LOCUS       XM_017590507            3734 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 27 (Zfp27),
            transcript variant X3, mRNA.
ACCESSION   XM_017590507
VERSION     XM_017590507.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_017590507.3.
            
            On Jan 21, 2021 this sequence version replaced XM_017590507.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3734
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3734
                     /gene="Zfp27"
                     /note="zinc finger protein 27; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     ESTs, 67 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 17 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:100362022"
                     /db_xref="RGD:2318958"
     CDS             401..2914
                     /gene="Zfp27"
                     /codon_start=1
                     /product="zinc finger protein 27 isoform X1"
                     /protein_id="XP_017445996.1"
                     /db_xref="GeneID:100362022"
                     /db_xref="RGD:2318958"
                     /translation="MPTDWTSTLEATSLAPEDPGSSSEGLVSFMDVTIDFSREEWQHL
                     DPAQRSLYRDVMQETYSHLRSVEELQQTGDHYQQIEPKSASDMVFIKKTVDAESRHEY
                     AGVRTVIHVNSYTVPSPTRLRYRDPLASDPEHNLNLQTRHESNEPKRGQKITEYGKIS
                     SYSNTNHTLTGEKLQDHGQCERALSYEQVPCRYQKSYECAEFGKTLTQKPQRTVHVKS
                     TRDRLYVCLECGKACSQKSEFLTHQKTHTREKRYPCGNCGKSFFQASSLFRHQRIHTG
                     EKLYECGHCGKGFSYNSDLRTHQKIHTGERHYSCADCGKAFAQKSTLKIHQKIHTGDR
                     AYICIECGQAFIQKTHLVSHRRIHTGEKPHQCDSCGKSFVSKSQLQVHQRIHARVRPC
                     VTPDHGKTFSISPSFTRKKVPVREKSSACTECGKAFTYRSELIIHQRTHTGEKPYQCG
                     DCGKAFTQKSALTVHRRIHTGEKSYACVKCGLAFVQKAHLVAHQVIHTGEKPYTCGHC
                     GKLFTSKSQLHVHKRIHTGEKPYVCSKCGKAFANRSNLITHQRIHTGEKSYVCSRCGK
                     AFTQRSDLVTHQRIHTGEKPYGCSICGKAFTQKSHLSIHQTIHTGERQYKCLDCGKAF
                     NQKSILIVHQKIHTGEKPYVCTECGRAFIRKSNFITHQRIHTGEKPYRCNDCGKPFTS
                     KSQLLVHQPIHTGQKPHVCAECGKTFSGRSNLSKHQKTHTGEKPYMCSECGKTFRQKS
                     ELITHHRIHTGEKPYDCSGCGKSFTKKSQLQVHQRIHTGERPYTCAECGKAFTDRSNM
                     NKHQTIHTREKPHKCVVCGEGFVQKSALSAHQSLHTQAV"
ORIGIN      
        1 taggtttaaa gtataacaga actcatgccc tcaaagctag aggaacctcc tcctatagga
       61 tgatgcacag acaagggcta cagtgcttgg atttacgttc tttatcccat tctgtgtaat
      121 ctggctggat agctattcct ctgctgtacg gaatgcttaa gtttcaaaga tggtggccta
      181 cgcggcatct ccgggcgcgg ccatagcctc ttaaggaatg gtatataaag gttctgcaaa
      241 ctctttaggc acctagtggg ttgttggagt cctcctgtgt cgcagctcca gatcttccac
      301 cacattccac agctcttctt cctcgcagtt ctgactaaac tcctagagga ccgctaagca
      361 tctggttgct gacagaacac ggtctggacc cagggtgatc atgccaactg actggacttc
      421 aaccctggaa gctacatcat tggccccaga agatcctggg agctccagtg agggattagt
      481 gtccttcatg gatgtgacta tagatttcag cagagaggag tggcagcatc tagaccctgc
      541 tcaaaggagt ctctaccggg atgtgatgca ggagacctac agccacctgc gctcagtgga
      601 agaactgcag cagaccggcg accactatca gcaaatagaa cctaagtcgg ccagtgatat
      661 ggtcttcatc aagaagaccg tggatgcaga gagtcgccac gaatacgcgg gcgttagaac
      721 ggtgatccac gtgaactcat acactgttcc ctcccccacg aggctccgtt accgtgaccc
      781 acttgccagt gacccggagc ataatttaaa tttacagact cgtcatgaga gtaatgaacc
      841 aaagagaggt cagaagatta ccgaatatgg taagatttca tcctattcca acaccaatca
      901 cactctcaca ggagagaaat tacaggacca tggtcagtgt gaaagagccc tcagctatga
      961 acaagtacct tgtcggtatc agaaatcata cgaatgtgct gaatttggga agactcttac
     1021 ccagaagcca cagcggaccg tacacgtgaa atctacaaga gacaggctct atgtgtgcct
     1081 tgaatgcggg aaggcgtgtt ctcagaaatc agaattcctc acgcatcaaa aaacccacac
     1141 tagagagaag cgctatccat gcggcaactg cggaaagtcc tttttccaag cgtcttctct
     1201 cttcaggcat cagaggattc acactggaga aaagctctac gagtgcggcc actgtgggaa
     1261 aggcttctcg tacaactcag acctcaggac ccatcagaag atccatacag gagagaggca
     1321 ttacagctgc gccgactgtg gcaaggcctt cgcacaaaag tccacactca agattcacca
     1381 gaaaatccac acgggagaca gggcctacat ctgtattgag tgtgggcagg ctttcatcca
     1441 gaagacacac ctggtctcac accgacggat tcacactgga gaaaagccac accagtgcga
     1501 cagctgcggc aaatcctttg tttccaagtc ccaactccag gtccaccagc gaattcatgc
     1561 aagagtgagg ccctgtgtaa ctcccgacca cgggaagacc ttcagcatta gtcccagctt
     1621 cacacgtaag aaagttccgg taagagagaa atcgtccgct tgcactgagt gtgggaaggc
     1681 ctttacctac aggtcagagc taatcattca tcagagaact cacaccggag agaagcctta
     1741 tcagtgtggg gactgtggca aggccttcac ccagaagtca gccctcaccg tgcaccgaag
     1801 aatccacaca ggagagaagt cgtacgcgtg tgtaaaatgt gggctggctt tcgtccagaa
     1861 ggcacacctg gtcgcacatc aggtaattca caccggagag aaaccttaca catgtggtca
     1921 ctgtgggaaa ctctttactt ccaagtctca actccacgta cacaagcgga ttcacacagg
     1981 ggaaaaaccg tacgtgtgca gtaaatgtgg gaaggccttt gccaacaggt caaacctcat
     2041 cacgcaccag agaatccaca caggggagaa gtcctatgtc tgttcaaggt gtggaaaagc
     2101 cttcactcag agatcagacc tggttacaca ccagagaatt catactgggg agaagccgta
     2161 tggatgtagc atttgcggga aagcttttac ccagaagtca cacctcagca tacaccagac
     2221 gattcacacc ggtgagagac agtacaaatg cctcgactgt gggaaagcct tcaaccagaa
     2281 gtcgattctc attgtgcacc agaaaatcca caccggggag aaaccctacg tgtgcaccga
     2341 gtgtgggaga gctttcatcc ggaagtccaa cttcatcacc caccaacgaa tccataccgg
     2401 cgagaaacct taccgatgca acgactgcgg gaagcccttc acctccaagt cgcagctcct
     2461 ggtgcaccag ccaatccaca cgggccagaa acctcacgtg tgtgccgagt gtgggaaaac
     2521 ctttagtggc agatcaaacc tcagcaagca tcagaagacg cacactgggg agaagccgta
     2581 catgtgttct gagtgcggga agaccttcag gcagaagtca gagttgatta cccaccacag
     2641 aatccacacc ggggagaagc cttacgattg cagtggctgc gggaaatcct tcaccaagaa
     2701 atcccagctc caagtgcatc agagaattca caccggagag aggccttaca cgtgtgctga
     2761 gtgcgggaag gccttcaccg acaggtccaa catgaataag caccaaacaa tacacaccag
     2821 agagaaacct cataagtgtg tagtctgtgg ggaaggtttt gtgcagaagt cggcgctcag
     2881 tgcccaccag agtcttcaca cccaagcggt atgagggaga actcataccg aggatgtgtc
     2941 ttactgtaat tactgcctct gtggcacaga acagcatgta tattgttgta actaaaactg
     3001 ccacggaaca gtgacacata tcactgctca gaaaaggatg tcagagaagg cactgaattc
     3061 ccattacggg ggaaggacat ttctactcgc tgagaagaaa cggcgtcaat tggatacaat
     3121 gaaagctttt ggtgtcaatt ggatacaatt aaagctttct catggggaaa aacaccgggc
     3181 ggaacactgt taccaagttc tccagcagaa cgatcatctc agctcacact gaggcaaatc
     3241 ctgttggtgg agtgtggaca ctgccaacta atcgatggta atgtaatgta cgcgacaggg
     3301 atcatcttct cttctgacac ttgtttgctg caaacattaa cagacccatg ggcgtctttg
     3361 ccctcttggg cgcatccgtt ccttctgttg agcgagatac actacaggcc tgggtatggc
     3421 atttcatgtc agtaattcca accttcagga agagctgagg caggaggatc accatgagtt
     3481 caaggccagt ctgagctaca gggtaagaca actgtgtcaa aagcaagaga gaaagaccac
     3541 agtgacgaca tatccagaca cgagcttgag tgtgctcgtg gactcgccgc tgtcatttac
     3601 ctgtaacgga ctttataagc tacccgtaac tatttttgtc aaaagcaacc aacatgttgt
     3661 ctcctacctc aagtatcatg tcttttgaat ttcccttacc ctcaggaagt ctcgaagtaa
     3721 aaatgttaag atca
//
