LOCUS       NM_172325               3362 bp    mRNA    linear   ROD 29-MAR-2024
DEFINITION  Rattus norvegicus zinc finger and BTB domain containing 14
            (Zbtb14), mRNA.
ACCESSION   NM_172325
VERSION     NM_172325.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3362)
  AUTHORS   Li,Y., Klena,N.T., Gabriel,G.C., Liu,X., Kim,A.J., Lemke,K.,
            Chen,Y., Chatterjee,B., Devine,W., Damerla,R.R., Chang,C., Yagi,H.,
            San Agustin,J.T., Thahir,M., Anderton,S., Lawhead,C., Vescovi,A.,
            Pratt,H., Morgan,J., Haynes,L., Smith,C.L., Eppig,J.T.,
            Reinholdt,L., Francis,R., Leatherbury,L., Ganapathiraju,M.K.,
            Tobita,K., Pazour,G.J. and Lo,C.W.
  TITLE     Global genetic analysis in mice unveils central role for cilia in
            congenital heart disease
  JOURNAL   Nature 521 (7553), 520-524 (2015)
   PUBMED   25807483
REFERENCE   2  (bases 1 to 3362)
  AUTHORS   Orlov,S.V., Kuteykin-Teplyakov,K.B., Ignatovich,I.A., Dizhe,E.B.,
            Mirgorodskaya,O.A., Grishin,A.V., Guzhova,O.B., Prokhortchouk,E.B.,
            Guliy,P.V. and Perevozchikov,A.P.
  TITLE     Novel repressor of the human FMR1 gene - identification of p56
            human (GCC)(n)-binding protein as a Kruppel-like transcription
            factor ZF5
  JOURNAL   FEBS J 274 (18), 4848-4862 (2007)
   PUBMED   17714511
REFERENCE   3  (bases 1 to 3362)
  AUTHORS   Shakib,K., Norman,J.T., Fine,L.G., Brown,L.R. and
            Godovac-Zimmermann,J.
  TITLE     Proteomics profiling of nuclear proteins for kidney fibroblasts
            suggests hypoxia, meiosis, and cancer may meet in the nucleus
  JOURNAL   Proteomics 5 (11), 2819-2838 (2005)
   PUBMED   15942958
REFERENCE   4  (bases 1 to 3362)
  AUTHORS   Wang,J., Kudoh,J., Takayanagi,A. and Shimizu,N.
  TITLE     Novel human BTB/POZ domain-containing zinc finger protein ZNF295 is
            directly associated with ZFP161
  JOURNAL   Biochem Biophys Res Commun 327 (2), 615-627 (2005)
   PUBMED   15629158
REFERENCE   5  (bases 1 to 3362)
  AUTHORS   Lee,K.H. and Lee,Y.S.
  TITLE     Cloning and characterization of zinc finger protein 161 in Rattus
            norvegicus
  JOURNAL   DNA Seq 15 (4), 310-313 (2004)
   PUBMED   15620221
  REMARK    GeneRIF: Single exon, start codon in a separate exon. Expressed at
            high levels in spleen, brain, lung and kidney.
REFERENCE   6  (bases 1 to 3362)
  AUTHORS   Sobek-Klocke,I., Disque-Kochem,C., Ronsiek,M., Klocke,R.,
            Jockusch,H., Breuning,A., Ponstingl,H., Rojas,K., Overhauser,J. and
            Eichenlaub-Ritter,U.
  TITLE     The human gene ZFP161 on 18p11.21-pter encodes a putative c-myc
            repressor and is homologous to murine Zfp161 (Chr 17) and
            Zfp161-rs1 (X Chr)
  JOURNAL   Genomics 43 (2), 156-164 (1997)
   PUBMED   9244432
  REMARK    Erratum:[Genomics 1997 Nov 1;45(3):633]
REFERENCE   7  (bases 1 to 3362)
  AUTHORS   Numoto,M., Niwa,O., Kaplan,J., Wong,K.K., Merrell,K., Kamiya,K.,
            Yanagihara,K. and Calame,K.
  TITLE     Transcriptional repressor ZF5 identifies a new conserved domain in
            zinc finger proteins
  JOURNAL   Nucleic Acids Res 21 (16), 3767-3775 (1993)
   PUBMED   8367294
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000009.1.
            
            On Jul 23, 2014 this sequence version replaced NM_172325.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643299.40891.1,
                                           SRR26643292.38792.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-84                JAXUCZ010000009.1  116780100-116780183
            85-3362             JAXUCZ010000009.1  116782029-116785306
FEATURES             Location/Qualifiers
     source          1..3362
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /map="9q38"
     gene            1..3362
                     /gene="Zbtb14"
                     /gene_synonym="Zf5; Zfp161"
                     /note="zinc finger and BTB domain containing 14"
                     /db_xref="GeneID:282825"
                     /db_xref="RGD:628712"
     exon            1..84
                     /gene="Zbtb14"
                     /gene_synonym="Zf5; Zfp161"
                     /inference="alignment:Splign:2.1.0"
     CDS             82..1431
                     /gene="Zbtb14"
                     /gene_synonym="Zf5; Zfp161"
                     /note="zinc finger protein 161 homolog"
                     /codon_start=1
                     /product="zinc finger and BTB domain-containing protein
                     14"
                     /protein_id="NP_758828.2"
                     /db_xref="GeneID:282825"
                     /db_xref="RGD:628712"
                     /translation="MEFFISMSETIKYNDDDHKTLFLKTLNEQRLEGEFCDIAIVVED
                     VKFRAHRCVLAACSTYFKKLFKKLEVDSSSVIEIDFLRSDIFEEVLNYMYTAKISVKK
                     EDVNLMMSSGQILGIRFLDKLCSQKRDVSSPDESNGQSKSKYCLKLNRPIGDAADAQD
                     DDVEEIGDQDDSPSDDTVEGTPPSQEDGKSPTTTLRVQEAILKELGSEEVRKVNCYGQ
                     EVESMETPESKDLGSQTPQALTFNDGMSEVKDEQTPGWTTAASDMKFEYLLYGHHREQ
                     IACQACGKTFSDEGRLRKHEKLHTADRPFVCEMCTKGFTTQAHLKEHLKIHTGYKPYS
                     CEVCGKSFIRAPDLKKHERVHSNERPFACHMCDKAFKHKSHLKDHERRHRGEKPFVCG
                     SCTKAFAKASDLKRHENNMHSERKQVTPSAIQSETEQLQAAAMAAEAEQQLETIACS"
     exon            85..3362
                     /gene="Zbtb14"
                     /gene_synonym="Zf5; Zfp161"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atctggcttg cccctgatca gacttactct gatctgaaga ttttgttgtt taaggcatta
       61 agaaaatagc ctgaattgtt catggagttt ttcatcagta tgtctgaaac tataaaatac
      121 aatgacgatg atcataagac gctgtttctg aaaacgctga acgaacagcg cctggaagga
      181 gagttctgtg acatcgccat cgtggtggaa gatgtgaagt tcagagccca ccgctgtgtc
      241 ctcgccgcct gcagcacgta ctttaagaag ctgtttaaga agctggaagt ggatagctct
      301 tctgtcatag agatagattt cctccgttcc gacatatttg aagaggtgct gaactacatg
      361 tacacagcaa agatttccgt gaagaaggag gacgtcaacc tgatgatgtc gtccggtcag
      421 attcttggca tccgcttttt ggataaactg tgttcccaga agcgcgacgt gtccagcccg
      481 gatgaaagta acggccagtc caagagtaag tattgcctca agttaaaccg ccccattgga
      541 gacgctgccg atgctcagga cgatgatgtg gaagaaatcg gggaccagga tgacagccct
      601 tctgacgaca cggtggaggg cactccccca agccaggagg acggcaagtc tcccacgacc
      661 actctcaggg ttcaggaagc gattttgaaa gagctgggga gtgaagaggt tcggaaagtg
      721 aactgctacg gccaggaggt ggaatccatg gagactcccg agtccaaaga tctggggtct
      781 cagacccccc aagccttaac ctttaacgac gggatgagcg aggtgaaaga cgaacagact
      841 cctggctgga cgacagcagc cagtgacatg aagtttgagt acctgctcta cggtcaccac
      901 cgggagcaga tcgcctgcca ggcgtgcggg aagacgtttt ctgacgaagg caggttgagg
      961 aagcatgaaa agctccacac ggcagacagg ccatttgtct gtgagatgtg tacaaagggt
     1021 ttcaccaccc aggcccatct gaaggaacac ctaaagatcc acacggggta taaaccatac
     1081 agctgtgagg tgtgcgggaa gtcgtttatc cgcgccccag acctgaagaa gcacgagaga
     1141 gttcacagca acgagagacc gttcgcctgt cacatgtgcg acaaagcctt caaacacaag
     1201 tctcacctca aggaccacga gagaagacac agaggggaga agccttttgt gtgcggctcc
     1261 tgcaccaagg cctttgccaa ggcctcggat ctgaagaggc acgagaacaa tatgcacagt
     1321 gaaaggaaac aggtcacccc cagtgccatc cagagcgaga cggaacagtt gcaggccgca
     1381 gcgatggccg ctgaggcgga acagcagcta gagacaattg cctgtagcta gaggtggtgg
     1441 gtcaggaaca ctcggcccgg gaggtggtcg cttgaacact tctgtgctgg caggacctaa
     1501 ggcagtgtgc actccggtta ggtaattctc agatttctca aggcagttat gttcctacgt
     1561 tctgaccaaa cagtttgagg ttttttttgt ttgtttgttt ggttgttttt tttttgtttt
     1621 gttttgtttt gttttttgtg atgtctaaag ttcatattct caataagttc ctctaccctt
     1681 ctttatggtt ttagttcgaa atctcctttg tctagtttaa aatggatggc ttctgtcccg
     1741 tccagaatcc ctcaagtctt accaagctgg tgagtgcact gcggagagtc actgaaataa
     1801 attgatttcc ccaatcatcc cagtgtatgt gactactcat ggtcaaaaca gcagttttaa
     1861 taactggata caagaacttt atatataggg tgcagacagt gttggcacgc gctgacccag
     1921 aacactgcag aagtacaaaa ccaaatgtgg aaaaatggaa tggtgttgag ttttatattt
     1981 ggtttgtgat ttctctctct ctcacataca cacacacaca cacacacaca cacacacaca
     2041 cacacacgtt tttcactgtt cctgtggaca aacagtggtt gctttcctga agtgtttctt
     2101 catccattgt aatggcccct gtacccaccc atgctgcggg tcatgtggta cctcagggtg
     2161 agcgagatca ccaggaggct ggtggtgttg aaaccgagtt cctcttttgt ccagtgtggc
     2221 catactgtct gtgtgtgtct gtgcggtgga ccagtatcga ctggaggaga agagtctaag
     2281 acaaggtttt tacagattaa aacaaaacaa aaaaaaaaca aaaaaaaaag ccctaaggtt
     2341 tcctaggtct tgaaattgtg actggttttg tatttaagat caaaattagg acaaggaaca
     2401 gagatgtttc ttcagatgtt tgtgtagctt gcaggtcgtc aagcttgggg tgggggcatc
     2461 tctgcagcac tcaggttccc gtgaagaaga cgctcgctta cgtgaatgtg aaatccttta
     2521 agtgtgtaaa tagtagtgtt ggtctcatgc atttcgagaa aaaggacagc tgcaatgttt
     2581 tttcctttcc tttttttttt ttcttcttct tttttttacg cagtggatta aagtaccttt
     2641 cactggcaac aagtctcaga ccccttcaac caacgttaga gaccatcaga cgaaccgtcc
     2701 atgttctcca aatgtgtttt atcattggtg gttgcagttt tcgatggaag ctgattgcct
     2761 tgtcatagcc ataaatcaga attatgaact ttgttacaga ttgggcgtac taaatgctct
     2821 tttgactgtt tccttaggaa tatattgaaa tgccaacgga gttcggatta tgttctgtaa
     2881 gaaagtgtag accattgttt taggatgtgt acagttgtag aaggtgccag ctttaagagt
     2941 tcatgttttg gttcttaagg tttttctttt ttcttttttg tttataaatg catcaaagta
     3001 atttcattac atggcttgcc gtactaacat ctgttattac tgttgtgaga aaatttttta
     3061 ctttcaaaac cggtgtacat gtttatgccc gagattgtcg gatggagaag ctaccgttaa
     3121 gatttttttt taatttattt ttaaaatgta ttggcttaaa ttaatttttc cctgagcggt
     3181 ttgttctgtt tcgaaggcaa tcccgtcagt tcgactatgc tgttagtagg ggggggccaa
     3241 ctggtgatcc tgggctgtgt taaccaaagc aaatgtgaga tcagctggca tcctgttaat
     3301 agctatttca acaaaccata ttttgggcct ttgtttttgt atataaagat aatgatacac
     3361 tt
//
