LOCUS       NM_001107008            5339 bp    mRNA    linear   ROD 27-MAR-2024
DEFINITION  Rattus norvegicus zinc finger protein 287 (Zfp287), mRNA.
ACCESSION   NM_001107008 XM_001078159 XM_220549
VERSION     NM_001107008.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 5339)
  AUTHORS   Blanchard,A.D., Page,K.R., Watkin,H., Hayward,P., Wong,T.,
            Bartholomew,M., Quint,D.J., Daly,M., Garcia-Lopez,J. and
            Champion,B.R.
  TITLE     Identification and characterization of SKAT-2, a novel Th2-specific
            zinc finger gene
  JOURNAL   Eur J Immunol 30 (11), 3100-3110 (2000)
   PUBMED   11093124
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000010.1.
            
            On Jan 1, 2009 this sequence version replaced NM_001107008.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643429.37109.1,
                                           SRR26643298.61145.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760393,
                                           SAMN12840108 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-403               JAXUCZ010000010.1  47912995-47913397   c
            404-495             JAXUCZ010000010.1  47912261-47912352   c
            496-622             JAXUCZ010000010.1  47910029-47910155   c
            623-709             JAXUCZ010000010.1  47909582-47909668   c
            710-5339            JAXUCZ010000010.1  47896517-47901146   c
FEATURES             Location/Qualifiers
     source          1..5339
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q23"
     gene            1..5339
                     /gene="Zfp287"
                     /gene_synonym="Znf287"
                     /note="zinc finger protein 287"
                     /db_xref="GeneID:303212"
                     /db_xref="RGD:1308617"
     CDS             1..2289
                     /gene="Zfp287"
                     /gene_synonym="Znf287"
                     /codon_start=1
                     /product="zinc finger protein 287"
                     /protein_id="NP_001100478.1"
                     /db_xref="GeneID:303212"
                     /db_xref="RGD:1308617"
                     /translation="MLASRKKVANSSRSQVLLMWKPDKIQNGPCNAEKQILTSRLLRD
                     AETCRQNFRNFPYPDVAGPRKALSQLRELCLKWLRPEVHSKEQILELLVLEQFLSILP
                     GEVRTWVNSQYPENSEEVVALVEDLAQILEEEAPQNSALPQEIPEEDPKHALETGWLN
                     DLVTKESVTFNDVAVDITQEDWELMRPVEKELYKTVTLQNYWNMVSLGLTVYRPTVIP
                     ILEEPWMVIKEIVEGPSPEWETKAQACSPLKDFPKLKQDGTQTIKLEESCDCEDGLER
                     QPAYAFRKIHIDEDDFSLKSELSQEDPTEECLSKYDLYRDNFEKHTNLIIQFDTQSDS
                     KTLLYNESKPTFTNVSSGGVVHGKILPGDKPYSCNVCGKKFRKYPSLLAHRNNHAKDK
                     SYECEECGKEFKHLSSLIAHQRMHTGEKPYECHQCGKAFSQRAHLTIHQRIHTGEKPY
                     KCNDCGKDFSQRAHLTIHQRTHTGEKPYKCLECSKTFSHSSSLINHQRVHTGEKPYIC
                     NECGKTFSQSTHLLQHQKIHTGKKPYKCNECWKVFSQSTYLIRHQRIHSGEKCYKCTE
                     CGKAFAHSSTLIQHQTTHTGEKSYICNVCGKAFSQSANLTQHHRTHTGEKPYKCSVCG
                     KAFSQSVHLTQHQRIHNGEKPFKCNTCGKAYRQGANLTQHQRVHTGEKPYKCHHCGKA
                     FIYSSSLNQHRRTHTGERPYKCTHCNKDFSQRTCLIQHQRIHTGERPYGCRICGKSFT
                     QSTNLIQHQRVHMGARHRNGQI"
     exon            1..403
                     /gene="Zfp287"
                     /gene_synonym="Znf287"
                     /inference="alignment:Splign:2.1.0"
     exon            404..495
                     /gene="Zfp287"
                     /gene_synonym="Znf287"
                     /inference="alignment:Splign:2.1.0"
     exon            496..622
                     /gene="Zfp287"
                     /gene_synonym="Znf287"
                     /inference="alignment:Splign:2.1.0"
     exon            623..709
                     /gene="Zfp287"
                     /gene_synonym="Znf287"
                     /inference="alignment:Splign:2.1.0"
     exon            710..5339
                     /gene="Zfp287"
                     /gene_synonym="Znf287"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgttagcct caagaaagaa ggtggcaaat tcttcacgct cacaagtcct tctaatgtgg
       61 aagccagaca agattcaaaa cggaccctgc aatgctgaga agcaaatcct cacctcgaga
      121 ctcttgcgtg acgctgaaac ctgtcgacag aattttagaa attttccata cccagatgtg
      181 gcaggtcctc ggaaagcatt gagccagctc cgagagctct gcctgaagtg gctgagacct
      241 gaagttcatt ccaaggaaca aattctggag ttgctggtgc tggagcagtt tctaagcatc
      301 ttgcctgggg aggttaggac ttgggtaaat tctcagtacc cagagaacag cgaggaagtg
      361 gtggctttgg tggaggatct ggcacagatt ctagaagagg aagctcctca gaattctgcc
      421 cttccccaag aaatcccaga ggaagacccc aaacatgctc tcgagacagg gtggctcaat
      481 gacttggtga ccaaagaatc agtgacattc aatgacgtgg ctgtggacat cacccaagag
      541 gactgggaac tgatgcgccc tgttgagaag gaactgtata agactgtgac gttacagaac
      601 tattggaaca tggtttctct gggactgacc gtgtacaggc caactgtgat tcccatctta
      661 gaagagccat ggatggtgat aaaagaaatt gtagaaggcc ctagtccaga atgggaaact
      721 aaagctcaag catgtagtcc attaaaggat tttcctaaac tcaaacaaga tggaacccaa
      781 accataaaac tggaagaatc ctgtgactgt gaagacggct tagagaggca gccagcgtat
      841 gccttcagga agattcacat agatgaagat gacttcagtt tgaagtcaga gctttcacaa
      901 gaagacccta cagaagaatg tcttagtaaa tatgacctat atagagataa ttttgaaaag
      961 cacaccaacc taattataca gtttgatacg cagtcagata gtaaaacttt actgtataat
     1021 gagagcaagc caacattcac taatgtctca tctggtggtg ttgtccatgg gaaaatactt
     1081 cccggggata agccttattc ctgtaatgtc tgtggaaaga aatttagaaa atacccatca
     1141 ctcctggcac accgaaataa ccatgccaaa gacaaatctt atgaatgtga agaatgtggt
     1201 aaagaattta agcatctctc atccctcatt gcacatcaga gaatgcacac cggagaaaaa
     1261 ccatacgaat gccaccagtg tgggaaagcc ttcagtcagc gtgcacacct gacgatccac
     1321 cagagaattc atactggaga aaagccctac aagtgtaacg actgtgggaa agacttcagt
     1381 cagcgtgcac acctcactat ccatcagagg acacacactg gggagaaacc atataaatgt
     1441 ttggagtgca gtaaaacctt tagccatagt tcatccctga ttaatcatca gagagttcat
     1501 actggagaaa aaccgtatat atgcaatgag tgtgggaaga ctttcagtca gagtacgcac
     1561 ctcctccaac atcaaaaaat tcacactggg aaaaagccgt ataagtgcaa tgagtgttgg
     1621 aaagtgttca gccagagcac ttaccttatt cgccatcagc gaatccattc tggagagaag
     1681 tgttacaaat gcactgaatg tgggaaggcc ttcgcccact cctcaaccct catccaacat
     1741 cagaccactc acactggaga gaaatcctat atctgcaacg tgtgtgggaa agccttcagc
     1801 caaagcgcta accttaccca gcatcataga acacacactg gagagaagcc gtacaaatgt
     1861 agcgtgtgtg ggaaagcctt cagccagagt gtgcacctca ctcagcacca gaggattcac
     1921 aatggagaaa agcccttcaa atgtaatacc tgcgggaaag catacagaca aggtgccaat
     1981 ctgacccagc atcaacgagt ccacactgga gagaagccct acaagtgtca ccactgtggg
     2041 aaagccttta tctactcctc atcacttaat caacatcgaa gaactcatac tggagagaga
     2101 ccctataagt gcactcactg taacaaagat tttagccaga gaacatgcct tattcaacac
     2161 cagaggattc acacaggaga aaggccctat ggatgccgta tatgtgggaa aagcttcacc
     2221 cagagtacaa atcttattca gcaccaacgg gttcatatgg gcgccagaca tcgcaatgga
     2281 cagatatgac ttagtttatg tttaaaactt gattgcttaa atttcattgt gtgctgagtc
     2341 aaaataccca aaagaaatct gaagaagtgc aatatgcttg atactacagg atcagaaagt
     2401 accagaatta gtaaaattgc tctcgtccac ttaggtttag tgtgagattt aaagctccag
     2461 aacttgaatt cattccacaa agaaatacta ggaaaggaca atttgtaacc tgtgattctt
     2521 caactcttag tatttttcaa gtatgtttta ttgaggcctt aggagtatga cttggtcttt
     2581 caagtgatct cacactagag agtaatcctg acataggaaa gagggtagat gcttcaaggc
     2641 ctttgcttca tcctggcttt gaagcctcaa aatgagtaaa ctgtcccaat ttttgttccc
     2701 tcttttccca ttgcaacttc catgagaagc agtaaagctt gaggaaaaga aagacctgaa
     2761 aagctcttaa aagatttccg tgtgaccact gcagtctgat aagatagagg atcagtatat
     2821 ccaaaacact agacgtgtac aaactcacgc agacacaggt taaacacccc agcctcaagt
     2881 catctttagt acaacttcat tttcacatcc agtgtcacct cgaaggaaga aggacaggca
     2941 tggtgttccc ttttgtccca cctgacttaa gttgacaagt ttcccatggt tcttactgta
     3001 ccaagctatt tcttccattg aaacacactt cttgagagcc cactgtgctc agaacacaga
     3061 cttctttttt attatcgttt atagtttttt aatgtaggag tctgcatatc agatcccttt
     3121 atagatatgg tcacgagcca ctatgttggt gctgggaatt gaactcagga cctctagaaa
     3181 agcagccagt actcttaacc actgagccac ctcatcagcc tgacacagcc tccttgactg
     3241 aaccatttca tttaacaaag atctttaaag agaaggtaag gacacgcttt aactattttg
     3301 ccatggaaca gtgtaaccca cctaaatggg ttggcaaatg ctacggtaag gccaggtgta
     3361 gagggcagtg agcatgggct gcacaaacaa tttgagaatg aatgagggat gcaaaggaga
     3421 cctgagccag tgcagaggtg gcgagggaaa gccagggccg ggaggaggga ggaggggagc
     3481 acacagatag ctcatgtgac atgaaatata attgtaccca ctttatccaa gaaacaactg
     3541 tggtgaaaaa cagaaaatta gactgtttat aagaagctaa aaagaaaagt attttcagga
     3601 ataattagaa acctggtact ccatacatgg aagtaaaatt taaaaattac acttaacatg
     3661 ttaggaaagt gtttcattgg aaaaagcctt ggtgaaaaaa tgatcattaa tcaggaatga
     3721 aacagtaact aagttcgtgg gtcataaaca gcataaaagg aagacagaca ggaaccaatt
     3781 tttttaattg ctggggtttt ttcgcaaaca gtaattacaa agtgtaatta cagtttaatt
     3841 actttactat tgtatttact acccatagtg ctgtgctctc agaatattta gctgagcttc
     3901 atcttgcctg ttcttgttcc tccagtgcct tgcataagat caatatatgt tggttgaatt
     3961 gacagcgaat tctatacatt agagtctcgt agttaaggta gcaacacagg catggagaga
     4021 acatgggtgg gactgaaggt aacctgtgtg tccatgtatc acgtctaaca agcactgttt
     4081 actgtgaaac gacagctcaa gaaggagact gagaggcggt ggacgctgtt gcccgaggaa
     4141 agctccctga gctacaggag aggaaacgag ttctggtacc atagataccc aaacaccaca
     4201 acgggctgaa gaaaaggcct catctatcct tgtgggagtg ttttcttaag gaaattgtca
     4261 ctttctcctt cctgatatta gttatcttga cttcgtagtg ttcacaaata ctggttacaa
     4321 acatactcag attaggctca ctccacagtt ttgttaagaa taacaaacgt gtttgctaga
     4381 tgacttgata ttgcttcatg ccttgataac taacacttct ttccgctggg atgaatgtgg
     4441 tttggtacag gccagagggt ggtactttgt ttcctacctg tgtgcatttt atgtaaataa
     4501 tgcatttata aagtcttcca ctgtacacag agtcaagtac ggctcctaaa aaaaaataga
     4561 ataacaatgc agaatcctgt ctccatgcct ttccccattt caaagtcgtc tggtctacga
     4621 gcgagtcacg ggtctttagc aaatatttcc tacagctttt tctaggagca ttgctaacta
     4681 tgtgagtgtt taaagtcatc agatcaacgg tatgcgccac ctgtattcta aagttaatgt
     4741 ttgcaatatt gaaaagtaac ctgagacacc tcactctaaa acatctcata aaaatgccat
     4801 tcccctacca tagtgcctca aagaaaatgg gcagtccttc ctaacatcta attactagtc
     4861 catttcctga tctccctgtt gagccaatca gtgtctgcgt gtcctctgtt tggtgggctt
     4921 cctgtgccta gaacagaccc tcccattttt ctgttgtttt cagggtgtgc tggtcgtcac
     4981 attcaggagt gagctgagag ttcatacatg gcttgcatgt gctgaagtaa atgtcctgaa
     5041 gcttctagga aatcgaagtt gaggccaaag gctcaagtta aacatcctta accatggcat
     5101 ttcacggttg catttcctcc tgcatcccag aactcagtca ggccaacagg ctgctgctga
     5161 cgtgacattt gactgttgaa gtggtgacca ccagattgtc ccagtgcaat tcctcctgtt
     5221 gtggttgtct gtctgtggac tgacacttgg gcagtgtggc tgacttcttt acccactgtt
     5281 ttgtgtctag tcacattgtt acctgacagc ctcttcatta aagcctacaa aacaagtga
//
