LOCUS       XM_006253745            3060 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 169 (Zfp169),
            transcript variant X1, mRNA.
ACCESSION   XM_006253745
VERSION     XM_006253745.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051352.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006253745.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006253745.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3060
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3060
                     /gene="Zfp169"
                     /note="zinc finger protein 169; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     ESTs, 1 Protein, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 133
                     samples with support for all annotated introns"
                     /db_xref="GeneID:306816"
                     /db_xref="RGD:1304631"
     CDS             191..2383
                     /gene="Zfp169"
                     /codon_start=1
                     /product="zinc finger protein 169 isoform X1"
                     /protein_id="XP_006253807.1"
                     /db_xref="GeneID:306816"
                     /db_xref="RGD:1304631"
                     /translation="MAPGLLTTRDKALMAFHDVAVAFSQTEWKLLSPAQRILYREVML
                     ENYSHLVSLGIAFPKPKLITQLEQGTEPWRDGCLLDLCSAEPRTELEAGLSCPISFAS
                     PEVLRVCVLNGSPSQTFPSPPEGGNFQSEAPGCSSNGGGEERDNSDALLQRTSPTRIL
                     KTFFSPCQGQMAYWAEGDSKQTDLGLAPEEAVPVLKGPDESASGAVIQGAFPLGLNDV
                     TNLFSPQKHHVYPDCGGGFCQSSDLMKLQRMDGGEKPYSCSECGHQFTQKASLTVHQR
                     KHSGEKPHVCGECGRGFMYVSSLNSHKKIIHSGERPLVCPECGRGFRQKIDLLLHQRT
                     HLDKKPFVCPECGRGFCRKASLLQHRWSHSGDNPFICSVCGRGFRLLSRLLTHQITHS
                     GEKPHVCPDCGQRFGQKGTLMRHQKTHTGEKPYVCRQCGWSFTQKVNLIRHQRIHTEV
                     KPFLCPECGRAFEFKSLLTRHRKTHTGEKPYVCPQCGRGFSQKFNLIGHQRIHAGELP
                     FLCPECGRAFVKKATLIRHQRTHAGWEKPYQCPECGRTFEFKSLLTRHQKIHTGEKPY
                     VCPQCGRGFSQKFNLIGHQKTHTGEKPYACPQCGQRFRQKFNLVRHQRIHTGEKPFLC
                     AECGRAFGKKVSLIRHQRTHGEEKPYKCPECGRAFEFKSLFIRHQKTHTGEKPYVCTE
                     CGKAFSQKFNLIGHQRSHTGEKPYLCSQCGRAFGFKSLLTRHQRTHSK"
ORIGIN      
        1 cagcattctg ggtattgtag ttcccccatc tttagcgctg cgtgggtagt gaagtgcgcg
       61 cgcgtcatcc cggtcggtgt acttccgcat cctgcagtcg tcacctgtgc ctgtggacga
      121 tcctcccgcg gttctgattg gactctgaag gcagacacct ctctgaggag agtattctgg
      181 aacgtgggaa atggccccag ggctcctgac aaccagagac aaggcattaa tggcttttca
      241 tgacgtggcc gtggccttca gccagacgga gtggaagctg ttgagtcctg ctcagaggat
      301 cctatacagg gaagtgatgc tggagaacta tagccatctg gtctccctgg gaattgcttt
      361 tcccaaaccg aaactcatca cacagctgga acaaggaaca gagccctgga gagatggatg
      421 tcttctggac ctctgttcag cagaacccag gacagaatta gaggccggtc tctcctgccc
      481 gatatccttt gctagtccag aagtcctcag agtgtgtgtg ctgaatggat ctccctctca
      541 gactttccca agcccaccag aaggaggcaa cttccagtca gaagctccag gctgttctag
      601 caatggagga ggtgaagaga gagacaacag tgatgctctg ttgcagagga cgagtccaac
      661 aaggattctg aagacgttct ttagcccatg tcaaggtcag atggcatact gggcagaagg
      721 cgacagtaag caaacagacc ttggcctggc ccctgaggag gcagtcccgg tgttgaaggg
      781 acccgatgag tcagcatctg gagccgtcat acaaggagcg tttccactag ggcttaatga
      841 tgtcacaaac ctgttcagcc ctcagaagca tcacgtatat cctgactgtg gagggggctt
      901 ttgccagagt tcggacctca tgaagctcca gagaatggac ggaggggaga agccttactc
      961 gtgctcggag tgtgggcacc agtttactca gaaggcttct ctcactgtcc atcagaggaa
     1021 acactcggga gagaagccac acgtgtgtgg ggagtgtggg cgaggcttca tgtatgtatc
     1081 gtccctcaac agccacaaga agattattca ctctggagag agaccccttg tatgtccgga
     1141 gtgtgggcgt ggcttccgcc agaagataga cctcctcctc caccagcgga ctcacctgga
     1201 taaaaagccc ttcgtgtgcc ctgagtgtgg gaggggcttt tgccggaagg cctcactact
     1261 gcaacaccgg tggtcacact ctggtgacaa ccccttcata tgctcagtgt gtgggcgtgg
     1321 cttcaggctg ctctccaggc ttctcactca tcagatcacc cactccgggg agaaaccaca
     1381 cgtttgcccc gattgcgggc aacgctttgg ccaaaagggt acgctcatga gacatcagaa
     1441 gacacacaca ggggagaagc cttacgtgtg tcgccagtgt ggctggagtt tcacccagaa
     1501 ggtcaacctc attaggcacc agaggattca tacagaggta aaacctttcc tgtgccccga
     1561 gtgtggacga gcctttgagt ttaagtcgct cctcaccaga caccggaaga cacacaccgg
     1621 ggagaagccc tatgtgtgcc cccagtgcgg tagggggttt agccagaagt tcaacctcat
     1681 tgggcatcag aggattcatg caggggagtt accttttctg tgtcctgagt gtgggcgtgc
     1741 atttgtaaag aaggccacgc tcatccgaca ccagaggacc cacgcagggt gggagaagcc
     1801 ttaccagtgc cccgagtgtg gacgaacctt tgagtttaaa tcgctcctca caagacacca
     1861 gaagatacac acaggggaga agccttatgt gtgtcctcag tgtggtaggg ggtttagcca
     1921 gaagttcaac ctcattgggc accagaagac gcatacaggg gaaaagccct atgcctgtcc
     1981 ccagtgtggc cagcgtttca ggcagaagtt caacctcgtt aggcaccaga ggattcacac
     2041 aggggagaag ccgttcctct gcgcagagtg tgggcgagca tttggaaaga aggtctctct
     2101 cattagacac cagaggaccc acggagagga gaaaccttac aagtgccctg agtgtggacg
     2161 agcctttgag tttaagtctc tcttcatcag acaccagaag acacacacgg gggagaagcc
     2221 ctatgtatgc accgagtgtg gcaaggcttt tagccaaaag ttcaacctca ttgggcacca
     2281 gaggagccat acaggggaga agccttacct gtgctcccag tgcgggcgtg cttttggttt
     2341 taagtcactt ctcaccagac accagaggac acactccaag tagaagaggc tttttgtaaa
     2401 cagcttatgt gggtagggag tggatgggat gccacacctc acgtctgact agaggactca
     2461 gtccagttgg tagagaagcc tttggcttta actctgccct catcagacat cagcagacct
     2521 actctggcaa gaagccctta agtgcaggga tcgtgggcgt ggcttcagct ggacgtttca
     2581 cctccacaga cttaggaaga cccaagtgtg ggccatcggc tcctagcctg agaggtgttt
     2641 gcctgacctg ttgtttcctt tccccaggat cagggagctg gcagaaatca ctagtgaatg
     2701 ttcctggaaa tagagtaggg gaaaagtcct tgcttgttca tgaaatcatt ggtttattgt
     2761 ttattatctt tggttaatag tatgtgttag ttttctaggg cttcctaaca aaataccccg
     2821 gaccgtacag cttaggcaaa agaaatttac tctgctgtat atatggagcc tagaagtcct
     2881 ctgtcaaacc ggctcaggtg ttgctgtagc cacacctccc cgtagcgggt ggatggcttc
     2941 ctgatgtgct gtgcacctac aggtccatcc ctcctgtata tactttcctg gtgcctctca
     3001 tcctggacca catccagatg accttgttta atcttgagta aatgtcctgc ctccaagtca
//
