LOCUS       XM_039106963            3441 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 384 (Zfp384),
            transcript variant X4, mRNA.
ACCESSION   XM_039106963
VERSION     XM_039106963.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3441
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3441
                     /gene="Zfp384"
                     /gene_synonym="Ciz; Nmp4; Znf384"
                     /note="zinc finger protein 384; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 30
                     ESTs, 1 long SRA read, 2 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 74 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:171018"
                     /db_xref="RGD:708346"
     CDS             105..2006
                     /gene="Zfp384"
                     /gene_synonym="Ciz; Nmp4; Znf384"
                     /codon_start=1
                     /product="zinc finger protein 384 isoform X4"
                     /protein_id="XP_038962891.1"
                     /db_xref="GeneID:171018"
                     /db_xref="RGD:708346"
                     /translation="MPARPASRPLSRALRALPLPRLLPFPVNAAPPARWLWRWRRRRR
                     RRLKVQEPWKGEGIRRQEEEREGRMEESHFNSNPYFWPSIPTVSGQIENTMFINKMKD
                     QLLPEKGCGLAPPHYPTLLTVPASVSLSSGISMDTESKSEQLTPHSQASVTQNITVVP
                     VPSTGLMTAGPGLVITSPSGSLVTTASSAQTFPISTPMIVSALPPGSQALQVVPDLSK
                     KVASTLTEEGGGGGGGGGTVAPPKPPRGRKKKRMLESGLPEMNDPYVLAPGDDDDHQK
                     DGKTYRCRMCSLTFYSKSEMQIHSKSHTETKPHKCPHCSKTFANSSYLAQHIRIHSGA
                     KPYSCNFCEKSFRQLSHLQQHTRIHSKMHTETIKPHKCPHCSKTFANTSYLAQHLRIH
                     SGAKPYNCSYCQKAFRQLSHLQQHTRIHTGDRPYKCAHPGCEKAFTQLSNLQSHRRQH
                     NKDKPFKCHNCHRAYTDAASLEAHLSTHTVKHAKVYTCTICSRAYTSETYLMKHMRKH
                     NPPDLQQQVQAAAAAAAVAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQASQASQQQQQ
                     QQPPPPQPPHFQSPGAAPQGGGGGDSNQNPPPQCSFDLTPYKPAEHHKDICLTVTTST
                     IQVEHLASS"
ORIGIN      
        1 gttcaggagg gcggggggcc tatacgctgc ctcgcgcccc cgccctgcgg gtgtgtagcg
       61 cgtagcccgt gcgagtgtag gggtctgtct cgcgcctgca gtgcatgccc gcgcgcccgg
      121 cctcgcgtcc cctgtcccgc gccctgcgag ccctcccact ccctcggctc cttcctttcc
      181 cagtgaacgc cgcccctccc gcgcgctggc tctggcgctg gcgccggcgc cgtcgccgcc
      241 gcctgaaagt tcaggagccc tggaaaggag aaggaataag acgacaggag gaagagagag
      301 aggggagaat ggaagagtct cacttcaatt ctaacccgta cttctggcct tctatcccca
      361 cggtctcagg gcagattgaa aacactatgt tcatcaacaa gatgaaggat cagctgttgc
      421 cagagaaggg ctgtggactg gcaccacctc actatcccac tttgctgaca gtgcctgcct
      481 cagtgtccct gtcctctggc atcagcatgg acacagagtc caagtcagaa cagctgaccc
      541 cacacagtca ggcatctgtt acccagaaca tcacagtggt ccctgtacca tctacaggac
      601 tcatgactgc gggtcctggt ttggtaatca catccccttc aggctctctt gtgaccacag
      661 cctcatcagc tcagactttc cctatctcga ctcccatgat tgtctcagct cttccccctg
      721 gctcacaagc cctacaggtg gtccctgacc tctccaagaa ggtagcatca accctaactg
      781 aggaaggagg cggaggtggt ggtggaggtg gcactgtggc tcctcctaaa cctcctcggg
      841 gccgcaagaa gaagcggatg ctggaatcag ggcttcctga gatgaatgac ccttacgtcc
      901 ttgcccctgg ggatgacgat gaccatcaga aagatggcaa gacctacagg tgccggatgt
      961 gctcactgac cttctactca aagtcggaga tgcagatcca ctccaagtca cacaccgaga
     1021 ccaagcccca caagtgccca cactgctcca agaccttcgc caacagctcc tacctggccc
     1081 agcacatccg tatccattca ggggccaagc cctatagttg taacttttgt gagaaatcct
     1141 tccgtcagct ctcacacctg cagcagcaca cccggattca ctccaagatg cacacggaga
     1201 ccatcaagcc ccacaagtgc ccgcactgct ccaagacctt cgccaacacc tcctacctgg
     1261 cccagcacct ccgtatccac tcgggggcca agccctacaa ctgttcctac tgccagaagg
     1321 ccttccgcca gctctcccac ctccagcagc acacacgaat ccacactggc gatagaccat
     1381 acaaatgtgc acacccgggc tgcgagaagg ctttcacaca actctccaac ctgcagtctc
     1441 acagacggca gcacaacaaa gataaaccct tcaagtgcca caactgtcac cgagcataca
     1501 cagacgcagc ctcactagag gctcatttat ctacacacac agtgaagcac gccaaggttt
     1561 atacctgcac aatctgtagt cgggcatata catcagaaac atatcttatg aaacatatgc
     1621 gcaaacacaa ccctcctgat ctccaacaac aagtgcaagc ggcggcagcg gcagcggcag
     1681 tggcccaggc tcaggcccag gctcaggctc aggcccaggc ccaggctcag gcccaggccc
     1741 aggcccaggc tcaggctcag gcccaggccc aagcttcaca ggcatcacag cagcagcaac
     1801 agcagcagcc accacctcca caaccaccac acttccagtc tcctggggca gctccccagg
     1861 gagggggtgg tggggacagc aaccagaacc ctccacccca gtgttccttt gacctgaccc
     1921 cctataagcc ggcagagcat cataaagaca tctgcctcac tgtcaccacc agcaccatcc
     1981 aggtggaaca cctggccagc tcttagagat ccgtactgcc atccattgga aaggggagaa
     2041 gtcctggtcc ctcctttgtc aactcttctt ggtgggaaag ttctcttctt ccttgacaag
     2101 tcctgtctcc agctccttgg gtctcaggca tggcttttct tcgcaagata accatcctta
     2161 atctcagctg ctcctgattg gccaaggaat cctgagctga tagtgttatc caacagcccc
     2221 catccaagca gagcttttaa aactggggct tggtgcttga gagaaggatc cgctgtaacc
     2281 tcacatcttg tccagtgtgt gggcgattac ctttctctcc atcctcaaag ttggggctga
     2341 tagaagacta gtggctggcc ctcccagata acagagaagg aagctctaaa tgtcgccagc
     2401 cttccgttct atgcttacct gtaaaagaac agattttgca cgtggcctga tccctgtgag
     2461 ccattttctt ccccttacat ggtctcactt catattgggt ggtgactata ccttttttat
     2521 ttgtaagggg ggcaatagct gatacatggt caccaaggtg ccagagattc cccaggtgac
     2581 caacggtggc ttaagagtgt gagttaccat ttttccttac aacctccttc cttctctgcc
     2641 aaccaagggc ctatatactc agtctcacta ccccagtcca aggagctctg ggagctgtgt
     2701 aagctgtgtt ctctgcgatg ccatctgggc tttgcagaga agggagaatt cagggcacac
     2761 acaggactgg acttagcctc cctaggtgcc acggtcagat gccggacatg gatttatata
     2821 taaatatata tatataaata tatatatata cctgctcatc acggccatct ttgttgtaac
     2881 catttctgtg tttataaatg cattatctct gagaattttc atattgatgt tttatttttg
     2941 tcttattttt tttttctcca ccttgtcctc tggccatggc attttaattt tcttttccct
     3001 ttcaattttt ttaatcatgg gaaatttcag ataaaagaaa attaaaataa tcaggaatta
     3061 tacagttgtt ataaagcaat ttaaaaatga aaaacttatg tacaaactaa ggggtgtttt
     3121 tagaacattg tacagaaata aatttgtgtt taaggatgag aggcagtaag cagctgatgt
     3181 aagctagcat gggaaaagac tatttgggga gctattccag gacagcacta aggatttaaa
     3241 ctggaacgtg tggagaatgg atgcttgggt ggtaagctac catatgtttt attccaaggc
     3301 catttttagt ttaggaacat ttgtgtacag attctgccat agagattgca cgcctactta
     3361 tgtgagacaa gaattcattt aacaaaatgg ctatattcct taccctttgc cctcaaaaac
     3421 aaaaacaaaa aacaaaaaaa a
//
