LOCUS       NM_001108995            6741 bp    mRNA    linear   ROD 27-MAR-2024
DEFINITION  Rattus norvegicus zinc finger protein 26 (Zfp26), mRNA.
ACCESSION   NM_001108995 XM_001076886 XM_345906
VERSION     NM_001108995.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 6741)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 6741)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000008.1.
            
            On Jan 1, 2009 this sequence version replaced NM_001108995.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC166711.1, SRR26360186.1746493.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-58                JAXUCZ010000008.1  27261592-27261649   c
            59-177              JAXUCZ010000008.1  27261213-27261331   c
            178-330             JAXUCZ010000008.1  27254265-27254417   c
            331-413             JAXUCZ010000008.1  27253759-27253841   c
            414-522             JAXUCZ010000008.1  27253058-27253166   c
            523-608             JAXUCZ010000008.1  27250992-27251077   c
            609-735             JAXUCZ010000008.1  27250114-27250240   c
            736-819             JAXUCZ010000008.1  27249013-27249096   c
            820-902             JAXUCZ010000008.1  27248204-27248286   c
            903-6741            JAXUCZ010000008.1  27241522-27247360   c
FEATURES             Location/Qualifiers
     source          1..6741
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q13"
     gene            1..6741
                     /gene="Zfp26"
                     /gene_synonym="RGD1565847"
                     /note="zinc finger protein 26"
                     /db_xref="GeneID:367033"
                     /db_xref="RGD:1565847"
     exon            1..58
                     /gene="Zfp26"
                     /gene_synonym="RGD1565847"
                     /inference="alignment:Splign:2.1.0"
     exon            59..177
                     /gene="Zfp26"
                     /gene_synonym="RGD1565847"
                     /inference="alignment:Splign:2.1.0"
     exon            178..330
                     /gene="Zfp26"
                     /gene_synonym="RGD1565847"
                     /inference="alignment:Splign:2.1.0"
     CDS             306..3176
                     /gene="Zfp26"
                     /gene_synonym="RGD1565847"
                     /codon_start=1
                     /product="zinc finger protein 26"
                     /protein_id="NP_001102465.2"
                     /db_xref="GeneID:367033"
                     /db_xref="RGD:1565847"
                     /translation="MDITSLSCESLFSDDQICSQEEETEGESTLGEDCDKDEAVDCAQ
                     EEWTLKDPTQSSRPGDVAVEDHTNLATAELEKQLQTKDSAPEQDFLARHTFMETQQVD
                     AVTFEDVAVDFTQEEWTSLDPIQRTLYREVMLENYQNLATVGGQLFKPSLISWLERKV
                     ELTVMEQGILQEWEMHLKTKRTALQQDRFWSDMSNGMQLGRELSGGELGDSIQVGTVF
                     SEDSCPQTYISTPSTEDTSACHLRGKDFLPPLKETSTEENILQLNQCVKPLTLTPDVS
                     QRMCTLEKSVECSDCGKTFVNELELQAHSSSHSENNLHKPEECGQAFTHPVSHDGHVI
                     PTEKKYYECKKCEKFFTHPVYLNIHVQSHTVEKPYDCKECGKAFTERSSLIVHLRQHT
                     REKSYECKECGKTFIQPSRLTEHMRSHTGEKPYQCDQCGNAFASSSYLTTHLRTHTGE
                     KPFECNICGKAFTRSSYLLGHIRTHTGEKPYECKVCGKAFSGRSWLTIHLRKHTGERP
                     YPCTECEKAFTSFAQLTEHIKTHTGEKPFRCKVCARTFRNSSCLKTHFRIHTGIKPYK
                     CNYCGKDFTARSGLTKHVLIHNGEKPYECKECGKAFSTSSGLVEHIRIHTGEKPFECY
                     QCGKALAHSSSLVGHLRTHTGEKPFECNQCDKTFTRSSYLRIHMRTHTGEKPYECKEC
                     GKTFPERSCLTKHIRTHTGERPYECKECGKGFISFAQLTVHIKTHSSERPFQCKVCTK
                     SFRNSSSLETHFRIHTGVKPYKCSYCGKDFTARSGLTIHLRNHTGEKSYACQECGKAF
                     STSSGLIAHIRSHKGEKPFECDHCGKAFASSSYLNVHLKIHTGEKPFQCTVCGKTFTC
                     SSYLPVHMRTHTGEKPFQCIICGKSFLWSSYLRVHMRIHTGEKPYVCQYCGKAFTEHS
                     GLNKHLRKHTGEKPYEYKDSGEAFTTSTDANEHETPHWGENL"
     exon            331..413
                     /gene="Zfp26"
                     /gene_synonym="RGD1565847"
                     /inference="alignment:Splign:2.1.0"
     exon            414..522
                     /gene="Zfp26"
                     /gene_synonym="RGD1565847"
                     /inference="alignment:Splign:2.1.0"
     exon            523..608
                     /gene="Zfp26"
                     /gene_synonym="RGD1565847"
                     /inference="alignment:Splign:2.1.0"
     exon            609..735
                     /gene="Zfp26"
                     /gene_synonym="RGD1565847"
                     /inference="alignment:Splign:2.1.0"
     exon            736..819
                     /gene="Zfp26"
                     /gene_synonym="RGD1565847"
                     /inference="alignment:Splign:2.1.0"
     exon            820..902
                     /gene="Zfp26"
                     /gene_synonym="RGD1565847"
                     /inference="alignment:Splign:2.1.0"
     exon            903..6741
                     /gene="Zfp26"
                     /gene_synonym="RGD1565847"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cttcgcgcgg ccccgttctc tttttctcga cagtagcagg ccggctgggc gggttctgaa
       61 agaaaagaat ttccgccgcc gttggagtcc agcttggctc cccatagccc cacgaacctg
      121 gccatcctct tcactgtgag cagtgggagg aatttgatgg aacagaaaag ttccagggag
      181 tctaagtcat ccagattaaa gagaaatgaa catcgtcatt ttccactttg atgcataagt
      241 tttcctgacg tgttcttgga gtcacaggag aatttggtca catattttac catcagacta
      301 aaacgatgga cattactagt ttgtcctgtg agagtctgtt ctctgatgac caaatctgca
      361 gtcaagaaga agagacagag ggagaaagca cgctgggaga agactgtgat aaggatgagg
      421 ctgtggattg cgctcaggaa gagtggaccc taaaggatcc gactcagagc agcagacctg
      481 gtgatgtggc agtggaggac cacacaaact tggccactgc agaattggaa aagcaactac
      541 aaaccaaaga ttcagcacca gagcaggatt ttctggcgag acacaccttc atggagacac
      601 agcaggtgga tgcagtgacc tttgaagatg tggctgtgga ctttacccag gaagaatgga
      661 cttccctgga tccaattcag agaaccctct accgagaggt gatgctggag aactaccaga
      721 acctggccac agtaggaggt cagctattta aacccagcct gatctcttgg ttggagcgga
      781 aagtagagtt gacagtaatg gagcaaggaa ttctccaaga atgggaaatg caccttaaga
      841 caaaaaggac agcacttcag caggatagat tttggtcaga tatgtcaaat gggatgcaac
      901 tgggaagaga actcagtgga ggggagctgg gtgactctat tcaagttgga acggttttta
      961 gtgaagattc atgccctcag acttacatta gtactccaag tacagaggac acttcagcat
     1021 gtcatttacg tggaaaagat tttctgccac cccttaaaga aacttctact gaagagaaca
     1081 ttcttcagtt gaaccagtgt gtaaaacctt tgactttgac accagatgta tcccagagaa
     1141 tgtgcactct ggaaaaatca gttgaatgca gtgactgtgg gaaaactttt gttaatgagt
     1201 tagaacttca ggcacatagt tcttctcata gtgaaaacaa tctccacaaa ccagaggagt
     1261 gtggacaagc ttttactcat cctgtaagcc atgatgggca tgtaattccc actgaaaaaa
     1321 aatactatga atgtaagaaa tgtgaaaagt tttttacaca tcctgtgtac cttaatatcc
     1381 atgtgcaaag ccacactgtg gagaaaccct atgactgtaa ggaatgtgga aaagccttca
     1441 ccgaacgctc aagcttaatc gtccatctcc gacaacacac gcgagagaag tcttatgagt
     1501 gtaaggaatg cgggaaaacc tttattcaac cctcacgcct tacagagcat atgagaagtc
     1561 atacaggaga gaagccgtat cagtgtgacc agtgtgggaa cgcctttgcg tcttcctctt
     1621 accttactac acatttgagg actcatactg gagagaagcc ctttgagtgt aacatatgtg
     1681 ggaaagcgtt cacacgctct tcttacctgc taggtcacat acgaactcac acaggtgaaa
     1741 agccctatga atgtaaagta tgtgggaaag ccttcagtgg ccgttcttgg cttacgatac
     1801 acttacggaa acacactggc gagagaccct atccgtgtac agaatgtgag aaagccttca
     1861 ctagctttgc tcaactaact gaacatataa aaactcacac tggtgagaag cctttccggt
     1921 gtaaggtatg tgcaaggacc tttagaaatt cctcatgcct taagactcac tttcgaattc
     1981 acactggaat aaaaccatac aaatgtaatt actgtgggaa agacttcact gcacgttcag
     2041 gccttactaa gcatgtactg attcacaatg gggagaagcc ctatgagtgt aaggaatgtg
     2101 ggaaagcctt cagtacatct tctggccttg ttgaacatat aagaatccat acaggagaga
     2161 agccctttga atgttatcag tgtgggaaag ccttggctca ttcctcatct cttgttgggc
     2221 atttacgaac tcatactgga gagaaaccct ttgagtgtaa tcagtgtgac aaaacattta
     2281 cacgatcttc ttatcttcgc attcatatgc gaactcacac cggagagaaa ccatatgaat
     2341 gtaaagagtg tgggaaaact ttccctgagc gctcatgcct tactaaacac atacgaacac
     2401 atactggaga aaggccctat gaatgtaagg aatgtgggaa aggcttcatt agctttgctc
     2461 aactgacagt acacataaaa acccacagtt ccgagagacc ttttcagtgt aaggtatgca
     2521 caaaatcctt tagaaactct tcatcccttg agacccactt ccgaattcac actggagtaa
     2581 aaccctataa atgcagttac tgtgggaaag acttcactgc tcgttcaggc cttactatac
     2641 atttacgaaa tcacactggg gagaagtcct atgcatgcca agaatgtgga aaagccttta
     2701 gcacttcctc aggccttatt gcacatataa gaagtcacaa aggagagaaa ccctttgaat
     2761 gtgaccactg tgggaaagcc tttgcttctt cctcttatct taacgtgcat ttgaaaattc
     2821 acactggaga aaaacccttt cagtgtacag tatgtgggaa aacatttaca tgttcttctt
     2881 accttcctgt tcacatgcga actcacactg gagagaagcc ttttcagtgt ataatatgtg
     2941 gaaagtcatt tttgtggtcc tcctaccttc gagttcacat gcgaattcac actggagaga
     3001 aaccctatgt atgccagtac tgtggaaaag cctttacaga gcactcaggc cttaataaac
     3061 atttacggaa acacacagga gagaaaccat atgaatacaa ggacagtggg gaagccttca
     3121 ctacttccac tgatgctaat gaacatgaaa ctccccattg gggggagaac ctttgaatgt
     3181 aagggattca gaaaattgag agcccttaat ctatcatttg caatccaaat tcatagtctg
     3241 tacaagtctt attaataagc aatgtataaa aacattcatt tgctatgtgc tgtaaaagca
     3301 actcattctg aggacgctct gagtttaagg attgtgggag aaatcaaact ttcatggtct
     3361 atgtatgaac tgaaggtttg taatataggg aacgagaacc tttagtgttt ccatgtgtgt
     3421 agacacaaga cctatagaaa cgtcatagat gttgttcttt gttcacttac ggtctcacgg
     3481 tggagcagcg tcttactgaa gcttgggaag taacttttta catttgactt tatgtggtgt
     3541 ttacagcctg aacacaagct acttgtgtgt agtagggaat ttgcttcagt gacttggatg
     3601 gcaacatttg gatttcctgg gtgcttctat atgaactttg aatatttcta catttgttta
     3661 ttattatgac ttcaattatg aatttctaaa ttccattgtt ggttttcctt tttaaaatat
     3721 ttctgtttga tatgaatgaa actattgttt ttttacctag tatctgtcct atgtcccatg
     3781 tcagcattgg gaagtaatgg acacaaactc ccatctcctc attacttgtt acttatttgt
     3841 tgtgtcttgc acccgttgta cattgtccat acctcccctc tctttgttgt tgtttcttct
     3901 tctttttttt tttttttttg agacagtctg actttgtggc ctagcctact atgaaaatca
     3961 tgtagcctag acagatccct agctcatggc agtcctggca gccttctcag tgcatagatt
     4021 acaggtgcga gccaccatac ctggctcttt ctactgtctt aaaaaaccat catgttttac
     4081 aatagtgttc aagtactaaa cacaggtacg tttggatctg accaacacaa atccctcact
     4141 ctgagttcca aatctttggt agccattatt ccactctgat tggagctcag cttttcttta
     4201 ggttctgctt cttcgatcat gtagtgtctg tagtaactct acttagcttc tttatttttg
     4261 tgacagggtc ttgctgtagc ttaaactgac ctcaaactcg caaccttttt gcctcagact
     4321 ttactgctgg agttataggc atatgctgcc atgcctacct ggtgtatatc aatttacatg
     4381 atgttcttaa ggtggaactg tggtatggtc agttatttta agacatttaa ttattctttg
     4441 gtctctatgg atacctagtt tccatccctt gcttgttagg agtattgctg cattgactga
     4501 ctatagctgt ctttttaaat ttgagttcat tcagatacaa tccctaaagt gagtttgtta
     4561 ttgtaatgat aaatataagt cagtgcgtat gtaacaacgg cccacttata ttaccaatga
     4621 cgtacctagt ctttgtattg cttatcttct ttttctttct atatgccgtt taaaaatgtg
     4681 agatgatggt atcttcagat ttgatttgca gttttctaat ctataaacaa tttgtatatc
     4741 tttgctaaaa atattgattt cagttattta tcaattttaa aatcaagata agtgtatttt
     4801 gctgtgaagt taactgagtt actatgtttt agacatagac ccattgtaat atatatggtt
     4861 tacagatttt cttttgtctg tgtatatgct tttccagatt tgttttttgt attgttttgc
     4921 aaaatcttta gtttgacatg gccctaattc tttatttttg cttttaatgc ccatggcttt
     4981 ttttgtcagc tctaaaattc gttgctggag tatctcgaag cattcttaga gttttattgt
     5041 gctacaattt tagattttac tttcaggggt ttgtttgttt gaggtaatct cactaatgta
     5101 atccaagata gcatagaact caccttgtag accaggctgg ccttaaactt ggagcagtat
     5161 ttctttccca gaccgcttga gtgctgagat tttggatttg agccagccta tccaacttaa
     5221 ctatatttct tttatgatta tttaattaca ttttcttttc ttttaaagcc ataagagtgt
     5281 gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtactt tctgtttctg tatactgtta
     5341 ttgtttctgt tttggtgcta ggaattaaat ttgtggcctc aagaatgcta ggtatgtgct
     5401 ctaccatcaa gctatagttc taaattcatg tggaccataa aaaagggttc ttttgttttt
     5461 tgtttgtgtt tggggtaatc tctctgtaga tctggctggc ctagaacctg ctatgtaaac
     5521 caggttagcc tgaaactcac aagagatcta cctgtctgcc tcccagagtg ctggaattaa
     5581 aattatgcgc ccctatgcct agcaatgact gtgcttattt gtaaacaatt tgtttatatt
     5641 gtttgtatca acattttact gattgatttc tgcctacaca gtgggtttta tatttgctgt
     5701 tctttcttaa gacaaggttt catggagctt agcctggctt tgaaattaac taaatggtca
     5761 agaacaacct tggacttgtg atcttcttgc ctccatctcc ccagtaggat tcttggcatg
     5821 caccaccaca tttgcagtgc ttgagtatcg agcttcacac taagtgaact tctccagccc
     5881 tgtaatacat tgttaagcct aaagttttgt ttttactggg tttaactgaa aggttttggt
     5941 tttttatgac tttgtctttt tttttttttt tttttataaa cctgtgaaaa aaatgccatt
     6001 agaatcgata atgtagtgtt aatctacaaa gcactttggg taggatggac gttgtaacaa
     6061 tggtaattct ccaaggtgtg tggcttacca tgcaatttgt ttatagttta tagttcttgg
     6121 tagtttatac tttttcctgt ttaattttgt tctctatcat tttatgtagc tttacatgtt
     6181 acatagtatt ttgcttttta aatttgtagt atgtaaagac actattgact tgaaaaattt
     6241 tacactttat gaatttctta tagttttttt ttcatggatc ccctgttaac tgaaaccatt
     6301 ttacttttct tacttgtgtg actttttttc ttatcccaat tgctccatct aggcttttcc
     6361 cagcatttcc tgacaaaaag aaggaaaggt aggtacacct gtccttgaca agttggagct
     6421 ttgtaaccga atgaaaactt aacttgtttt tcatgtactg ccattattga tgaagtacat
     6481 ttctatctaa tttattgact taagcatcag ttgatatcct atgttacacg atcctgtaca
     6541 tttcctgcag tgtacaaatc gtacatggac ttttctttga ttttgttcat tcagtatatc
     6601 acatttattt gtataaacca tttttgcatc ccatttataa aatcaatctt gatcatagtt
     6661 tgtacggtct ttttaaaaat tatgttataa aattaccagg agattgaaat tgtcttaata
     6721 aataataatt tttattattt a
//
