LOCUS       NM_001399663            2090 bp    mRNA    linear   ROD 29-MAR-2024
DEFINITION  Rattus norvegicus zinc finger protein 277 (Zfp277), mRNA.
ACCESSION   NM_001399663 XM_216701
VERSION     NM_001399663.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2090)
  AUTHORS   Negishi,M., Saraya,A., Mochizuki,S., Helin,K., Koseki,H. and
            Iwama,A.
  TITLE     A novel zinc finger protein Zfp277 mediates transcriptional
            repression of the Ink4a/arf locus through polycomb repressive
            complex 1
  JOURNAL   PLoS One 5 (8), e12373 (2010)
   PUBMED   20808772
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000006.1.
            
            On Jan 12, 2022 this sequence version replaced XM_216701.10.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ214704.1, SRR26643288.26545.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760389,
                                           SAMEA5760400 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-119               JAXUCZ010000006.1  63239713-63239831   c
            120-321             JAXUCZ010000006.1  63168721-63168922   c
            322-410             JAXUCZ010000006.1  63158381-63158469   c
            411-493             JAXUCZ010000006.1  63157757-63157839   c
            494-585             JAXUCZ010000006.1  63131045-63131136   c
            586-696             JAXUCZ010000006.1  63125549-63125659   c
            697-829             JAXUCZ010000006.1  63124724-63124856   c
            830-897             JAXUCZ010000006.1  63117723-63117790   c
            898-994             JAXUCZ010000006.1  63115992-63116088   c
            995-1037            JAXUCZ010000006.1  63114025-63114067   c
            1038-1212           JAXUCZ010000006.1  63112593-63112767   c
            1213-2090           JAXUCZ010000006.1  63110609-63111486   c
FEATURES             Location/Qualifiers
     source          1..2090
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q21"
     gene            1..2090
                     /gene="Zfp277"
                     /note="zinc finger protein 277"
                     /db_xref="GeneID:298977"
                     /db_xref="RGD:1583856"
     exon            1..119
                     /gene="Zfp277"
                     /inference="alignment:Splign:2.1.0"
     CDS             26..1399
                     /gene="Zfp277"
                     /codon_start=1
                     /product="zinc finger protein 277"
                     /protein_id="NP_001386592.1"
                     /db_xref="GeneID:298977"
                     /db_xref="RGD:1583856"
                     /translation="MAAPEAQGLGVDPREDRVRGVRGGIGHIDHEDSKDWILESLSLP
                     ERPGGTAALEGPPSVPCIFCEEHFPMTEQDKLLKHMIIEHKIVIADVKLVADFQRYIL
                     YWRKRFTEQPITDFCSVIRINSTAPFEEQDNYFLLCDVLPEDRILREELQKQKLKEIL
                     DQQQRERNDTNFHGVCMFCNEEFRGNRSVLLNHMAREHAFNIGLPDNIVNCTEFLCTL
                     QKKLDNLQCLYCEKTFRDKNTLKDHMRKKQHRRINPKNREYDRFYVINYLELGKSWEE
                     VQLEDDRELLDLQEDDWSDWQEYPVSAVCLFCEKQEETIDKLYVHMKDTHEFDLLRIK
                     SELGLNFYQQVKLVNFIRRQVHQCKCYSCQAKFKSKAELRTHMENAKHTSLLPDSKTW
                     DQLEYYFPTYENDTLLCTLSDSESDLTAQEQTENVPIISEDTSRLCALRQSSVLNQLL
                     LQECLEN"
     exon            120..321
                     /gene="Zfp277"
                     /inference="alignment:Splign:2.1.0"
     exon            322..410
                     /gene="Zfp277"
                     /inference="alignment:Splign:2.1.0"
     exon            411..493
                     /gene="Zfp277"
                     /inference="alignment:Splign:2.1.0"
     exon            494..585
                     /gene="Zfp277"
                     /inference="alignment:Splign:2.1.0"
     exon            586..696
                     /gene="Zfp277"
                     /inference="alignment:Splign:2.1.0"
     exon            697..829
                     /gene="Zfp277"
                     /inference="alignment:Splign:2.1.0"
     exon            830..897
                     /gene="Zfp277"
                     /inference="alignment:Splign:2.1.0"
     exon            898..994
                     /gene="Zfp277"
                     /inference="alignment:Splign:2.1.0"
     exon            995..1037
                     /gene="Zfp277"
                     /inference="alignment:Splign:2.1.0"
     exon            1038..1212
                     /gene="Zfp277"
                     /inference="alignment:Splign:2.1.0"
     exon            1213..2090
                     /gene="Zfp277"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ccgccccttt caactggttc aggtaatggc tgctccagag gcccaggggc ttggtgtgga
       61 cccccgggaa gaccgggtcc gcggggtccg cggcggaatc gggcacatcg atcatgaaga
      121 cagtaaagac tggatcctgg agtcgctgtc cctgccagag aggccaggtg gcaccgccgc
      181 tttagaaggg cctccatctg tgccttgtat tttctgtgaa gaacattttc ccatgactga
      241 acaagacaaa cttttgaagc acatgattat tgagcataag attgtcatag ctgatgtgaa
      301 gctcgttgca gatttccaaa ggtacatttt atattggagg aaaaggttca ctgaacagcc
      361 catcaccgac ttttgcagcg tgataagaat caactccaca gcaccatttg aagaacaaga
      421 caactatttt ttgttgtgtg atgtattacc agaagataga atcctcagag aagagcttca
      481 aaaacagaaa ctgaaagaaa ttctggatca gcaacagcga gagcgaaatg atacaaactt
      541 tcatggtgtg tgcatgtttt gcaatgagga atttcgcgga aacagatctg ttctgttgaa
      601 ccacatggcc agagagcatg ctttcaacat tggtttgcca gacaacattg taaactgcac
      661 tgaattccta tgcacattgc agaagaaatt ggacaattta cagtgtttgt actgcgagaa
      721 gaccttcaga gacaaaaaca cacttaaaga tcacatgaga aaaaagcagc atcgtaggat
      781 caatccaaaa aaccgagaat atgaccgatt ctatgtcatc aattacttgg aactcgggaa
      841 gtcatgggaa gaggtgcagt tggaagacga ccgtgagctg ctggaccttc aggaagatga
      901 ctggtctgat tggcaggagt accctgtctc tgctgtctgc ctattttgtg aaaagcaaga
      961 ggagacaata gataaattgt atgtgcacat gaaggacaca cacgagtttg atctcctcag
     1021 aataaagtca gaactcggat taaatttcta tcagcaagtg aagctggtca acttcatccg
     1081 aaggcaggtt caccagtgca agtgctacag ttgccaggca aagttcaagt ccaaggcaga
     1141 gctaaggact cacatggaga acgctaaaca cacctcactg cttcctgaca gcaagacgtg
     1201 ggatcaactg gagtattatt ttcccaccta tgagaatgac actctcctgt gtacgctgtc
     1261 tgacagtgaa agtgacctga cagctcaaga gcaaactgaa aatgttccca tcatcagtga
     1321 agatacgtcc agactgtgtg ccttaagaca gagcagtgtt ctcaaccaat tgctgctcca
     1381 ggaatgcctg gaaaactagc agaggctgct gcgggcgcag tgcacaggct gctgcgggcg
     1441 cagtgttgca tggtttcctc ctggaagaca cagacagaac aagagttcag atttgatcat
     1501 cgacacagca ttattcatta ctggaatcat ggttgttgtt aatgaatttt tttttcaaga
     1561 aataagaaaa ataaaacgtt tttatatttg gactgagaaa ttttattata ttgttatctt
     1621 aagtgatttt atttcataaa ctcataatta tctacaatat ggagaacgta aaagccacaa
     1681 acattagaat ggatgaacct gattttaacc ccattatctt agtccccttc ccatgagcct
     1741 gtcacccatt aagtcacaga attcaatgtg atttctgtac taaattgaga gcctgtgaat
     1801 tattaaaaca ggacccacca aagcaaaaaa aaaaaaaatt gccaaaggtc tggataattc
     1861 acaaattaga cttttttaaa aagtcaaacc tgattgtatt acagtgttat tgttttcctg
     1921 ttccaaaccc catagaaatg ggcacaggat aattaaactc actccaccaa aatatatgtg
     1981 cacctatgta tgcactttcc ctgctatata ttataatagc aatagtaaca gagataagtc
     2041 tgtgaacata actgtagcgg cattataaca cttaataaag ttaaaaggaa
//
