LOCUS       NM_001399418            3187 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus zinc finger protein 263 (Zfp263), mRNA.
ACCESSION   NM_001399418 XM_006245830
VERSION     NM_001399418.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3187)
  AUTHORS   Yin,Y., Morgunova,E., Jolma,A., Kaasinen,E., Sahu,B.,
            Khund-Sayeed,S., Das,P.K., Kivioja,T., Dave,K., Zhong,F.,
            Nitta,K.R., Taipale,M., Popov,A., Ginno,P.A., Domcke,S., Yan,J.,
            Schubeler,D., Vinson,C. and Taipale,J.
  TITLE     Impact of cytosine methylation on DNA binding specificities of
            human transcription factors
  JOURNAL   Science 356 (6337) (2017)
   PUBMED   28473536
REFERENCE   2  (bases 1 to 3187)
  AUTHORS   Frietze,S., Lan,X., Jin,V.X. and Farnham,P.J.
  TITLE     Genomic targets of the KRAB and SCAN domain-containing zinc finger
            protein 263
  JOURNAL   J Biol Chem 285 (2), 1393-1403 (2010)
   PUBMED   19887448
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000010.1.
            
            On Jan 7, 2022 this sequence version replaced XM_006245830.4.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360186.1795290.1,
                                           SRR26360176.1415705.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMN12840117 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-654               JAXUCZ010000010.1  12276934-12277587   c
            655-835             JAXUCZ010000010.1  12275711-12275891   c
            836-909             JAXUCZ010000010.1  12275174-12275247   c
            910-1033            JAXUCZ010000010.1  12274772-12274895   c
            1034-1150           JAXUCZ010000010.1  12273286-12273402   c
            1151-3187           JAXUCZ010000010.1  12270785-12272821   c
FEATURES             Location/Qualifiers
     source          1..3187
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q12"
     gene            1..3187
                     /gene="Zfp263"
                     /note="zinc finger protein 263"
                     /db_xref="GeneID:287076"
                     /db_xref="RGD:1307301"
     exon            1..654
                     /gene="Zfp263"
                     /inference="alignment:Splign:2.1.0"
     CDS             262..2304
                     /gene="Zfp263"
                     /codon_start=1
                     /product="zinc finger protein 263"
                     /protein_id="NP_001386347.1"
                     /db_xref="GeneID:287076"
                     /db_xref="RGD:1307301"
                     /translation="MSMAAGPSSQEPEGLLIVKLEEDCTWSQEVPPPEPEPSPEASHL
                     RFRRFRFQDASGPREALNQLQELCRGWLRPEMRTKEQILELLVLEQFLTILPQEIQSR
                     VQELRPESGEEAVTLVERMQKELGKLRQQVTNQGRGAEVLLEEPLPLETAGESPSFKL
                     EPMETERSPGPRLQELLDPSPKRDSQAVKERALSAPWLSLFPPEGNVEDKDMTGTQLP
                     ESLEDMAMYISQEWDHQDHSKRAPSRDMVQDSYENVGTLESCIPSQEVSSTQVEQGGK
                     PWDPSVQTCKEGMNPRNPVLGVEKFENQERSVESVSPESTHPPVLLPGQARREVPWSP
                     EQGRLDDREGHWECPPEDKIEESLMGTPSCRGLVQAKEQPKKLHLCALCGKNFSNNSN
                     LIRHQRIHAAEKLCMDVECGEVFGGHPHFLSLHRTHVGEEAHKCLECGKCFSQNTHLT
                     RHQRTHTGEKPFQCNVCGKSFSCNSNLNRHQRTHTGEKPYKCPECGEIFAHSSNLLRH
                     QRIHTGERPYRCSECGKSFSRSSHLVIHERTHEKERLDPLPECGQGINDSAPFLTNHR
                     VEKKLFECSTCGKSFRQGMHLTRHQRTHTGEKPYKCILCGENFSHRSNLIRHQRIHTG
                     EKPYTCHECGDSFSHSSNRIRHLRTHTGERPYKCSECGESFSRSSRLTSHQRTHTG"
     exon            655..835
                     /gene="Zfp263"
                     /inference="alignment:Splign:2.1.0"
     exon            836..909
                     /gene="Zfp263"
                     /inference="alignment:Splign:2.1.0"
     exon            910..1033
                     /gene="Zfp263"
                     /inference="alignment:Splign:2.1.0"
     exon            1034..1150
                     /gene="Zfp263"
                     /inference="alignment:Splign:2.1.0"
     exon            1151..3187
                     /gene="Zfp263"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agccgttggc ttatgacgcc taactcgcgc gctgagactt gcgccgcggg cctgagacat
       61 aagttctgtg tgggcctggg aagccggtca ggtggcgacg ctgcaggcct attattgcca
      121 agatctggac ctgggttctt ctagcgggat taggagcccg gggtctctcg gctacagcag
      181 cggtggcctg ctgttgtaca gaacctaggg cgtctttcaa ggcggacgta gctggtttca
      241 agacctaggc actctgggga catgagtatg gctgcgggtc cgagctccca ggagccagaa
      301 gggctcctga tagtgaaatt ggaagaggac tgtacctgga gccaggaggt acccccgcct
      361 gaaccagagc ccagccccga ggcctcccat ctgcgttttc gacggttccg ctttcaagac
      421 gcctctggtc cccgagaggc ccttaaccag cttcaggagc tttgccgtgg gtggctacgg
      481 ccggagatgc gcaccaagga gcagatactg gagctattgg tgctggagca gttcttgact
      541 atccttcccc aagagattca gagcagggtg caggagctgc gcccagagag cggcgaagaa
      601 gcagtaaccc ttgtggagcg tatgcagaaa gaacttggga aactgaggca acaggtcaca
      661 aaccaagggc ggggagcaga agtgcttttg gaggagcctt tgccactgga aacagcagga
      721 gagtcaccga gcttcaagct ggagccaatg gagactgagc gaagccctgg ccccaggctg
      781 caggagctgc tagaccccag ccccaaaagg gactcccagg ctgtaaagga gagggcatta
      841 tctgctccct ggctctctct ctttcctcct gaagggaatg tggaagataa ggatatgact
      901 gggacccagt tgcccgagag cctcgaggac atggcaatgt atatctctca ggagtgggac
      961 catcaggacc atagtaagag agctccctca agggatatgg tgcaagatag ttatgagaac
     1021 gtggggacac tagagtcctg cattcccagt caggaggtct cgagcaccca agtggaacaa
     1081 ggagggaagc catgggatcc aagtgtccag acttgcaagg aaggcatgaa ccccagaaac
     1141 ccagttctag gagtggaaaa gtttgagaac caggaaagga gcgttgagtc tgtctctcct
     1201 gaaagtaccc atcctccagt gctgctccct ggccaggcta gaagggaggt gccctggagt
     1261 cctgagcagg gaagacttga tgacagagaa ggacattggg aatgtccacc agaggacaaa
     1321 atagaggagt ccttaatggg aaccccaagt tgtagaggac tggtacaagc aaaagaacag
     1381 cccaagaaac tccatttgtg tgccttgtgt ggcaagaact tttctaataa ctcaaaccta
     1441 attaggcacc agagaataca cgcagcagaa aagctgtgta tggatgtaga gtgtggtgaa
     1501 gtctttggtg gacacccaca ttttctgtca ctgcacagaa cacatgtagg agaggaagct
     1561 cataagtgcc ttgaatgtgg aaagtgcttc agtcagaata cccacctcac ccgccatcag
     1621 cgtacccaca cgggggaaaa gcctttccag tgcaatgtct gtggaaaaag cttctcttgc
     1681 aactccaacc tcaacagaca ccagaggaca cacactgggg agaagcccta caagtgccct
     1741 gagtgtgggg agatctttgc tcacagctct aacctgcttc ggcaccagag gatccacact
     1801 ggagagaggc cctatcgctg tagtgaatgt ggcaaaagtt tctctcggag ttcacatctt
     1861 gttattcatg aaagaaccca tgagaaagag agacttgatc ctttgcctga gtgtgggcaa
     1921 ggcataaatg acagtgcccc ctttcttaca aaccacagag tggagaagaa actctttgaa
     1981 tgttccactt gtgggaaaag tttccggcag ggcatgcacc ttaccagaca tcagagaaca
     2041 cacacaggag aaaaaccata taagtgtatc ctttgtgggg aaaacttctc tcacagatct
     2101 aacttaatca ggcaccagag aattcacaca ggagaaaaac cttatacttg tcacgagtgt
     2161 ggagacagtt tttctcacag ttccaaccgg attcgtcacc tgagaaccca tacaggagaa
     2221 agaccatata aatgttctga atgtggagaa agcttctctc ggagctcacg cctcacaagt
     2281 catcaaagaa cgcacactgg ttagaaatgg tgggatttcg ttttgcctca gttgtagcag
     2341 aaagctgact ttccagagct gatattttct gcctcctttg gtgtattttg ctggtaatta
     2401 atataaagag aaaatgggac ttttttaagg gaggtacaga ggtgaagaac tagcttaaaa
     2461 ctaaaaagtt cagtcttcag aagtaagaaa gaatttaagg actttgagat agcctgctcg
     2521 gggatggttt tctatgaagt tcatcctatt ttcagatata tctaccttta ttgtttttcc
     2581 caagtatggt ttgggtacag tactgagtct agtatctatc ccatcaattt tggggctacc
     2641 tatggcttca actccttatt tgtgacatta agcaggagaa cttggcctcc tgaggccctt
     2701 aagaccaaag aagggctagg tcctgtgagg ccagtttaag gtcaacaaga cccagtttta
     2761 agttgcaggg ggtttttttg ttttgctttg tgtttttttt ttgtttttgt tttgttttat
     2821 tttaaggccc tggctgggaa gtcctgggca gtccaattct gccattgcaa cacccctctg
     2881 agtagtttgg ttggagtgtt cattggcata aaaagtgaac tagagagatg ggaagtcata
     2941 atgtggaatc cacagaagaa cccagcattt tgcagattaa gggtatgtga ttacagtcta
     3001 cctttctaga gatttgagac tttcttccac ctgttgaaag gtacctagag ctctatagac
     3061 atgattatga gtggaaggtt ccatgatttc atcagataca aaaaacagat cctagagaaa
     3121 ttaggaatta tgtccccgtt gagaatgttt ggagggttta taataaatat ctccaaggaa
     3181 acatgaa
//
