LOCUS       NM_001419514            5087 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus zinc finger protein 280B (Zfp280b), mRNA.
ACCESSION   NM_001419514 NM_001106384 XM_008773852
VERSION     NM_001419514.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 5087)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000020.1.
            
            On or before Apr 6, 2023 this sequence version replaced
            NM_001106384.1, XM_008773852.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643299.66383.1,
                                           SRR26643293.82017.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN16676806, SAMN16676809
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-137               JAXUCZ010000020.1  12641247-12641383   c
            138-198             JAXUCZ010000020.1  12640262-12640322   c
            199-5087            JAXUCZ010000020.1  12626550-12631438   c
FEATURES             Location/Qualifiers
     source          1..5087
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="20"
                     /map="20p12"
     gene            1..5087
                     /gene="Zfp280b"
                     /gene_synonym="RGD1565460; Znf280b"
                     /note="zinc finger protein 280B"
                     /db_xref="GeneID:294343"
                     /db_xref="RGD:1565460"
     exon            1..137
                     /gene="Zfp280b"
                     /gene_synonym="RGD1565460; Znf280b"
                     /inference="alignment:Splign:2.1.0"
     exon            138..198
                     /gene="Zfp280b"
                     /gene_synonym="RGD1565460; Znf280b"
                     /inference="alignment:Splign:2.1.0"
     exon            199..5087
                     /gene="Zfp280b"
                     /gene_synonym="RGD1565460; Znf280b"
                     /inference="alignment:Splign:2.1.0"
     CDS             254..1852
                     /gene="Zfp280b"
                     /gene_synonym="RGD1565460; Znf280b"
                     /codon_start=1
                     /product="zinc finger protein 280B"
                     /protein_id="NP_001406443.1"
                     /db_xref="GeneID:294343"
                     /db_xref="RGD:1565460"
                     /translation="MEQPYVVDDDESDPEPQPRSQEPIQVLDEDDSEDAELIFVGVEN
                     VKEDAELIFVGVTSTSQPANSNILNRVTPGSRLKRKHDRLRETTTQRLQPSPPAAPTS
                     EAAIVLPVSPAESRSTDSPIIIEPLSESDYKSNSQVVPSSSSKCCSPLATLSSSESGP
                     ARAACSGGGLNESLYVSKCHFSINPQRPERSIEIVEELSSALPPSGPFHTSNAQQRTP
                     SLEAPKSLNLFVNGAPLSGDPVHPRQDSGSVDTDFSSLASPETFDPKKGSLTLLLSDF
                     YYGQYKGEGKPEQKTHTTFKCPSCSKALKNVKFMNHTKHHLELERQGSDEAWESHTTC
                     LRCHRLFASPFQLECHIDRVHTAPDPCVVCKICELSFETEQVLLEHMKDNHKPGEMPY
                     VCQVCKYRSSVFADVETHFTKCHVNTKNLLCPFCLKIFRTGMPYMCHCRGHWERNGHQ
                     CSKCRLQFLTFKEKMEHKTQCHQMFRKPKQLEGLPPETKVVIQVSVKPVEAESVEVAS
                     ITVSTTDWEPSCPRSQGRLSQKPH"
ORIGIN      
        1 gtcgccgtgg gctagtgcgc gccggccggg gctttgccgt tggagcggca gggccccgga
       61 ggtcgtagtg ctgggcttcc cgcgcagcgc ctcgcgggcc ggggcgtccg gggaggctcg
      121 ggtacgccag cggggaggga tgtgactttc agctcttgga ctctctggag ttgttaaaag
      181 ttaccgtgta catctacggt ggcagtgtgt gtggagcaag tgctggccac actcgtcggg
      241 aagcacagta gaaatggagc agccgtacgt ggtggacgat gacgagtcag acccagaacc
      301 acagccacgc tcccaagaac ccatccaagt cctcgatgag gacgactcgg aggacgccga
      361 gctgatcttt gtgggggtgg agaatgtaaa ggaggacgcc gagctcatct ttgtcggcgt
      421 gacttcaacc tcacagccag ccaactcgaa catcttgaac agagtcaccc cgggttcacg
      481 gttaaaaaga aagcatgacc gacttagaga gaccactact caaagactgc agccctcacc
      541 tccggccgcc cccacatcag aggcagcgat cgtcttgccg gtgtctccag cggagtcaag
      601 atcaacagac agtcctatca ttatcgagcc tttgtccgag tctgattata aaagtaattc
      661 acaagttgtg cctagtagct cttcaaagtg ctgttcacct ctggctacgc tctccagctc
      721 agagagtggc ccagcaaggg cagcgtgctc aggaggaggt ttgaatgaaa gtctgtatgt
      781 atcgaagtgc catttttcca taaacccaca gaggcctgaa cgtagcatcg agattgtaga
      841 agagctctct tcagccttgc ccccttcggg tcctttccat acctcgaatg cgcagcagag
      901 gacgccttcc cttgaggctc ccaaatcact gaaccttttt gtgaacgggg cgcctctgtc
      961 aggggaccct gtccaccctc gccaggacag tgggtcggtg gacacagact tctcgagtct
     1021 agcaagtcca gagacttttg atcccaagaa gggaagtttg actctgttgc ttagtgactt
     1081 ttattacgga cagtataagg gggaaggcaa gccggaacag aagacccaca caacctttaa
     1141 atgccccagc tgctcgaaag cgctaaaaaa tgtgaagttt atgaaccaca ccaaacatca
     1201 cctggagctg gagaggcagg ggagtgacga ggcctgggag agccacacca cctgtctgcg
     1261 ctgccaccgg ctgtttgcgt ccccgttcca gctggagtgc cacatcgacc gtgtgcacac
     1321 agcgccagac ccttgtgtgg tctgcaaaat ctgtgagttg tcatttgaaa cagagcaggt
     1381 ccttttagag cacatgaagg acaaccacaa gcccggggag atgccctacg tgtgccaggt
     1441 ctgcaagtac aggtcgtcgg tctttgctga cgtggagaca cattttacca agtgccacgt
     1501 gaacacgaag aacctgctgt gtcccttctg tctgaagatc ttcagaacgg ggatgccgta
     1561 catgtgccac tgccggggcc actgggaacg caacggccac cagtgctcca agtgccggct
     1621 gcagtttcta acctttaagg agaaaatgga gcacaagacc cagtgccacc agatgttcag
     1681 gaagcccaag cagctggaag ggctgcctcc cgagacgaag gtggtgattc aggtgtcagt
     1741 gaagcctgtg gaggcggagt ctgtggaagt tgcgtcaatc accgtgagca caaccgactg
     1801 ggagccatct tgccccagat ctcaaggcag actttcccag aagccccatt aacgctaacc
     1861 gggtcagaac acagaccctt cagagagaga agactacaga cccgcacgtc ggctagtcgc
     1921 tggctggccc ccaggacgat gcactgatga acagatctgt ttatctttaa ttttgcgata
     1981 acacagggtt tgcttgttta gtgtttgagg gtttctcttg ttctcactta gtgctggcgc
     2041 tcgaccacgg cttcacaaag aacaagcaag tgctctccca ccccattccg cagctacagc
     2101 gttttccgag tgagcagcga gtgctactta aaatacatct gggtttcacc ttaagtgtct
     2161 ggcttcacac caggaagatg tctgtgtctg tgtcctcgtg agtggaaggc aggctaaacc
     2221 tatttattag tatttcatgt aaccctcagt ttgagagctc tttttggagt ttggggggct
     2281 cacaaggcct cacctctccc tgaagatcct tacgcagtct gcgcttgctg taggagggag
     2341 agagaccaat tcttcttttt tgagagccat cttaagtggt atagcatggg caagtggaca
     2401 gccacacgtc cctttcagtc ttgaagccaa agaaggaatc ctgcctgaat gtctttacct
     2461 aaaagagtgt ccgaggaggc cgagccattc tgtagaaggc ccatgtttgt gaaaggccct
     2521 cgcaaacatt aaaagcacag ctgtgcgttc tcagcgccac gggaagcagc agcggcgggt
     2581 agaagactgg gagggagccg acgaccatga ccacgggctc gttttgcttg atgcttaggg
     2641 tagctagagt tatccactct ctgttcggcc ttggctagct gtgattgaag aactggccat
     2701 gccctcacgg ccacagcagt aaagcaagtt gtcctttccc aaggaaagaa gtcgtggcat
     2761 ttgtagtttg aagtgtgttg attgaacctt aggtataact gaaaaggttt gggaaaatgg
     2821 catctgtcca gtttatggcc tgggctgaac ttagttgtac tcaagctgta ataggaactt
     2881 gcccaatgat attggacata gcacaaacag tagaccaggg tgactagaac ttaaccctct
     2941 gtggggcctt tgttcttcaa tccatgtgtg ggacggagtg ggtgaagctt gccatttggt
     3001 gccctggtgc tttttttccc ccttggtgct agggaataaa cccagggcct tacatgtacc
     3061 acgtaagggc tctgccactg aactaactcc ctagtcacca tttgtgtctt gtctcatagg
     3121 tggctagaat gtctgtgtaa tttccctttg ttgggtgtat aactcccgag ttgatcacac
     3181 taatattgct tgggtcttac ttgaagcact tttgtgtgcg agattatgtc ctaaatgaag
     3241 acttgccttt tcccatgtga tatagtgact cagctggtca ctagtctatg gaggaacaac
     3301 ttttcgtaga actgtagagc atcctctgag gattggtctt caccttcagt agcattagct
     3361 ctttctgtaa atctccagag ctgtccttga gcctggccca gtgccacctg ttgtccctcc
     3421 acctccagcc caggtgacca gctgctgctg cttatccctt aaggagtctg ggtgcatgct
     3481 ggctgtagac actggtctca aaaactctct gagtttccct atcctttctt taaaggtacc
     3541 ttatcttgct gggtgtggta gcacacactg gtaattaatt agagctcttg ggagaccgga
     3601 agatctgcag ttcacactca gcctgagctc ttcagtgagt tccaaggtac ccagcaagac
     3661 cctgtccctt aacaacaaaa gagtcagtgg ggacaggttc cttagatgtc cctgtcccat
     3721 ttttccttcc tcggtttagt gaagtttccc tagattccat gaaaaaatga gcagaggttt
     3781 tcgccaggtc atggccattg atcgactgtg atctgtctcc ttactatttt gatgggcctt
     3841 ttcagtgatt tcttttttcc tttttttttt tttttttttt ttttttggcc atgtcacgct
     3901 cgctctcacg ctctgttttc cctgtacctt tttttttttt cttttctttt cttttttttt
     3961 ttttcttttt ttcggagctg gggaccgagt acctttcctt tagatgtagg aggtgtattt
     4021 gttccccttg ttctggagga aaatcccatc atctatgaaa tgagtctgca gacttatgta
     4081 ctgtctgtgg taaaagtgag aaccctctta gacctgtgtt gtcttcagcc caatagctgt
     4141 ggttttctgt ttcactaaag caggctccga aggagtacag actgttgttt actgctaagg
     4201 gaggcccagg gctctggctc ctgcctacct gcttctcctg tcccctgccg ctgtccaaca
     4261 gactcccccg gtactgcact gttgtgactg acctggccgt tcctcagtaa attcccgatc
     4321 cctcctgtgc agaagctgcg ggctgttccc ttgtcacagt gctttcccta agcctgcatg
     4381 gctgctacct cacttgtggt tattaagctt atcaagattt ttagagtgac tcgaaatgtc
     4441 ccctgcttct gaagccctat gtacccttct cttggaaggc aattacctct ccctgcagct
     4501 ttcttctcct ctctgcaacc tagccaagtt tcctagtcgc agaacttgag gaagaaatcg
     4561 ttagcaagag ctttggttcg tcttagaagt gagctagctt aagtccattt ttgtgcctct
     4621 aacacaaaga agtagagtga gctgagtctc tggaagcttt ctgttttata ttgacagctc
     4681 tatctatttt taaagcaatg tcactttgtt ttgtttacac atgaattaaa tatttgtcaa
     4741 gattactatt ttgttactct gtgaagttgg ttgcttgttt taccaaataa aagttattat
     4801 tttaatgttg ccaaagttat ttataagaac tagtaattag aataaagcat tttgtggaaa
     4861 ccttttgtgt ctttttgttt ttactttgag caccatgtat tttagtttaa tttttgtttt
     4921 gtgtcttctg cagttgagtt tattattttt ctttttttct tggatatttt atatatttac
     4981 attttaaatg ctatcccctt tcctccctga ctttattttt accacctcat tggttataac
     5041 ttgtaagtga tatgttcaat aaagctaata gtcttcttta attttaa
//
