LOCUS       NM_001408853            4450 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus zinc finger protein 136 (Zfp136), mRNA.
ACCESSION   NM_001408853 XM_006254394
VERSION     NM_001408853.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4450)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000018.1.
            
            On Jun 28, 2022 this sequence version replaced XM_006254394.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360176.777754.1,
                                           SRR26643429.53267.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-138               JAXUCZ010000018.1  882747-882884
            139-265             JAXUCZ010000018.1  886538-886664
            266-4450            JAXUCZ010000018.1  886841-891025
FEATURES             Location/Qualifiers
     source          1..4450
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="18"
                     /map="18p13"
     gene            1..4450
                     /gene="Zfp136"
                     /gene_synonym="RGD1565635"
                     /note="zinc finger protein 136"
                     /db_xref="GeneID:291802"
                     /db_xref="RGD:1565635"
     exon            1..138
                     /gene="Zfp136"
                     /gene_synonym="RGD1565635"
                     /inference="alignment:Splign:2.1.0"
     CDS             112..1803
                     /gene="Zfp136"
                     /gene_synonym="RGD1565635"
                     /note="zinc finger protein 709"
                     /codon_start=1
                     /product="zinc finger protein 136"
                     /protein_id="NP_001395782.1"
                     /db_xref="GeneID:291802"
                     /db_xref="RGD:1565635"
                     /translation="MLEVRSSAMDSISFKDVAVNFTAEEWALLNSSQKRLYRDVMQET
                     CRNLAAIAKKQEDCILEDDSENLWKNFPISIQTEYKLCESQEYAEKPGTCKECGKFFS
                     SPQSFLKHVKTHTEEKTYKYKQTEDGFSRHNFVQGHERMHATEKPYVLKQSGKDSLTL
                     AGIQQHIITHNGDGPYICKVCGKVFHSSSSFLTHKRAHTGEQLYICKQCGKTFTYSSG
                     LRRHERTHSGEKPYECKQFLKVFPSLRKVESHEQTHNGIKYICNQCGISLSEHSSLQC
                     HETIHSLGKPYVYKQCGKTFTCSSALRRHERIHTGVKPYECKVCKKAFIDCSSLQCHE
                     RIHNGEKPYVCKLCGKAFSRQGSLKCHERIHSGEKPYACKQCGKAFMHHNALRYHEQI
                     HRGEKAYGCKQCGKAFVLSSALKKHERIHSGLKPCLCKVCGKAFTFHSSLHCHERTHT
                     GEKPYVCKQCGKAFMYHSSLRCHENIHTAEKPYVCKLCGTAFTYHSSLQRHERIHRGE
                     KPYVCKFCAKAFTDHSSLRCHERIHTGEKPYVCKQCGKSYSTQGSLRYHERVHCV"
     exon            139..265
                     /gene="Zfp136"
                     /gene_synonym="RGD1565635"
                     /inference="alignment:Splign:2.1.0"
     exon            266..4450
                     /gene="Zfp136"
                     /gene_synonym="RGD1565635"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tttcttttgg gcaacgctct tgtcactgct ctctctgtct gctgagggag cttggagtcg
       61 ctggattata agaggctgta gaactgctcc accctggagc cgcgtgtaag gatgcttgaa
      121 gtccggagct cagccatgga ctctatatcc tttaaggatg tagctgtgaa cttcaccgca
      181 gaggagtggg ctttgctaaa ttcttcccaa aaaagactgt acagagatgt gatgcaggaa
      241 acctgcagga acctggctgc catagcaaaa aagcaagaag actgtatcct tgaagatgac
      301 tctgaaaatt tatggaaaaa ttttcccatt tcaattcaga ctgaatacaa actatgtgag
      361 agtcaagaat atgcagagaa accaggcaca tgtaaggagt gtgggaaatt ctttagttct
      421 ccccaaagtt ttctgaaaca tgtgaagact cacactgaag agaaaactta taaatataaa
      481 caaactgaag atggttttag cagacacaat tttgttcaag ggcatgaaag aatgcatgct
      541 acagaaaagc cctatgtgtt aaagcagagt gggaaagact ctttgactct tgctggtatt
      601 caacagcaca taataacaca taatggagat gggccatata tatgtaaagt atgtggtaaa
      661 gtctttcact cttccagttc tttcttgaca cataaaagag ctcacactgg agaacagctt
      721 tatatatgta agcaatgtgg caaaaccttc acttattcta gtggccttcg ccgccatgaa
      781 aggacccata gtggagagaa accctatgaa tgcaagcaat ttctgaaagt ctttccttct
      841 ttgaggaagg ttgaaagtca tgaacaaact cacaatggaa taaaatacat atgtaatcaa
      901 tgtgggatat ccctcagtga gcacagttcc cttcagtgcc atgagacaat tcatagttta
      961 gggaaaccct atgtatacaa gcaatgtggg aagacattca cttgttctag tgccttgcga
     1021 agacatgagc gaattcatac tggagtgaaa ccctatgaat gcaaggtatg caagaaagcc
     1081 ttcattgatt gcagttctct tcagtgtcat gaaaggattc ataatggaga gaaaccttat
     1141 gtatgtaagc tgtgcgggaa agcattcagt cgtcaaggct ctttgaaatg tcatgaaaga
     1201 atccatagtg gagaaaagcc ctatgcatgt aagcagtgtg ggaaagcctt catgcatcac
     1261 aatgctcttc gataccatga acagattcac aggggagaga aggcctatgg ctgtaagcaa
     1321 tgtgggaaag cctttgtgtt gagcagcgca ctgaaaaaac atgagcgaat ccatagtgga
     1381 ttaaaacctt gtctatgcaa agtatgtggg aaagccttca catttcatag ttccctccat
     1441 tgccatgaaa ggactcacac tggggagaaa ccctatgtat gtaaacagtg tgggaaagcc
     1501 tttatgtatc acagttctct tcgttgccat gaaaatattc acactgcaga gaaaccctat
     1561 gtgtgtaagc tgtgtgggac agccttcact tatcacagtt ctcttcaacg ccatgaaaga
     1621 atccacaggg gagagaaacc atatgtatgt aaattctgtg ctaaagcctt cactgatcat
     1681 agttccctac gatgccatga aagaattcac actggagaga aaccatatgt atgtaaacaa
     1741 tgtggaaaat cctacagtac tcagggttct cttagatacc atgaaagggt gcactgtgtg
     1801 taaactacgt cagaagacct tctccttttt gaataagttt taatttcatt aactaaaaaa
     1861 atatggttgt aagtaagctt taccatgttc tggttctcgt aaagaaatag agacacagta
     1921 gaaacttatc tctaaatata gactaaagga aagctctaga tctttttagc aaacatgagg
     1981 gcataatgaa tttaacttgt atcaatgtaa aacatatgga attatctata cttgtctcag
     2041 ttcagttctg agaaaccact atgggaatga aaagatggct tagtttgtat agtccctgcc
     2101 acagaagcat gagatcctgg gtttaaatcc tcagcacaca tgtaaaagca catgatggca
     2161 catgcttata atctcagtgc taggcagtta aagacaaaag aattcctgag ggttgctggt
     2221 tagctaggct acttgagtca gttcaggctc aataagagag ttctcaaaaa ataaagtgga
     2281 gaatgttaag gaagacaccc aacatgcaaa gggcaatagt ctggattttc ctactaggct
     2341 cttgttatca acctctatgt gcaagtacaa atatgtaccc acacatgaac actcattcac
     2401 acagtcaagc acatcacaca cataaaagaa cacaccacat caagaacctt gattagaaga
     2461 aacctgtagt ctacattggc caatatatca aaacacacag tcaaaacctt ataaatgtag
     2521 atagaattgt cctttgtagc atacaatgtc aaagtctgat acagcagaat actgttgtac
     2581 acaactgaca tgaagagcct ggtataaaat agtctgtgta gaatgcttta gaaactgcac
     2641 agtccagagg agggtttgtc agtggcacat tcataggtgc atctgaataa tacaatgtgt
     2701 tcctcacatt attcttgaaa ataaatgttt tagtgaaatt atttaataag gtttacttaa
     2761 ccttgcatgt gcttaatctg tagtttcact attagtaaag tcagttaata acttttcctg
     2821 cttttaattt aaacattgaa ttgaaatgtc tttctaatat gtgaacagtc ttcattttta
     2881 cgtattttta aaataattgt gtctaatgta cctataaaaa tgggaaagtg gctcaatgga
     2941 aaagcatcag aaatgaggcc atatctccag tacccatatg taaagctaca tgtagccaaa
     3001 acatacctgt aacatcattg ctgaaagtgg ggacagtgct ggaagattac tagtacttgc
     3061 tgggacttgc tggccagtca atctaagtga aaaacaagct ccaagattag ttcaagacca
     3121 tgtcacaagc aaagatgcag aggcagtaga agaggatgcc tgatgttgtc ctctgacttc
     3181 cactcacgca agctaggtac tcacacaaaa ggcaattaac agtctggatt ttcctacgag
     3241 gctcttgtca tggattgtat gtaaattcag aacaaatgac ttttcaagta gatttaatta
     3301 ttttttcact ttttttacct taaaaagtca ataactattt tgtctcaaat acagagttag
     3361 aaaattggtc tgagaagagg ttttgtgatg taaactagat aaagtacgta caaaatctaa
     3421 gaagtgcagg atagaagccc tgctacctag agcctgccaa ttcaagggga agccagatct
     3481 ttgatggttt ttggagttca agtgagggat tctgatcttc aggagtctgc tgctggcata
     3541 cttgacagtg atgaacttgg tgaggttttc attgactttc acaatgttct tggccatggg
     3601 ctgcatgact tccagtgttt cattctccat gtatcctgtg taatactgct gctttaaatt
     3661 cgattttcct tggctcagca ctctccgaga caggcaggaa acagcagctg cagcctgaga
     3721 aaagtgatgt catagttgat gagtatcagc tccatcagat acttggctaa agtgtgttgt
     3781 tcaacatcga cctccccggc atttgaagct catcttaagt aggtgggcaa aggccagccc
     3841 catctccaaa ttcaactttt tcaaaatcag agtctctgtt tctccgtctg tgatataaac
     3901 aaagtcttca atactcagag aaaacattac atttggaaac cagaagcaga gctgtgatcc
     3961 cagccagcta cagcttcttg ctgcagacca gcttaacctg ttggaaccag tccatgatgg
     4021 caatgcacat atatgtagtt tcctataaaa gcctaaactt ggaccagctt tttttctagt
     4081 ttcttctaaa atttcctact gtttagtcac atggctcagc tttagattaa ctgctgcatc
     4141 aatattcttc aaatcactgg atacctttga gcatcagagt agcaacatga gggccaccct
     4201 gggaagtgta ggtgaggcat agccactctg gtttatcata ccacaggagt tctatttttg
     4261 acttttaata ttgtctccaa ataagaatcc tgtgcacatt ttatagttta actattttca
     4321 acagtatata tgcatacaca cagattatat atacatatat atgtagatat gtgtgtgtat
     4381 aatgtttgta tgtatattga caacttatct gcaaaataag cataaagaga caactttact
     4441 gtttttcaaa
//
