LOCUS       XM_008762566            5117 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 334 (Zfp334),
            transcript variant X1, mRNA.
ACCESSION   XM_008762566
VERSION     XM_008762566.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008762566.4.
            
            On Jan 21, 2021 this sequence version replaced XM_008762566.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5117
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5117
                     /gene="Zfp334"
                     /note="zinc finger protein 334; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 13
                     ESTs, 1 long SRA read, 5 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 140 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:685574"
                     /db_xref="RGD:1592574"
     CDS             398..2434
                     /gene="Zfp334"
                     /codon_start=1
                     /product="zinc finger protein 334"
                     /protein_id="XP_008760788.1"
                     /db_xref="GeneID:685574"
                     /db_xref="RGD:1592574"
                     /translation="MDSTQTSVSFKDLTVDFTREEWQYLGPAQRLLYRDVMLENYSNL
                     IALGFRVSKPDVILKLEQGEEPWIVEDLSHQNLSHAGDDDALEKDKRTQDKHLKQLLV
                     INNKTTSEKANLFEKTVALDTNSVSSGKMLHKYDPGGNGLKNNSEDTVIKPSKANGKV
                     AAEHDGRGKPALHTKADRSHSAAKRIKWSEVGDVRSQGEDLTQQLNNQAVSQPSEHNE
                     GEQESACTKECPERKRNECAECRKTFSKRSTLIVHLRIHTGERPYACNYCRKTFRIKA
                     SLTRHQRIHTGERPYKCKECGKAFIDKSALIVHQRIHGGEKSYECIECGKTFFRKSAL
                     AEHFRSHTGEKPYKCKECGNAFGKKSYLIVHQRTHRGEKPNECKECGKTFFCLSALTA
                     HQRIHTGEKPYECKECDKTFFCQSALNVHLRSHTGEKPYKCRQCGKFLCTKSALVAHQ
                     VIHRGKKSFECGECGKLFYLKSTLTIHQRTHTGEKHGVLSKWSRPSTGKSNCGEQKRV
                     EAKENLHECHDHKRTAHKSSRRVAHKRTIWERPYECQECGRTYCRKSALRHHQKTHTG
                     ERPYECKECGKTFCQKVSFTEHQRTHTGEKPHKCKECGKSFRHKSAFTVHKRIHTGEK
                     PYACNECGKSYRRLWTLTEHQKIHTGEKPYECSICKKSFRHKSNFLLHQKTHKK"
ORIGIN      
        1 ccgaggctct gcgcatgcgc cgtttcctag cctctatgga tacgtttccg tttcgctggg
       61 ctcttccagg cgaggctcga ggggcccctg tgcgccacgg ttgcctgggg ccttctggga
      121 gctacaaaag aagcaaggtt ttccccgggc cagaggaaaa cggagtggcg actccggggc
      181 aggatcagaa agaccagcgc cttcctgggg cccgcggagg ctcgcgcgtg tccaggggtc
      241 gggcgaggca acagagcatc cccgggctgc aggcctccgg gcgggcagcc tgggagagag
      301 gtgtgtgcgt gcaaaaatcg gatcccacca gtcttgcgga tgcccttggc ccgcccttcg
      361 gtcactgttc ctggcccttt cttgagaaca cctgaaaatg gacagtaccc agacatcagt
      421 ctccttcaag gacttgactg tggacttcac ccgtgaggaa tggcaatatc tgggccctgc
      481 gcagcgcctc ctgtacagag atgtgatgct ggagaactac agtaacctca tcgcactggg
      541 gtttcgtgtt agcaaaccag atgtgatcct aaaactggag caaggggaag agccctggat
      601 cgtggaagac ttgtcacatc agaacttgtc acatgcagga gatgatgacg ccttagagaa
      661 ggacaagagg acacaagaca aacatttgaa gcagctctta gtcatcaata acaaaacgac
      721 atcagaaaaa gccaatctgt ttgagaaaac agttgctctc gacacgaaca gtgtttcttc
      781 ggggaaaatg ctccataaat acgatccagg tggaaatggc ctaaaaaata attcagaaga
      841 cactgtcata aagccaagca aagccaatgg gaaggtagct gctgagcatg atgggagggg
      901 gaagccagcg ctccacacga aggctgacag aagtcattct gcagcaaagc ggatcaaatg
      961 gagtgaagtc ggggatgtta ggagtcaagg tgaggatctc actcaacagc tgaataacca
     1021 ggctgtaagt cagccctctg aacacaatga aggtgaacag gagtcagcct gcaccaagga
     1081 gtgtcctgaa cgaaagcgga atgagtgtgc ggagtgtagg aaaacctttt ctaagaggtc
     1141 caccctcatt gtacacctgc ggatccacac aggagagagg ccctatgctt gcaattactg
     1201 caggaaaact ttccgaataa aagcaagtct cactcggcac caacggatcc acaccgggga
     1261 gaggccttac aagtgcaagg agtgtgggaa agccttcatc gacaagtctg ccctcatcgt
     1321 gcaccagagg atccacggcg gggagaagtc ctacgagtgc atcgagtgtg ggaagacctt
     1381 cttccggaag tcagccctgg ctgagcattt tagatcccac accggggaga agccttacaa
     1441 gtgcaaggag tgtgggaacg cctttggcaa gaagtcgtac ctcattgtgc accaaagaac
     1501 tcaccggggc gagaagccca atgagtgtaa ggagtgtggc aaaaccttct tctgtctctc
     1561 cgccctgaca gcacatcaga ggatccacac cggggaaaag ccctatgagt gtaaggagtg
     1621 tgacaaaacc ttcttctgtc agtcggcgct caatgttcac ctgagaagcc acaccggcga
     1681 gaagccctac aaatgccggc agtgtggaaa gtttctgtgc actaagtctg ccttggtcgc
     1741 gcatcaggtg attcacagag gaaagaagtc ctttgaatgt ggcgagtgcg ggaagctttt
     1801 ctacctgaag tccaccctca cgatacatca gaggactcac acaggggaga agcacggcgt
     1861 gcttagtaaa tggagccgac cctccactgg gaagtccaac tgtggcgagc agaaaagagt
     1921 ggaggcaaag gagaatctgc acgagtgtca tgatcacaag cggacagccc acaagagctc
     1981 acgccgcgtc gcccacaaga gaaccatatg ggagagacct tacgagtgtc aggaatgtgg
     2041 gcggacctac tgccggaagt cagctctcag gcaccaccag aagacacaca ccggagagag
     2101 gccctacgag tgcaaagagt gcgggaagac cttctgccag aaggtctcct ttactgagca
     2161 ccagcgaact catactgggg agaaaccaca caagtgcaag gaatgtggga agtccttccg
     2221 ccataagtca gccttcacag tgcataagag aatccacaca ggagagaaac cgtacgcatg
     2281 caatgaatgt ggaaaaagct accgccggct ctggactctg actgaacatc agaaaataca
     2341 cacaggggag aaaccctatg aatgtagcat atgtaagaaa tcatttcgcc acaaatcaaa
     2401 cttcctttta catcagaaaa ctcacaagaa gtaaattcca acaaggcaac aacagatcat
     2461 ttacataatg cttaagtcct gaattacaca taaaggtgtg agtccttgtc agcacaggga
     2521 ccgttgcgaa aggcagccct gtttcaaaca ccagagagct cacgtgggcc acgtacagag
     2581 tttgttttat ggacgctgga cattcagtgt taactatgaa gacattcagc attttaaaca
     2641 ttataccagg tgtgcctgcc tcccttccga tcacagaaca aacactaatt cctacctgac
     2701 ctccctccac agttaatttg catagcgtat gttgccggat gtgagtagcc agcattgact
     2761 ccagatcatt gctcctgtgg taactgagta gtttctgttt atgagtttcc agtattaaca
     2821 cctcagacta cacaaccatc cgtcctctgt ccctcctgtc tagtgacagg tcctaatccc
     2881 tttctctgca aaggtgagtc ggacgaacca cccttcactt catgcctgtg gcgactccca
     2941 cacaggagtg agcatttgct gaagcgagtc cgtggagttc tctagtgaga ggcacaggca
     3001 gcttgtaagt gcctccttga gcttccatgc aagccaagac aacagcgact gcggttacca
     3061 tagcaaaacc aaaaatgaat tgagcagatc tgaatagtga agaggatttg gggagtgttc
     3121 gagtcaaaac agtgtctgtg ttgttcatgt tttaaatacc tctgttctat tagcggtttg
     3181 attatatcag tgctttcaaa aataccttga tttttttttt aatgaacatg tccatagggg
     3241 tatgatttag aatttatctg tcagcttctg agaaaatgtc tccatcgtgc caaatagaat
     3301 cacgtagtgt ggatgtgtgc acctagccag aatgcccgcc attcttggtg ggttattgcc
     3361 aactcctggt atccagccac aagtggaatt ttccacaaac ccagccccgc tctctgatgt
     3421 gctgtgcatt ttatagaaca atgaagtgag tttaatttca ttgacaaaac aaagaagggc
     3481 ctctgggtat cttgtcctgg gcaaatcagc ccttggtggg gccaaagtaa gttgtattgt
     3541 ccaacgtagt cttggtactg agtctcattc tgacccgtct gctgcctgta cttgtgacgc
     3601 tgggttctgg ggtgggaaaa gctccccttt gtttgagacc catcagaaat cccagtaggg
     3661 acaagatgac ctggtcattc agtttatatc cttcagtaag gtaaatgcat atttgtgaat
     3721 gcacacacat ttgatatgta cgaatacatg ctaagacatg aatgtatgca tatatcaata
     3781 gtaatctttt cctgaagatt ttaataatta cttgaaagat ttgggtgctg ttgcgaacgc
     3841 agttttatca tccgctttta gagttactga tgggggcttg acaaggatta gcaagcaaag
     3901 gcgcttgctg gcaagcctga ggacctgagt tcgatccctg ggacccacat aatagaactg
     3961 attttcctac aagttaccct gacttccacg agggtgatgt ggcatacaca cacaacaaat
     4021 acataccaca cacacacaca cacacacaca cacactaaat aaataaataa ataaataaat
     4081 aaataaatat aaaaactcac tgataggatt cttaagcatt tttaccacat ttgccaaaat
     4141 gcattcctca tacttaactt ttctttgctt ggtcacagct ccttgtagag gatgttggtg
     4201 agctgtcttg gggaggtaat ttcattcttc aaagatatat accctaactg tctaatcgtg
     4261 ccttctgctt gccgtgggtt atgcaacaag tcaccagtct tgtgatcacg gagttgtttg
     4321 tctttactgg tttgacctag tctatagaag ggagagctgt atgctggggg gaacggattt
     4381 tttgtttttc aagcctgatg agaaaaatgc aagtccataa agggaaagtc gtgagaccca
     4441 atcacagaaa gtcacgagtg aaacttgtcg gtcctgtgag aggactcagc tggtaacggt
     4501 gcttgttcta caagccagca tcccgagaca cctgtaaatg tgacagagag atccggctcc
     4561 acaaggttgt cctctgacca tacatggacc gccgacccac gcacatacaa taacagtgca
     4621 gtttttaaaa aataacttga agacacataa aaaattctaa agcaattaaa tggaagaaga
     4681 tccttaaaag caactaaagg gaacggcgac ttgtagggtc tgtgaacttc ctgcagctgc
     4741 tgtaagaaac tgtcataacc atcggaagag tggatctcct ctcacaggac ccgagacagc
     4801 cagtcagacc cagtgttgca accctctgac aactggaggc tggctaggct tgcttctccc
     4861 atgtggtgtc ctgcagcttg tgccaacgag acttcaggct ttgcatctgt cctcactgag
     4921 catgtctgtc tacgtttccg ttttttcagg acatgtctga tcaaggtccc atcttactca
     4981 ggcatgacct catgttgact gacatctgta aaaagcctta tcccataagg tcacattgaa
     5041 agtattagag gctgagggga cattattggt actctaaaac ttaccccatg tttaccacat
     5101 taaaataaca gatattt
//
