LOCUS       XM_017598604            3901 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 3 (Zfp113),
            transcript variant X2, mRNA.
ACCESSION   XM_017598604
VERSION     XM_017598604.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051347.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Jan 26, 2024 this sequence was replaced by
            NM_001427518.1.
            
            On Jan 21, 2021 this sequence version replaced XM_017598604.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3901
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3901
                     /gene="Zfp113"
                     /note="zinc finger protein 3; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     ESTs, 3 long SRA reads, 16 Proteins, and 98% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 30 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:100912096"
                     /db_xref="RGD:6489147"
     CDS             213..1553
                     /gene="Zfp113"
                     /codon_start=1
                     /product="zinc finger protein 3"
                     /protein_id="XP_017454093.1"
                     /db_xref="GeneID:100912096"
                     /db_xref="RGD:6489147"
                     /translation="METQADHASQEPRPLLESTLSSSKVPSFPDKDSLGDKMLAAALL
                     KAKSQELVTFEDVAVYFIWKEWKRLEPAQRDLYRDVMLENYGNVFSLDGDSKTGNDQV
                     ISEGMGSCEMILGRFQKDVSQGLKFEEAYEQEVSLQRQLGSSSVGRLNRKIQEFHQVR
                     VEKKLTHMGERNEKYSEFGNNFTVNSKLTSHQRLPMGDRPHKCDECSKSFNRTSDLIQ
                     HQRIHTGEKPYECSECGKAFSQSAHLIQHQRIHTGEKPYECKDCGKTFSCSSALILHQ
                     RIHTGEKPYECNECGKTFSWSSTLTHHQRIHTGEKPYACNECGKAFSRSSTLIHHQRI
                     HTGEKPYECNECGKAFSQSSHLYQHQRIHTGEKPYECMECGGKFTYSSGLIQHQRIHT
                     GENPYECSECGKAFRYSSALVRHQRIHTGEKPLNVMGEKQKFRVSAELNIREST"
ORIGIN      
        1 tggtgagaaa ggacgacccg gaaacgatat agggaggggc aatttccgtt ctttgttctg
       61 ttctcggttg tgtgggactg tgacagggtc caagtggacc tgtttcgtgt ccggccccct
      121 aagtcttacg tccctgtccc caggtccttc aaaacctgcc tcctgcagaa tctacagcta
      181 gcagaccagc gaccagagcg tttcccctgc ccatggaaac ccaggcagac catgcatctc
      241 aggaaccccg gcccctgtta gagagcactc tttcttcttc aaaagtccct tcctttcctg
      301 acaaggacag tctcggggac aagatgttgg ctgctgcact tctaaaggcc aagtcccagg
      361 agttggtgac atttgaggat gtagctgtgt acttcatctg gaaagagtgg aagcgtttgg
      421 agcctgcaca gagggacctc tacagggatg tgatgctaga gaactatggg aatgtgttct
      481 cactggatgg tgattccaaa actggaaatg atcaagtaat ctctgaaggt atggggtcat
      541 gtgagatgat attgggacga ttccaaaagg atgtttctca gggtcttaag tttgaagaag
      601 cctatgaaca agaagtcagt ctgcaaaggc agctagggag ttcctctgtt ggaagactga
      661 ataggaaaat acaagagttt caccaagtga gagttgagaa aaagctcact catatgggag
      721 aaagaaatga gaagtacagt gagtttggga acaacttcac tgtgaattcc aaacttactt
      781 cacatcaaag acttcccatg ggagacagac cccataagtg tgatgaatgt agcaagagtt
      841 ttaatcgaac ttcagacctt attcaacatc agagaattca cactggagaa aaaccatatg
      901 aatgtagtga atgtggaaag gccttcagcc agagcgcaca tcttattcag caccagagaa
      961 tccacactgg agagaaaccc tatgaatgta aagattgtgg gaagaccttc agttgtagct
     1021 ctgctctcat tctacatcag agaattcaca ctggggagaa accttacgaa tgtaacgaat
     1081 gtgggaaaac atttagctgg agctccactc ttactcatca tcagagaatc cacactggtg
     1141 agaagcccta tgcttgcaac gaatgtggga aggcctttag taggagttcc acccttattc
     1201 atcatcagag aatccacact ggagaaaaac cctatgaatg taatgagtgc ggcaaagctt
     1261 tcagccagag ctcacacctc tatcagcacc agagaatcca cactggagag aagccctatg
     1321 aatgtatgga atgtggaggg aagttcacct acagttccgg ccttattcag caccagagaa
     1381 tccacacagg ggagaatccc tatgaatgta gcgagtgtgg gaaggccttc aggtatagct
     1441 cagctcttgt tcgccatcag aggattcaca ctggagagaa gcctttgaat gtaatgggcg
     1501 aaaagcaaaa attcagagtt tctgctgagt taaacatcag agaatccaca tgagagagcc
     1561 ataaactatt ttcctcacat cctgagtcta cagagctctt gccttacctt tttaatagga
     1621 ccaatttagg gtctgtccca cctcaaacaa ttcacttaaa gtggcgctga ctgggaaagc
     1681 atcctgacac agtgattagt aggatttccc aggaatggac agcagtctta aaaaaaattg
     1741 tgaggcaagc agtaaattaa gctctgggaa cagaaggaag cttggggacc agtcaccccc
     1801 ttttgggaag gggtttgcac taaaccaatt ttctcacacc agaagagcct ttctttccaa
     1861 ggtgggatgg atgcttattt gcaacaaaat tccaatgatt tcactagttg gagtcagtct
     1921 ggtgagcaga gaaggcaggc tgaagaatat tctgggtcac catacactct gggaagagaa
     1981 acagagaggc tgtatttcct ttttgtttgt gagacggggt ctcactatgt actcctggtt
     2041 gttcttagac cagactggct ttgaactcag agacttgctt acctctgcct ccagagtgct
     2101 aggattaaaa gcatgtacaa cacccccatt ccaatgcagg cccccagggg ctgcatttca
     2161 aaggcactct tcctaatcca gctttaatat tggacaaggg atatgctgct ttggtacacg
     2221 attctgtgaa ttcaggaaac ttggtgctga tgggattatt ttgttagggg gaaacaaaaa
     2281 aagaccccat caagggtttc tgtaatgact atcctttggg cttttggaac agttgtacca
     2341 tgttttcaag agcagtcagg cagtactgta ggcagaccac atatcttccc ttgtgacatc
     2401 actgcctgaa tctcatagga gcagttcgga acccgaggta gatcagaagc gtttagcatt
     2461 ggcctgactc cagtccgttt ttaagcttcc tgttgctgtg gtgatttaat gccagcctct
     2521 agttactaga tgctctcagg gaacttacct cccctgcttg ccctagcctc tcacatgtaa
     2581 catctggcct cagcatctgg acccctctgg atcccgcctc tgacttcagc taaagctttg
     2641 cagcagggct cctcctgggt ttgggaggtg tttcctgagt gttcccagcc caatggatgg
     2701 cttccatatt tccccagccc cgtccctcct gtagcataag tgaaatgcac tactaaacag
     2761 aactgttttt cagaagggag tgtttttgta tgggagtcac acttgtgtca gttaaaatag
     2821 cacagtgacc ataaatggaa tcctaaagtg aaacttcagg atttgaaact tttctttgat
     2881 aaactttttt tttaaatata aatgtatgta gccatcttca taccaaattc aggatcttat
     2941 gagctataca gatcattttg tgtggtctaa tgtctaagaa tggtgctgaa aactaaaaaa
     3001 gtatacttgg ctcctgtgta gcaatgggtc aacttctctg ccttgatttg acctctttag
     3061 aaggctgtta cagccatgga acatggtagg ctaggagtgt tataaagaga ttaacattaa
     3121 gatggccacg aactcacttt tttttttatg agtactgtga tttaatattt gtctttaatt
     3181 ttacaaaatt acggaaccaa tcatccaggc cacttaagca cttgttgcca ggcctgatgg
     3241 ttcaggctct aatctcaagc ttgggaggtt gatagaggaa gatcacaagt ttacggcttg
     3301 tctagactat gctgagttca aggctagctc taagcagtcc aagccgaatc tgcctcctag
     3361 tcagttttac aattagcttc aagttctgtc tttccaagca gtacaaacaa cagaattgtt
     3421 tatcaaataa aaatttagag gacatttttc actcatagca aaataaggtg gtgtatttcc
     3481 cttgttctgg agactaaacc cagtgtctca tgctgggaag gaattatgta cctcagtcta
     3541 gacgttttgc atttattttt ggtgtgtgta ttcatgcacg catatacata tcatggcatg
     3601 catgtggagg tcaatttgca gaagttggtt ctcgtgccat gtgggttcca gggatgaagc
     3661 tgaggtcacc agacctggca gggacaagag tctttgagcc atgtctctga tccaggaagg
     3721 gttttggttt tgagtttgtt tgtttgtttg tgtgtttgtt tgtttgaaac agagtttctc
     3781 tgtgtggtcc tggctgtctt agaactcact ttgtagaccc ttgtagacca ggctgtcctt
     3841 gaactcagag gtctgcctgc ttctgtctcc tgagtgctgg gattaaaggg gtgcaccacc
     3901 a
//
