LOCUS       XM_006228205            2753 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 28 (Zfp28),
            transcript variant X1, mRNA.
ACCESSION   XM_006228205
VERSION     XM_006228205.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006228205.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006228205.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2753
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2753
                     /gene="Zfp28"
                     /note="zinc finger protein 28; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     ESTs, 101 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 81 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:102548693"
                     /db_xref="RGD:7679103"
     CDS             40..2595
                     /gene="Zfp28"
                     /codon_start=1
                     /product="zinc finger protein 28 homolog isoform X1"
                     /protein_id="XP_006228267.1"
                     /db_xref="GeneID:102548693"
                     /db_xref="RGD:7679103"
                     /translation="MRGVASMGSCEPRALLGRGVLCTKPWPGGGPAGTTAARGRPARG
                     RPRSRNSLASQGRQGAVTSGPAHKALLSRDTNFLQEINRKEEAAPTGTKLKAKSQGLV
                     TFGDVAVVFSQEEWEWLTSEQRSLYWKVMLDNYRNLASLGLCASKPDMIALLEQGTDP
                     WMMGRGRCTDLKAVQETKELPPKDLSEETSQAVLRRRLLHRRPMCYMSGASWGGDAVF
                     KAQRGSKTNSDMARDSPPELVSAQKNFRKNATWENCDDLGLLGVSETHFISLLGQEKE
                     PSGTETASTNLFSGQQSVQEAQDSLPRQDSHAGRVTGSTWSTERACSAFRGDRDSECV
                     FERNGQDTAFESQNRAFSEGRDGVCLNSGRWFHLNSSEERSHNCDSGKTSLPNPTVIK
                     ETRIYSGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPYKCNECGKAFSDGSSFARHQ
                     RCHTGKKPYECLECGKAFIQNTSLVRHWRYYHTGEKPFDCIDCGKAFSDHIGLNQHRR
                     IHTGEKPYTCDVCHKSFRYGSSLTVHQRIHTGEKPYECEICRKAFSHHASLTQHQRVH
                     SGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPFECGDCGKSFSISSQLATHQRIHTG
                     EKPYECKVCNKAFTQKAHLAQHQKTHTGEKPYECKECGKAFSQTTHLIQHQRVHTGEK
                     PYKCLECGKAFGDNSSCTQHQRLHTGQRPYECVECGKAFKTKSSLICHRRCHTGEKPY
                     ECSACGKAFSHRQSLSVHQRIHSGKKPYECKECRKTFIQIGHLNQHKRVHAGERTYNC
                     RKGRRAFRQIARFAHHQRIHSGELPAHPTLPSTSNPVDLFSKFVWNPSSLSSS"
ORIGIN      
        1 ctgcagcctg gcaaggagag cgtgcgcccc tcgcgtgaca tgcggggagt ggccagtatg
       61 gggtcctgcg aacctcgggc cctcctgggg cgcggcgtgc tctgcacaaa gccctggcct
      121 ggtggaggtc cggcggggac tacagctgct cgtgggcgtc ccgcccgggg aaggccgcgc
      181 tccaggaaca gcctggcctc ccagggcagg caaggagcag tgacctcggg gcctgcgcac
      241 aaagctctgc tttccagaga taccaacttc ctccaggaga taaaccgcaa agaggaagct
      301 gcccctacag ggactaaact taaagccaag tctcagggct tggtgacatt tggggatgtg
      361 gctgtagttt tctcccagga ggagtgggaa tggctcacct ctgagcagag gagtctgtac
      421 tggaaggtga tgctggacaa ctacaggaac ctggcatccc tgggactttg tgcttctaaa
      481 ccagatatga ttgccttgct ggaacaaggt acggacccct ggatgatggg aagaggccgg
      541 tgcacagact tgaaggctgt gcaggagacc aaggagctcc ctccaaagga cttaagtgaa
      601 gaaacatccc aggcagtgct aagaagacgg ctcctgcacc gtagacccat gtgctacatg
      661 tcaggggcat cctggggtgg agatgctgtg ttcaaggcac agaggggctc aaagaccaac
      721 tcggatatgg ctagagatag tcctccagag cttgtgtcag ctcagaagaa tttccgtaag
      781 aatgcgacat gggagaactg tgatgacctg gggctcttag gtgtttctga aacgcatttt
      841 atctctttat tggggcaaga gaaggagccc tcaggtacag agacagctag caccaacttg
      901 ttctcaggcc agcagtctgt acaggaagcc caggattcac ttccaaggca ggactcacat
      961 gctggaaggg taacaggcag cacttggagc actgaacgtg cgtgctccgc cttcagagga
     1021 gatcgggatt ctgagtgtgt gtttgaaagg aatgggcagg acacagcatt tgagagccag
     1081 aacagagcct tctcagaggg gagagatggc gtgtgtctca actctggaag atggtttcat
     1141 ttgaacagtt cggaagagag aagtcataat tgtgactcag gtaaaacttc cctcccaaat
     1201 ccaacagtca taaaagaaac cagaatctat tcaggaaaaa aacttttcaa atgtaatgaa
     1261 tgtaagaaaa ctttcaccca gagctcatcc cttactgttc accagagaat ccatactgga
     1321 gagaagccct ataaatgcaa tgagtgtggg aaggccttca gtgatggttc ctccttcgca
     1381 cgacaccaga ggtgccatac aggcaagaag ccgtatgagt gcctggagtg tggcaaagct
     1441 ttcattcaga acacctcgct agtccgtcac tggaggtact atcacactgg ggagaaaccc
     1501 ttcgactgca tcgactgtgg gaaagccttc agtgaccaca taggactcaa tcaacacagg
     1561 cggattcaca ccggagaaaa gccgtacacg tgtgacgtgt gccacaagtc ctttaggtat
     1621 ggctcatccc tcactgtgca ccaaaggatt catactggag agaaaccgta cgagtgtgag
     1681 atttgcagaa aagccttcag ccaccacgcg tccctcactc agcatcagag agtgcattct
     1741 ggagaaaagc cttttaaatg taaagagtgt gggaaagcgt ttaggcagaa tatacatctt
     1801 gctagtcatt tgaggatcca taccggggag aagccctttg agtgtgggga ttgtgggaag
     1861 tctttcagca tcagttctca gcttgccacg catcagagaa ttcatacagg agagaagcct
     1921 tatgaatgta aggtttgtaa taaagcattt actcagaagg ctcaccttgc acaacatcag
     1981 aagactcata ccggggagaa gccatacgag tgtaaggaat gtggcaaggc cttcagccag
     2041 accactcacc tcattcaaca tcagagggtt cataccggag agaagcccta taaatgccta
     2101 gaatgtggga aggcgtttgg tgacaactca tcttgtactc aacatcagag acttcacact
     2161 ggccagagac cttatgagtg tgtggaatgt gggaaggcat tcaagaccaa gtcgtccctt
     2221 atctgtcatc gtagatgtca cacaggagag aaaccttacg agtgcagtgc atgtggcaaa
     2281 gcctttagcc atcgtcagtc ccttagtgta catcagagaa ttcattctgg gaagaagccg
     2341 tatgaatgta aggagtgtag gaaaaccttc attcagattg gacacctcaa ccaacacaag
     2401 agagtccatg ccggagagag aacgtataac tgcaggaagg gcaggagggc cttcaggcag
     2461 attgcacgtt ttgcccacca tcagcggatt cattctggag agttaccagc tcaccctact
     2521 ttgccttcca catcgaatcc tgtggatctc ttctccaagt tcgtctggaa tccatcctca
     2581 ctgtcatcgt catagtctta aaacctcact atttccacca caacgcatct cactgcccct
     2641 ttgttcattt ttgttgctta taagcccttt atgttacaac catgttgggt tatttttgga
     2701 gtgtaaatgt aattaatttg atcacataaa acttatattc actggttaaa gcc
//
