="Zfp385b"
                     /gene_synonym="Zfp533"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ccaatcgagt ccttcccaga ttctcaagtc aaagatggct ttcctgcaag catcctgatc
       61 tgccccaccc ttacagactc agtgagaacc taaaacctgg cttagaaact ggaacagagc
      121 cttaagtgtg ttctttgtga acgcagcccg ttaggaattg cttcggggtt atctcggtga
      181 ctgatgacgg atgttttgtg tcctgctttg cttctcactt tgcacgctca catcaaagcc
      241 atcatgtgtt ttgctaccaa attactgtta ccttattcct tgtaaagagc acatcagccg
      301 gctcctgcat catatttgtt agtaacaaga gaggaagaac agtctaagaa ggtaaatatt
      361 taaatctggg ggttggctgg ctagaagtgg gatatgtagg tataatgaac ctatatgctt
      421 ttttctttta ctatgagtga agtttcgact ttacagatag actgtctttt acatggtcat
      481 tctttttgtc acacagaata aatttacatt ttcgctgtct gagaacttat ctcagagtta
      541 caccgatagc agcttgttct gggggtagca cagttatgca cgtttccctt gtcaccttaa
      601 ttcactgagg acacttaaga gttaaaggat atttaacctg cttcttaata gacattgtca
      661 aatatatgga aaaccttcat tgtagctgtc acaggctctg gtgacttcag ttgtgaatga
      721 agaagtcctg ggaagctaca gctatttaga tttttgcagc cttagtgcct ggcgctttgg
      781 cgagagacta gtgatttctt ctctgtaccc tgcttattgt tgaaaagccg gagctatttt
      841 taaacattca cacaattttg aaagacgatt cttcattctg caaggtttgt tgctaaatct
      901 gcggagcctt tcataattac acccttttgg tggtttgcct gaatttgatc acagtggctg
      961 atttcatgca ttgataatga aggctgaggt tgcctgtttc tcggcacaca tccacctccg
     1021 actcgtacgt tgacagtgct gctggtttct gcacgcgtag agatccagat tgaaactgct
     1081 ctgctttctt aacaaatgac tcagagcgtg ttcgtccttc cctaaaatgc tgccagcgtg
     1141 taaaggattt tcaatgagag cgaaataagc cagccccggg aaggttctga gcgtcactga
     1201 tgtagtgtgg ggctgtcacg gataatcagg ctggatccaa gtcccggtag cactgtacat
     1261 cacactggcc gcatcctgga agttttgttt atctaacttg gttgctcgtg aggctgctga
     1321 aatccctggc agaatgtgga gtggacttcc cagcagaggc agcgcatgcc acaccactac
     1381 ccttcctgct ctcgtgcgca cacccaccct gatgatgcag ccttcgctgg acatcaaacc
     1441 gtttatgtct tttccagtgg acagtagctc cgccgtaggg ctctttccga actttaacac
     1501 aatggacccc gtgcagaaag cagtcattaa ccacacgttt ggagtctcca ttcccccaaa
     1561 gaagaaacaa gttatctctt gtaatgtctg tcagcttcgc tttaactcgg atagccaggc
     1621 cgaggcccac tacacaggaa gtaaacatgc caagaaggtc aaagctctag aggcaacgaa
     1681 aaacaaaccc aaaatggttc cttccaagga cagcgcaaag gctaatccca gctgctccgt
     1741 caggccaggc acaggcgaca gctctgacaa atcagaagac aaaggaaaga taaaagccac
     1801 cagttccagt cagccctcag gctccgaagg aggctccttt ttcctcaaat ctggcacaac
     1861 acctctgaca cttggagcca ttgcttctcc ctccaagagc acaaatggag ctccggggtc
     1921 tgttgctgag tcagaagaag aaaaagccaa aaaattactc tactgctcgc tatgcaaggt
     1981 ggcagtgaac tccttgtcac agctggaggc tcacaataca ggatctaaac acaagaccat
     2041 ggttgaggct cgtaatggag ctggtccaat taagtcctat ccaagacctg ggtcaagatt
     2101 aaaggtgcag aatggcagta agggttcagg actgcagaac aaaacatttc attgtgaaat
     2161 ctgtgatgtt catgtgaact cagaaattca actcaaacag cacatttcaa gccgaaggca
     2221 taaagaccgc gtggcaggaa agccattgaa gccgaaatac agcccctaca acaagctcca
     2281 gaggagccca agcatcttgg cggcaaagct tgcattccag aaagatctga tgaagcctct
     2341 ggccccgact ttcctgtctt cacccctggc ggccgcagct gtgtccactg cgctgtccct
     2401 gccacctcgg ccatctgcct ctctcttcca ggctgcagcc atccctcctg cactgctgag
     2461 gcctggccac gggcccatcc gggccacgcc cacctccatc ctctttgccc cttactaaac
     2521 actgggagcc cgcccgcccg cgacaggcca ggccagtggg aaggtgtaga cgaacagccc
     2581 aaaggattca gcagtgtaag ccctgtgtgt gactgtaagt accccaccta cgcacttaca
     2641 aagtgcaggc caccgcccag ccccacctcc agacacaggc ggaggccaag ctcaagggca
     2701 ccgtctcttc ccgtgccctc tccaccctac ccctgccaat tggtgtatct gagatactta
     2761 agtttcttga aaatatattg atcagaaaaa gaaaaccgac ctgtgtgttc ccatgacatg
     2821 gtgatctggc ttagaaacaa aatggaatct cttcctgaca gacttgaaca ggaagtaggc
     2881 tcttctccgg atgtctgtaa ataactccag aatccaagcg ggcgtattct agtgtggaac
     2941 aaaagtccat cgcaagtgct taattgtgga taccatcttc cccacggccc atggcgtgtt
     3001 ttttttttct tttctggtgt actagtgtcc acagggattg tgtactgttc tagacccgag
     3061 tactgttgta ccccgtgtag tactagatcg taactctcgt tgaattaaac tttttttttc
     3121 attgctgtgt aattgttagg aagcagagta gctttgaaat tttttctctc taagagaaca
     3181 aaagataatg tattttcttt atttcatatt ttatttggag atatttaaac gaaatagaaa
     3241 gccatataac atagctataa ttactacctg tttgctattt ttgttttaac ttatttttgt
     3301 agcatcctca ctggtttgag ttgctaagca aatgtataca gaaacaaaaa gagcttccta
     3361 aattgcacat ttttttgcaa cttctgtgca tctgcaagag gacagtgaat ctgtgtgttt
     3421 ctacataaag gtcttcattt taaacctctg tttttcatcg gtaacgatgc tacataactc
     3481 tgtggctccc tgacgcaata atgtacagaa gatacataat ttataattga acaatctgtc
     3541 caatgactgt gtcgcaggtc atgtgaccac gcttcccctt ccccacccct accccctagg
     3601 gacccccacc ccccctgctg caaaaaaaac aaaaacaaaa aactgatgtt aagaagactg
     3661 gaatgtttgt gatatcaggg gcaagaggta tcataaaaca acagcataga gcgagctctt
     3721 ttagagggcc tatatctgca atctgtaaat ggtaaaatgt ctgtgtattt ttttaaatgt
     3781 accttttcaa taaaagtacc
//
