LOCUS       XM_039108791            4744 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 248 (Zfp248),
            transcript variant X1, mRNA.
ACCESSION   XM_039108791
VERSION     XM_039108791.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Jan 31, 2024 this sequence was replaced by
            NM_001427587.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4744
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4744
                     /gene="Zfp248"
                     /note="zinc finger protein 248; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     ESTs, 16 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 92 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:500304"
                     /db_xref="RGD:1561270"
     CDS             691..2421
                     /gene="Zfp248"
                     /codon_start=1
                     /product="zinc finger protein 248 isoform X1"
                     /protein_id="XP_038964719.1"
                     /db_xref="GeneID:500304"
                     /db_xref="RGD:1561270"
                     /translation="MNKSQEQVSFKDVCVDFTKEEWYLLDPAQKVLYRDVILENYSNF
                     VSVGHCVTKPDVIFKIEQGEDPWIPENGFQCHPERKWKVDDLLESKRENQDGRFWPLM
                     LTNKNTDLESGGNTRKTSSADIDSVSARSFLLKVCDSCEMNLKNLSAVIISKKSYSRK
                     KLTEFNIYKQALPDSRPEKIPVGTASCEYDGEREVLDLCRNLTRPISGQPFEYSEAGQ
                     GFREGVALCTSQNSQLGETLRKHTECGRTFVDSLKLSVSQKTHLHAEPHECSICRKSF
                     YVDLQFGHQRAISGNSPYERSEYEKLFCDHSAFIVHQEAYTRKISQEYKVSNRTWGKP
                     ALFKHQIIQIGGKPYEYHENRKNFSKKSHPTQSRRAHVGEKTFECGECGKMFWEKSNL
                     TQHQRTHTGEKPYACTECGKAFCQKPHLTNHQRTHTGEKPYECKQCGKTFCVKSNLTE
                     HQRTHTGEKPYECNACRKSFCHRSALTVHQRTHTGEKPFICNECGKSFCVKSNLIVHQ
                     RTHTGEKPYKCNECEKTFCEKSALTKHQRTHTGEKPYECNVCGKTFSQRSVLTKHQRI
                     HTRVKALLAS"
ORIGIN      
        1 gtaaccaggg accagcgggg gggcctgtct gggggatgtg ctggggtgcg ttaggacgtc
       61 ggggctcggg tttgcggggt tcgggtagtc ccgcacctct gcaaagctaa tttagggccg
      121 ctagattgtg cggcgcgtgc gcattttgcg cactaggcgg gaagatgcag ggttgtaggg
      181 cgggaccgtg aggagttgac gcacgcgtag cgcgagtatg acgcggtgac gcatgcgttc
      241 tttggctgct gggaccagat gctgggatgt ggggggcgag cgggcaagcc aggtcccgag
      301 tgaatgaatt actgggacag aataacccac gcaagactcg gtttcctttt gtgcgtgcag
      361 agtgtgacta ttacgaatac ttgctgcagt tttctttctt tttctttttt aaagctgcaa
      421 ctagtacttc ttgcgcaggg aataccctgt gagggtcgca ggggagctca acctcgctgg
      481 gggcctttgg attggtccct aaggttctgt gtttggagcc accaagcctc cagccactca
      541 catacgcgag atcccagttc tgaatttggt actcggtcat ggcttttgcg taatgacaca
      601 gtatcctgaa actatggaag actgtgtgct cgccgaaagt ctgggacaag tttaaggaga
      661 gagctttccc tcctccactc agagcagaaa atgaacaaat cccaggagca agtgtcattc
      721 aaggatgtat gcgtggattt caccaaggaa gagtggtatt tgctggaccc cgcccagaag
      781 gtgctttaca gagatgtgat cctggagaat tatagcaact ttgtctcagt agggcattgt
      841 gttactaagc cagatgttat cttcaagata gagcaaggag aagatccctg gataccagaa
      901 aatggattcc aatgtcaccc agaaaggaaa tggaaagtgg atgacctctt agagagcaag
      961 cgggaaaatc aagatggacg tttttggcca ctcatgctca ccaacaagaa cacagatcta
     1021 gagagtggcg gtaacacaag aaaaacgtcc agtgcagaca ttgactctgt ttctgcaaga
     1081 agttttctgc ttaaagtatg tgactcgtgt gaaatgaatt taaagaatct ttcagcggta
     1141 attattagca aaaagagcta ttccagaaag aagcttactg agtttaatat atataagcaa
     1201 gcactccctg atagtaggcc tgagaaaatt cctgtaggaa cagcatcatg tgaatatgat
     1261 ggggaaaggg aggtcctcga cctttgccgg aatctcactc ggccaatttc tggccagcct
     1321 tttgagtata gtgaagcagg acaaggcttc cgtgagggag tggctctttg tacaagtcag
     1381 aactctcagc taggggagac tctccgtaag cacactgaat gtggaagaac tttcgttgac
     1441 agtttgaagc tcagtgtatc tcagaaaact catttgcatg cggagcctca tgaatgcagt
     1501 atttgtagaa agtccttcta tgtggattta cagtttgggc atcagagagc tatctcagga
     1561 aacagtccgt atgagcgaag tgaatatgag aaactcttct gtgaccattc agctttcatt
     1621 gttcatcagg aagcttacac aagaaagatc tcccaggagt ataaagtgag taacagaact
     1681 tggggaaagc cagctctctt taaacatcag ataatacaga tcggggggaa accctatgaa
     1741 taccatgaga ataggaaaaa tttcagcaaa aaatcacatc ccactcagtc ccgaagagct
     1801 cacgtgggag aaaaaacatt tgaatgtggt gaatgtggta aaatgttttg ggagaaatcg
     1861 aaccttaccc aacatcagag aacacacaca ggagagaaac cctatgcatg tacggaatgt
     1921 ggaaaagcct tctgccagaa gccacacctt accaaccatc agcggacaca tacgggagag
     1981 aaaccctatg agtgcaagca gtgcgggaaa acgttctgtg tcaagtcaaa ccttactgaa
     2041 catcaaagaa cacacactgg ggagaaaccc tatgaatgca atgcatgtag gaaatccttt
     2101 tgccaccggt cagccctaac cgtccatcag agaacacata caggagagaa accatttata
     2161 tgcaatgagt gtgggaagtc attttgtgtg aagtcaaacc tgattgtaca tcagagaact
     2221 cacacggggg agaaacccta taagtgcaat gagtgtgaga aaaccttctg tgaaaagtca
     2281 gctcttacta aacaccagag aactcacact ggggagaaac cctacgagtg taacgtgtgt
     2341 ggaaagacct tcagtcagag gtcagtactc accaagcatc agagaatcca cacgagggta
     2401 aaagctcttt tagcatcctg aatgtttagc ttttgcatgc ctgtcaagtc agttgtacaa
     2461 ttttaaatat gagcttagag cctgccaaag aatgccacag agtattaaca aataccactt
     2521 tgttggaatg catgaaagct ttcaagaaat taagaacttt catttgtttg tattgaaggg
     2581 aaattattta tataaataat atggttaaaa aaaccttaga aattaaatcg tgtaatgtct
     2641 tccaaatgtg tttcagaatt gtatttaaat ataatgacta atattaattt tacttgtatt
     2701 cataggaaag tatgaaactt aaaaatgagg gcctacagca ttaaccatac atgtaaagaa
     2761 catcctgtgt ttatacaccc tttgcgagta tgttaatgta acagaagtcc agggaaccct
     2821 tgatttatgt gttggaaccc agaaagaatg tgaggaagaa atatgaaccc ttagtttaat
     2881 aactgtatgg tatacttttc atactaaata ccaccagcgt ctttataggt tgataggact
     2941 gtgtgtttct ggacatgtct gtgaatgtga tctagatgta tgtgtctgta aacacacttg
     3001 catgcgtgta gctgcacaca gtggtgctgt cataaaggca gctcacacca ctttaaagtg
     3061 ctgacgattg ttaaaattta ggagttctgt ggatcattgt ctaatattac atgaggttgc
     3121 agttaaatta tactgagagc aaagggaata aatagcagtc gtcattcctc acacttggca
     3181 gtatttccct gtctttgctg tgtacccttg gtctacatgc gaagagtgct gtagagcggt
     3241 gtactactgc atatttcctt cagacgccac ccacccccca tgccgtccct actctcatgt
     3301 tgatagcttg gccttagaat atttatactg tggaaactga taaaccatgt gtctgcattt
     3361 gattttctca gagaagctgt gtgtatataa agtatgtggt atatttaaaa tataaactac
     3421 ccttctttgt attttctaaa ataaataaat ggctctggcc atcattatca aactggctct
     3481 atagtaaaga agccaaaaga tggtttgtgg agcctcttaa ttacctcaga actctccagt
     3541 tctaaatact acctgtcttt tgataccttg gtcagtttgt gcttcaagtg acatattctc
     3601 tctctctctc tctctctctg tctctctgtc tctctgtctc tctgtctctc tgtctctctg
     3661 tctctctctc tctctctctc tcacacacac acacacacac acacacacac acacacacac
     3721 acacacacac tatcacagac ttttcattat tctggaccat gagtaagtat ggccattatt
     3781 accaaactac ccatttgatc aggaaatcaa acagtatttt tctgagtttt tcttagctac
     3841 ctctatgtca atcatataaa tgctgttaat aaaaatggta tttacatgac ttaacttgag
     3901 ttgtaagtgg taatactcta caaatctaaa agtggcagtg tataataaaa tgttcacttt
     3961 acatccttgg tatttcattg tgtgtctatt taggcatgat tatatgtaag cgcagggctg
     4021 tgtcactcag taattacata cctgtgttta gaattagaga tgcctgtata gtctctctcc
     4081 ctcccttgtt ctatttccag tacctcctgg gaacacactg atcagtagct taagagacgc
     4141 ccgtcacctt tgctgagctg agttttgtct cattgttcct ctccccagac ggtttgtgga
     4201 ataaattcag attagtcgaa gctaatcgtg gatactccgt cctggcagtt tcatttaggt
     4261 cagagaatgc tatgcggtac tggaattgtt ctcaatgaag aagttgtcat aacatgaaga
     4321 gataagaagt caaaagagac gtgaaaggga gcagaccttt tggtgtgcat ttttaggtac
     4381 ctgtccacaa tgctggcata tcgtttgtgg tctggatggg cagtggtgac agtgcaaaca
     4441 gctgagccag ggaggatggc atggaattgg ttaacccttt acaaatactt tttgttggtt
     4501 tctgggactt tgtattattt tcaataatac ctgtttcttg tttattatta ggactgtctg
     4561 gcacttggaa ctaaaggcat tccagctaat accagagata acttttccaa gtgctaatat
     4621 tctgtatgtg gtttgtggga agaatttcat ttaactgtat gatgcaggga agatgccttt
     4681 ttaaaaacca ttcttctttc tggtggaaag cagagttcct caaataaaaa gtttttaatg
     4741 atga
//
