LOCUS       NM_001405359            2963 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus zinc finger protein 146 (Zfp146), transcript
            variant 1, mRNA.
ACCESSION   NM_001405359 XM_039093809
VERSION     NM_001405359.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2963)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 2963)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Apr 25, 2023 this sequence version replaced NM_001405359.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360194.2131751.1,
                                           SRR26360194.2492310.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN12840111, SAMN12840113
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-91                JAXUCZ010000001.1  94549225-94549315   c
            92-2963             JAXUCZ010000001.1  94537054-94539925   c
FEATURES             Location/Qualifiers
     source          1..2963
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q21"
     gene            1..2963
                     /gene="Zfp146"
                     /gene_synonym="Znf146"
                     /note="zinc finger protein 146"
                     /db_xref="GeneID:102555183"
                     /db_xref="RGD:7630088"
     exon            1..91
                     /gene="Zfp146"
                     /gene_synonym="Znf146"
                     /inference="alignment:Splign:2.1.0"
     exon            92..2963
                     /gene="Zfp146"
                     /gene_synonym="Znf146"
                     /inference="alignment:Splign:2.1.0"
     CDS             855..1733
                     /gene="Zfp146"
                     /gene_synonym="Znf146"
                     /note="zinc finger protein OZF-like"
                     /codon_start=1
                     /product="zinc finger protein OZF"
                     /protein_id="NP_001392288.1"
                     /db_xref="GeneID:102555183"
                     /db_xref="RGD:7630088"
                     /translation="MSHLSQQRILSGGSPFACKVCGKLFSHKSNLTEHEHFHNREKPF
                     ECNECGKAFSQKQYVIKHQNTHTGEKLFECNDCGKSFSQKENLLTHQKIHTGEKPFEC
                     KDCGKAFIQKSNLIRHQRTHTGEKPFICKECGKTFSGKSNLTEHEKIHIGEKPFKCSE
                     CGTAFGQKKYLIKHQNIHTGEKPYECNECGKAFSQRTSLIVHVRIHSGDKPYECNVCG
                     KAFSQSSSLTVHVRSHTGEKPYGCNECGKAFSQFSTLALHLRIHTGKKPYQCSECGKA
                     FSQKSHHIRHQKIHTH"
ORIGIN      
        1 gagtgcgcag acgcagggca gcgagtggac attttggtct ttgtccgcgg gtcagcacgg
       61 cggtcgggtc cacgtggcgc caaagtagga gaagcggctg aggaatgcca agcacataga
      121 gcaacgccga cactgggaca gcagtttatc caccaaggag agtggaaggc aagaattgga
      181 acactgcttc ctgtgctcac agacttcatt tcttttcttt cggaacagac atcaagtttt
      241 aaaaggcgaa acatttttta aagcttaaag ctttgcgctt gaaacataat ttagatttaa
      301 acagagagtt gtatgggatg aatcctctgc tacatatggt ttgggaatcc tctatgacga
      361 cctcctgctg gtaggagcct cttataagag agcagcgtgg agatgcctgc actttgttag
      421 tggactgcac agaccagagg aaagcctctg agtttcctga aggccggaag catttaccta
      481 agggaagcat ttgcctaagt gtcctccgcc ctggacagag aagtcatgct gagaggaagc
      541 cctgtgtctc taagaaatat tgaaaagcct ttagctagat gacggctttc tcagccttgc
      601 tggaggaaaa caagtgaact ttgcaaaaac accattgact attagtaaaa cttacccttg
      661 gaagaaaggt ttataccaat aaagttctct taaactttct cccctgctcc gcatttgaat
      721 gaatagtcag acccagagag aagccttaga actgtaagaa atgtggagac atcctcagtc
      781 aggagcaaac cctccttcat ccaaactttc gtattggaga taaacgctgt gaatgtgata
      841 aagcttctat tcagatgtca cacctcagtc agcagaggat tttaagtggg ggaagcccct
      901 ttgcctgtaa ggtatgtgga aaactcttta gccacaagtc gaatcttaca gagcacgagc
      961 attttcataa tagagagaag ccttttgaat gtaacgagtg tgggaaagcc tttagccaga
     1021 agcagtatgt cattaagcat cagaacactc acaccggaga gaagctcttc gagtgtaatg
     1081 attgtgggaa atcctttagc cagaaggaaa acttgcttac ccatcagaag attcacactg
     1141 gagagaagcc ttttgagtgc aaagactgtg ggaaagcttt cattcagaag tcaaacctca
     1201 tcagacatca gagaactcac acgggagaga agcccttcat atgtaaggag tgtgggaaaa
     1261 cctttagcgg caaatcaaat cttactgagc acgagaagat tcatattggt gagaaaccct
     1321 ttaagtgtag tgagtgtgga acagcgttcg gccagaagaa gtacctgata aagcatcaga
     1381 acatccacac cggagagaaa ccgtatgagt gcaatgagtg cggaaaggcc ttctctcagc
     1441 gaacgtcact cattgtgcac gtgagaattc attcaggcga taagccgtac gaatgcaatg
     1501 tatgtgggaa agccttctct cagagttcat ctctaaccgt gcatgtgagg agccacacgg
     1561 gtgagaaacc ctatggctgc aatgaatgtg ggaaggcctt ttctcagttc tcaaccctgg
     1621 ccctgcatct gagaatccac acaggtaaga agccttatca gtgcagtgag tgtgggaagg
     1681 ccttcagcca gaagtcccat cacatcagac accagaaaat ccatactcac taaacgctct
     1741 gtgaatgtct tcagtacggg gaagtgttca ttagcagtct acacctcatg gtacatcatt
     1801 tggtcattct gaggctgagc accataaatt agccaaacat ttaatgtacg atgctgtgaa
     1861 caccggagaa ctcctactga agggaaagaa gtgtgtgtga tcaaaagcct gcactcggca
     1921 aagcagcaga aaagaaaagc agtgctgaac cgtgaacacg gtcgtctaca atggagactg
     1981 gcaaacaggt cctgctgacg gctgtcagcg tagatctgca ggtcttcaca gttagtgagg
     2041 acagacatta gagaatgcta actacattta ccaggactta gaatatgaaa ataattgctt
     2101 cagctgaaca ccaagactat gtttggaggt aaattattct ctgaggagca aacctgcaca
     2161 ccacaaacta taacctgata gtaaaagtaa aatatatgga tattgaaagt agaaatatag
     2221 aaatgctgta catcatacaa ggttgacttt ggagagggaa aacattcctt gtaacatttg
     2281 aaaatacttg ggaagtctca tgagtattta tgctccggag gtgaggcacc aggaaattta
     2341 ccatgacttt agtttagagc agcccagtgt tagcactcaa ctgccggttt ggcctggatg
     2401 aggaagcact cgggactcct tcgcagacat tggcaggtgc aggagatggg gtgtgagtga
     2461 ctggagggac ggaaagtgct gtggggagac tcagtttaca ggaggatgca tacagtacag
     2521 tgactcccaa gttaaatctc ctcctctgag ctcctgtcac ggcatatatg cacatgtatg
     2581 taaatgagat gcatcagaag gatgcggacc aactgctgag agtgaggaag ggaagcggga
     2641 gggggagggc aggcttcagc tttcatacaa gcattcattc tcttaaagac gcaggtaaat
     2701 atatgaagat attggctaat tttcagttgt gttatatgaa tatcatgtct tattttttgt
     2761 acttttctgt atttttcaaa ataagaatgg aggtaatggt gggaactctg cacctgtaga
     2821 gctgttatag ttgtttaatt cccaatcaaa tactgagctt ttatagagat atttctaaaa
     2881 ctttaacatg acagtgagtg gatggacttg gcactctgtg taatgaaatt atctatttta
     2941 ttaaagttta aaatgacagc ata
//
