LOCUS       NM_001401398            7100 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus zinc finger AN1-type containing 5 (Zfand5), mRNA.
ACCESSION   NM_001401398
VERSION     NM_001401398.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 7100)
  AUTHORS   Schmahl,J., Raymond,C.S. and Soriano,P.
  TITLE     PDGF signaling specificity is mediated through multiple immediate
            early genes
  JOURNAL   Nat Genet 39 (1), 52-60 (2007)
   PUBMED   17143286
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Jan 3, 2023 this sequence version replaced NM_001401398.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643298.7473.1,
                                           SRR26643296.4193.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-455               JAXUCZ010000001.1  228192765-228193219
            456-615             JAXUCZ010000001.1  228196706-228196865
            616-727             JAXUCZ010000001.1  228197249-228197360
            728-831             JAXUCZ010000001.1  228197940-228198043
            832-957             JAXUCZ010000001.1  228200112-228200237
            958-7100            JAXUCZ010000001.1  228200805-228206947
FEATURES             Location/Qualifiers
     source          1..7100
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q51"
     gene            1..7100
                     /gene="Zfand5"
                     /gene_synonym="Zfp216"
                     /note="zinc finger AN1-type containing 5"
                     /db_xref="GeneID:293960"
                     /db_xref="RGD:1310776"
     exon            1..455
                     /gene="Zfand5"
                     /gene_synonym="Zfp216"
                     /inference="alignment:Splign:2.1.0"
     exon            456..615
                     /gene="Zfand5"
                     /gene_synonym="Zfp216"
                     /inference="alignment:Splign:2.1.0"
     CDS             465..1106
                     /gene="Zfand5"
                     /gene_synonym="Zfp216"
                     /note="zinc finger protein 216; zinc finger, AN1-type
                     domain 5"
                     /codon_start=1
                     /product="AN1-type zinc finger protein 5"
                     /protein_id="NP_001388327.1"
                     /db_xref="GeneID:293960"
                     /db_xref="RGD:1310776"
                     /translation="MAQETNQTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNS
                     GRMSPMGTASGSNSPTSDSASVQRADATLNNCEGAAGSTSEKSRNVPVAALPVTQQMT
                     EMSISREDKITSPKTEVSEPVVTQPSPSVSQPSSSQSEEKAPELPKPKKNRCFMCRKK
                     VGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI"
     exon            616..727
                     /gene="Zfand5"
                     /gene_synonym="Zfp216"
                     /inference="alignment:Splign:2.1.0"
     exon            728..831
                     /gene="Zfand5"
                     /gene_synonym="Zfp216"
                     /inference="alignment:Splign:2.1.0"
     exon            832..957
                     /gene="Zfand5"
                     /gene_synonym="Zfp216"
                     /inference="alignment:Splign:2.1.0"
     exon            958..7100
                     /gene="Zfand5"
                     /gene_synonym="Zfp216"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtcagtcgtc cggatcgtgg agctgtgtgc atctcgtcgt cagtcgtccg ctcgccgccc
       61 gaagtcgcgc agcttccctg gcgaacgcgg aagcccgaag agcgccgtcc tcgggccctg
      121 tcggcgctca ggccccttcg cgcgcctcct cgctcggccg ggacgttgct gtggaggcgt
      181 gaggcgccgg cggtcgagca cctggagcga cggtagcccg cggcctgcgg ttcttctcct
      241 cccccgccgc cctcccaccc gagctgcggc ggggctcggc cgcctcggtg cttctgcacg
      301 aacaaaggag gcccccgcgg cgccggcgca gctccatctg cggtccgatc cacccgggcc
      361 cgcggcggcc gctagccagc ccttcccgga ggcctcagcc cggcccaccg cccggcgtcg
      421 cgcgccagct cgctagtgca tccgggcccc gcaggcacaa aaatatggct caggagacta
      481 accagacccc agggcccatg ctgtgtagta ctggatgtgg cttttatggg aatcctagga
      541 caaatggaat gtgttctgtt tgctacaaag aacatcttca gagacagcag aatagtggca
      601 gaatgagccc aatggggaca gctagtggtt ccaacagtcc tacctcagac tctgcgtctg
      661 tacaaagagc agatgctact ttaaacaact gtgaaggtgc tgctggcagc acatctgaaa
      721 aatcaagaaa tgtgcctgtg gctgccttgc ctgtaactca acaaatgaca gaaatgagca
      781 tttcaagaga ggacaaaata acctccccga aaacagaggt gtcagagcca gttgtcactc
      841 agcccagtcc atcagtttct cagcccagtt cttctcaaag tgaagaaaaa gctcctgagt
      901 tgcccaaacc aaagaagaac agatgtttta tgtgtagaaa gaaagttggc cttacagggt
      961 ttgactgccg atgtggaaat ttgttttgtg gacttcaccg ttactctgac aagcacaact
     1021 gtccttatga ttacaaagca gaagctgcag caaaaatcag aaaagaaaat ccagttgttg
     1081 tggctgaaaa aatccagaga atataaaatt actacatgtg aagagactga aactttgttt
     1141 ttattttaat atatcgtagg aaaacattaa agagcagatg catggccatt ttcctttgat
     1201 gttctccaga gttttgcttt atacttgtct gtcatataat tgatatttta ggatgtttgg
     1261 gtgtttgtta caggcagaat tggatagata cagcccaaca aatgtatatg ccctcccctc
     1321 agtaaaattg gacaaaaata tgcacagcaa attgaaatac acatatacta ggaacaaaat
     1381 ttagttccat gtgccaaact gaatgaaatc tctgcatgtt tgcagcatat ctgccttttg
     1441 ggaatgtaat caaggtataa tctttggcta gtgttatgtg cctgtacttt aaaaaaatgg
     1501 tacaccagaa aaggactggc agtctactac catagtcaaa cttcacctta atttcgacat
     1561 gcttttggaa gcaggaagaa agctacaaaa ccagtatttg gtgccatgtg tgagcctggt
     1621 taaattggtc ttctaaaagc tgtcaattag gacattctgc gaaaggtaac atcacaactg
     1681 gttctgagta aaaccatcaa gtcaacagca gggtgcctga gataatcttt gaagcttatt
     1741 gtgctggcct gcaccagaag atatctgcat tctcattact aaaattgtag cacagaactg
     1801 cactaggatt tgtttacaag aagaaattaa aactctacgt ttggttttca catatagcag
     1861 ctctgttaaa taacatgcat ctgaatttta agttgcaaag gtatctgagc agttagtttt
     1921 tcatgtgcat cttttgttga atgttttggt tcaagaaaga atgtttaaag ctttttaaag
     1981 acttcagttc ttaatgtaac tgtacccttc tgcatggaaa atcataacca acatggctgc
     2041 agtagacttc tttagtggta tccagcacca cttgcagagg gctgctttat catattgtat
     2101 ttgggtgtag gactctagtg ttcttgggtg tattgcatgg gctgcattat ctacagcatt
     2161 gtacaataac aactagaaaa ggcagtatac ttcactgatg cttgtctggt aatatcactt
     2221 ctgtgttata atggaaggtt ttttgtgatg tatgaaactt gtgtttttta tatataaatg
     2281 agtatagtta gattagtgtt gtggtaatgc ctgttttcat ctgtaaatag ttaagtatgt
     2341 acacaaggca ctacttctga tttattgcag tgttcagtcc tagtttttct ttattaaaac
     2401 attcagtttt gcttcaattt tatgtacttt agttctaagt tagatttgca gatgtgtaca
     2461 gatagttcat atttatgtat tgcacataat catgctattc agcattgatg ctatattgta
     2521 ttatgtaaat aataaaagca gtgtacagag ggaaacttct tgttcattgg gtttttaagc
     2581 cttggacacc taaacagaga aaataggaaa gttttcatat tcaaatttat tagttaattt
     2641 catatagctt tgtactacaa agttattttg gcatggtcat tcttgaattc agtcacgtga
     2701 ataccatgag ctggtcatga atctttctca ggtgtggcat tatgataggc aaatttcgaa
     2761 gagtgagatg ggcaccatta atatgaagca gtcctaaaat ttgagaaagg aatgaaattt
     2821 aaataattgt tcatccctct cccctttttt ttttcctggt taaacaaccc tgaatggaga
     2881 tgtaggtgct taaacaaaaa acaattgctt tattccgtat gggtttggat ctagagagga
     2941 gaaaattaat tcaatgcaag tcttacactt agataagaaa taacatttaa atgctccaga
     3001 ctaaatgaag tcaagaataa aaccattgct tatcagagat gactagaaat agtgcaactc
     3061 ctgcctatcc acccttgagg attactactt gtagatgaag tataaatgtt ttacagaagt
     3121 ccatggtttg aacagtagta gtacccctca gttttgggta ttgcatccct tgagttgaaa
     3181 acaaggcatt taaaaggaga acttgttttt aaaatgacta ctcttcacaa gtgtcaacaa
     3241 atgcttcagt actttgccat ttttttttgt ttgttggact aaaccaagtc tcatgcatgt
     3301 taaaggaagt gctcttctga aggctgtgtg ggagtccctg ctctctcagt ttgtgaaagc
     3361 ttcagtagca agatattaca atagtgatag cataatcata ttttgggaca gagacttatg
     3421 tgggggtctt aaccctagtt cacagtgtag cccaagttag cctgttactt gtaatcctgc
     3481 cttagctaac ttccagggtg ctgagattat aggaatgagc tcttgactat tcaaatactc
     3541 atatacatag gaactttgaa gattttggtt tagataatct gtcaggaaca tcaaccaggg
     3601 agaatgattt caggaaggaa ccaaggaaga gttgagttct tcatagatgc ttggactcga
     3661 tgtgtgactc attccagact gataagtgct gtgcacattg aagttaagtt atgttacgta
     3721 actaggcaaa tctttgcgtg taatctaatg ggcctcatct gttaagcttg gacttctaac
     3781 ccagtgagtg gttaggagaa ggatgatttt gttttgtagt gctaaggatg aggtataggt
     3841 tgtcattgga caagtcactc cttaccacac tgccctgcct catttgttag gatgataata
     3901 aatacctaat tcaggaatgt ccagaaagca cttaagggtt cctgccacaa tacttactat
     3961 ttaatttctc aggatgaact ttagaacttg aaggaaacaa tgagtttggt tgcaaacctt
     4021 agaggctacg atctatagtt ttgtttttga ttttgaaacg gtctttcttg ctttgtaacc
     4081 caggctggtc ttgaactggt ggtaatcttg tcagtcttgg gactgcaatg caaggatgtg
     4141 ctaccatgta tggcagatgg gttgattttt gagactgcca actgtaagta gccaggctaa
     4201 tcttcgacga ctcctgcgtc agcactccaa agtgctgagt tacagatctg agctgtcatg
     4261 cctcacttaa gatctccaac ttgcacataa agtgatttga ggtgttgttc tgagttaggt
     4321 tttcttgaaa gatgtctaca ttaaagttcc tattaaccta aactggaaaa tgtctattaa
     4381 gatagcaaaa tgccaaaact atgtctggtt ttgtctttat gaatgctctt agggtttcaa
     4441 aatggctata tgaatgtatg aagtttcagc ttgttccgta cccacaacat gaaatgtgtg
     4501 cattttagtt cttgattttc tgtaaatacc tgcttattca tttagtgtta atgccatctg
     4561 tagtatcagg ttgtagctct ggagagggtt ggttagcatg gataacattg tgtacctgag
     4621 ggctggaaag gtaacttggc aactgagtgt gcttgttggt gctcttcctt aggaagtact
     4681 aacacttcct aaggaagtct agcttcgtgg gcactgcaca tgttgctacc aagcctatct
     4741 aacctgggtt tgatcctgag ggcctagaga gacttaacca ttgacttgta tgcaagcact
     4801 cccacacaat ataaaaacta aaacttgcag agtcctgttt tatattcctc cagactacat
     4861 ttctgtacaa gtaaaaatga gtttctgtag aataaatgta aatccatttt gatcacaaca
     4921 actaagtgat tctttttttt tgttagtaga gatgtattct tcacagaagt tatagccatg
     4981 gctgtaactt tccatgtaaa caaggctttt aattttgaga ttgaagttgt gagtgctggg
     5041 attaaaggtg tgagccacgt gagatacttg ttaataccaa gctgaagtaa attataggtt
     5101 actttaagta aattgatact cttgaatatt tctcctgatt tttgttttca tttgtcacag
     5161 aatttccaga ttgtagctag gcatatagga ttttgagctt ctaatcccag cactccagag
     5221 tcaggatttc agcaagttga gaccagcctg ggttgtataa cctagcccct ttaggatttg
     5281 aggttatttg tatctgggat ggtgaaattt tcaaagttga gccaagtgta ggaactatta
     5341 aaagacttca cataagcagt ctccatgtga gtgactacgt gtttctgtca gcactggctc
     5401 aaacactcat atttaaattt ctcaagtagc ctgtgtgtaa tgcccatggc aaacttaagt
     5461 tcactggcct ttattgcaca cttgtgtttt cttgtccctc catcgctaca gatcgattca
     5521 aacatgcagg tgatgatagt gcttgagact tcctgttgtg tcacatcttt caactcttat
     5581 gaaagcccta ggttttgttt ttataattct gtgtccacac ctatgagaaa agtactcacc
     5641 agaatagtat ttctcacctt ggacttaggc atctatctaa tacaactaca tagtatgcta
     5701 aatggctttg gggtaattat tactgtaaag ctattctgca gtaaaaacgt attaaagggt
     5761 ggttattctg cagattcatc agttgttagc tgtttgtgtc actcatacag agataaacta
     5821 aaatgcatgt ttttttagag tgccattttt agttctattt aacattcagt cgacatacag
     5881 attagattgt gttgaatatc tagggttaca acagttttaa cactcctaga ttatatcaga
     5941 tgagaaaaaa ggtgtcagat gatacctatt tgaaacacgt tcaatgtaca cattgcgttg
     6001 ttggcctggc ttttaagcat tggggtgata tctttgagtc tttaaatgag attaaggctt
     6061 tgtggtgaat taaagagtag tgtattcatt attacttaat gagctgtaac tagcaggcag
     6121 tgcacagtac aactggtgtt tctgctgtgt aaaacatcag gactgggatt caatactaag
     6181 aagattatac aagtaaatac tagacaaaaa ttataaaaga gggttatgct attacattcc
     6241 tggagtgcta gaaccagggt ataaaacaat attaacagta acgttacctt tatttaaccc
     6301 cctcatcagg ctctatcttc ccctcacatt ttgttcaaat atttcctaaa agattttctg
     6361 tggttttaac cagaatagta gtcatttaaa tttttactat ttcaaagcca tgtttttttt
     6421 ctttgttttg ttttgttttg ttttttaaat gtgattcttt caacacaatt tattcaattt
     6481 tatttaactt ctaccaggtc tggattaggc ttagcaaaat gcagtgtgtt gaagcgaaag
     6541 ttagaaatgg tgggaattcg cttaccctag ctagggaaca ggtcaagttc agactagagc
     6601 acccagcact tgatgctctt aaatgcctta ccttcttgga agggatggta atgcatggcc
     6661 attcccactt ggcctggaga taaaacagcc ttgagctaca gttactaaga gcagtgggag
     6721 caagttggtt aggctgagtt cccactatcc gacaggaaac aaaggctctg gtggataagt
     6781 ctgaggtagc ctacattaca tggccagagt ttttctggcc atcttctgga ttagggacga
     6841 tatttttaaa aagatctcta ttaaagtata tcagaaggga cactttatat ttattatata
     6901 ttatatattt atggttatta tagggctaat aaccaaaaaa ggaacatttt taaatttact
     6961 caaaatgctg ttaagtgaga aggtttgtac aatgttttaa attccttata caggagctgc
     7021 aatagaaatc taatggaagt atatatgtaa ttttaaactt cttgacaacc acatcctaac
     7081 aaaataaaaa gggtgaaatt
//
