LOCUS       NM_173332               3170 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus zinc finger AN1-type containing 4 (Zfand4), mRNA.
ACCESSION   NM_173332 XM_001054583 XM_001059788
VERSION     NM_173332.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3170)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000004.1.
            
            On Jan 3, 2023 this sequence version replaced NM_173332.2.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA5760383,
                              SAMEA5760389 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-94                JAXUCZ010000004.1  150999856-150999949
            95-394              JAXUCZ010000004.1  151009203-151009502
            395-470             JAXUCZ010000004.1  151031842-151031917
            471-538             JAXUCZ010000004.1  151032928-151032995
            539-725             JAXUCZ010000004.1  151035082-151035268
            726-873             JAXUCZ010000004.1  151048661-151048808
            874-2049            JAXUCZ010000004.1  151058306-151059481
            2050-2104           JAXUCZ010000004.1  151060009-151060063
            2105-2222           JAXUCZ010000004.1  151069865-151069982
            2223-3170           JAXUCZ010000004.1  151070995-151071942
FEATURES             Location/Qualifiers
     source          1..3170
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q42"
     gene            1..3170
                     /gene="Zfand4"
                     /gene_synonym="Anubl1; Rsd7"
                     /note="zinc finger AN1-type containing 4"
                     /db_xref="GeneID:286998"
                     /db_xref="RGD:628707"
     exon            1..94
                     /gene="Zfand4"
                     /gene_synonym="Anubl1; Rsd7"
                     /inference="alignment:Splign:2.1.0"
     exon            95..394
                     /gene="Zfand4"
                     /gene_synonym="Anubl1; Rsd7"
                     /inference="alignment:Splign:2.1.0"
     CDS             133..2358
                     /gene="Zfand4"
                     /gene_synonym="Anubl1; Rsd7"
                     /note="AN1-type zinc finger and ubiquitin
                     domain-containing protein 1; AN1, ubiquitin-like, homolog;
                     zinc finger, AN1-type domain 4"
                     /codon_start=1
                     /product="AN1-type zinc finger protein 4"
                     /protein_id="NP_775454.3"
                     /db_xref="GeneID:286998"
                     /db_xref="RGD:628707"
                     /translation="MFKADLGTIGIQLHTTYSRRIRKVKVMDNRKEPPFFNEDNVGPF
                     YFKLPFYDPMELFIETLTGTCFELRVSPFEAVISVKGKIQRLEGIPICQQHLIWNNME
                     LEDDYCLNDYNISEGCTLKLVLAMRGGPISTRKVPVEDPLRELAEYMDSSRDEVWEKT
                     SCNKQVTFLVYREGDQLNFFRVVDRGDGTLTPLSESLSGGSVYNLYTDEDEETEPSPS
                     GQQIIENSITMNKMKLLKAKMENMNLSKKPKKVVKVKPRPPIAPRPSSSSAAAARHRL
                     LRVLPHIGQSCLPSGNAYVPETSRNAGTSSAAQAPADRPMPSLRSELLKDDGNWERNM
                     LSHSTSSIRLLPQLTHLDLENDKELPDSVLHLGSSLPRRTKHLSGNLSSNNEEDVVLF
                     PRSEECVADELLLPEVGPFAPFAEGNGAEQSSGVEGLGKVTPEFPLTKGDGGLRAAEQ
                     PLSHMARVLSSDPGDNAVLNHHREPGSHKNRLLSPLLCVAPVSLHNSLVKPQRQSKCF
                     ESGNPSASTSQNTLRELDIRTIADSPFSRTARFRGVKVDSPGKRSDVISKVEARDITE
                     MANKASKEPVGCVNNNGFLASLARSASRDSLHSTRGVGRLRSSGIGLSTNFQHFQDEN
                     IRKSSPQSEPTDFFLSARGIGMNGSNAAAGKRIGESTHHLPPVKAPLQTKKKVTKHCF
                     LCGKKTGLATSFECRCGNNFCASHRYAEAHGCTYDYKSTGRRYLQEANPVVNAPKLPK
                     I"
     exon            395..470
                     /gene="Zfand4"
                     /gene_synonym="Anubl1; Rsd7"
                     /inference="alignment:Splign:2.1.0"
     exon            471..538
                     /gene="Zfand4"
                     /gene_synonym="Anubl1; Rsd7"
                     /inference="alignment:Splign:2.1.0"
     exon            539..725
                     /gene="Zfand4"
                     /gene_synonym="Anubl1; Rsd7"
                     /inference="alignment:Splign:2.1.0"
     exon            726..873
                     /gene="Zfand4"
                     /gene_synonym="Anubl1; Rsd7"
                     /inference="alignment:Splign:2.1.0"
     exon            874..2049
                     /gene="Zfand4"
                     /gene_synonym="Anubl1; Rsd7"
                     /inference="alignment:Splign:2.1.0"
     exon            2050..2104
                     /gene="Zfand4"
                     /gene_synonym="Anubl1; Rsd7"
                     /inference="alignment:Splign:2.1.0"
     exon            2105..2222
                     /gene="Zfand4"
                     /gene_synonym="Anubl1; Rsd7"
                     /inference="alignment:Splign:2.1.0"
     exon            2223..3170
                     /gene="Zfand4"
                     /gene_synonym="Anubl1; Rsd7"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agcgtcggcc ggcgtctcgg gcgcgcgcac tcctatcggc ctgcgggcag gcgagcgagc
       61 gagcgggcgg acgcgaccac cggagggcga gcgggtacaa aactcaaaca tgaacaacga
      121 tacatattac caatgttcaa agctgatttg ggtacaattg gaatacagtt gcatacaacc
      181 tattccagaa gaattagaaa agtcaaagta atggataaca gaaaagagcc tccattcttc
      241 aatgaggata acgtgggacc attttatttc aagcttcctt tctatgaccc catggagctc
      301 ttcatcgaga cgctgaccgg aacatgtttt gaactaagag tttcaccctt tgaagctgtt
      361 atctctgtga aaggaaaaat tcaaagattg gaaggtattc ccatctgtca gcagcactta
      421 atttggaata acatggagct tgaagatgat tattgcttga atgattacaa catttccgaa
      481 ggttgtacct tgaagctggt attggctatg cgtggcggac caataagtac tagaaaagtt
      541 cctgtggaag acccactcag ggagcttgct gagtacatgg attccagtcg agatgaggtc
      601 tgggaaaaga cctcttgcaa caaacaagtt acatttttgg tataccggga aggagatcaa
      661 ctaaatttct ttcgtgtagt agatagggga gatggcactt taacaccatt atcagaatct
      721 ttaagtggtg gctctgtata taatttgtac acagatgagg atgaagagac tgagccttct
      781 ccttctgggc aacaaatcat tgaaaattca ataactatga acaagatgaa gctgctgaag
      841 gctaagatgg agaacatgaa tctcagcaaa aagcctaaga aagttgtcaa ggtaaaacct
      901 cgcccaccca tagctcctcg gccatccagc agttctgcag cagcagcccg gcacagactg
      961 ttaagagtcc tccctcatat tgggcagtct tgtttgcctt ctgggaatgc atatgtccct
     1021 gaaacatcca ggaatgcagg cacaagctct gcagctcagg cccctgccga tagaccgatg
     1081 ccatctctca ggagtgagct gctgaaggat gatggtaact gggagagaaa catgctgtct
     1141 cactccacga gtagcatcag actgcttcct cagctgaccc acctagacct ggaaaacgac
     1201 aaagagcttc cagattctgt tcttcatctt ggatcatccc tgcctcggcg gaccaagcac
     1261 ctttcaggaa acttgtcatc taataatgag gaggatgttg tcttatttcc acggtcagaa
     1321 gaatgtgtag ctgacgagtt gctcctgcca gaagtaggtc cttttgctcc atttgcagaa
     1381 ggaaatggtg cggagcagag cagtggtgta gaagggttag ggaaggtaac accagagttc
     1441 ccactcacta aaggtgatgg aggactgagg gcagcagagc agcctctgag ccatatggca
     1501 agagtgctga gcagtgaccc aggagacaat gcagttctta accaccaccg agagccaggc
     1561 tctcacaaga acagactcct gtcacctctt ctctgtgttg caccagtgtc actacataat
     1621 tctctggtga agccacagag acagtcgaaa tgttttgagt caggcaaccc ctcagcgtct
     1681 acatcacaaa acaccctgcg ggaattggac attcgaacca tagcagattc tcctttctct
     1741 aggactgctc gcttccgtgg tgttaaagtc gattcgcctg ggaaaagatc tgatgttatt
     1801 tccaaagtgg aagcccgaga tattacagaa atggctaaca aagcttccaa agagcccgtt
     1861 ggttgtgtaa acaacaatgg ctttttggcc tcactggcac ggagtgcgag cagagacagt
     1921 ttgcatagca cgcgtggagt aggcaggctt cggtcctccg gaattgggtt gtctacaaac
     1981 ttccagcatt ttcaggatga aaacattagg aaaagttctc cccagtcaga acctacagat
     2041 ttttttctat ctgcccgtgg tattggaatg aatggaagta atgcagcagc agggaagaga
     2101 ataggagaaa gtactcacca ccttccacct gtgaaagccc ctcttcaaac aaagaagaaa
     2161 gtaacgaaac attgttttct ttgtggaaag aaaacaggac tggccactag ctttgaatgc
     2221 agatgtggaa acaacttctg tgcatctcat cgctatgcag aagctcatgg ctgcacttat
     2281 gactacaaaa gtacagggag gagatacttg caggaggcaa accctgtggt caacgcacca
     2341 aaacttccca aaatctaatt cttctctgcg ctttactgct ttgcctgagg aatcgattat
     2401 attgacagag aaatattgtt tagactgcat tatttttgtt cgactccaaa agatttgcca
     2461 aataacaagc gcacacagtg tgcactgttg gagactgaaa atgcctactg tattgatgtc
     2521 tttattcttt ggtgaatcaa aagttttaaa agtagtttta aaaactttac actataatga
     2581 tttagttttg ttattgcatg tctgtgttaa gtattttcta tttgagattg gaattattta
     2641 ttagacagat cttcaaagat gcactttagg aagttactat tggccgcata actaggcttc
     2701 cgtcttgtac agcaatgggt ggcttcgtaa tggctctgtt caaactgagc acattttgcc
     2761 cttttttctt ccttttcttg tggggatggg ataaatggga ttttttttta aatcctgcac
     2821 atgaaagttt atgaggttta ctagcacgtt ctttttaaaa gaacatttgt ttttccagtg
     2881 tgatttttaa cacatatatt tcttctatat tcagattggc attcatatat gtatccattc
     2941 tgtagaacac atcatgttaa tatagtatac atttttaaaa atactacttt ttaaatggta
     3001 gttttaaaat aacattgtct tccttgttgc cattgaaaac agaaaccaac ttttcaactt
     3061 ttcaaaaatg gctatagata tttttaaaag tctcacaaac ttggtttatt tttcttacat
     3121 attgagtgct tttacagggg aaattcaaat aaatattcaa cttcactatg
//
