LOCUS       NM_001100707            4193 bp    mRNA    linear   ROD 27-MAR-2024
DEFINITION  Rattus norvegicus zyg-11 related, cell cycle regulator (Zer1),
            mRNA.
ACCESSION   NM_001100707 XM_001065175 XM_001077108 XM_001077126 XM_242300
VERSION     NM_001100707.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4193)
  AUTHORS   Timms,R.T., Zhang,Z., Rhee,D.Y., Harper,J.W., Koren,I. and
            Elledge,S.J.
  TITLE     A glycine-specific N-degron pathway mediates the quality control of
            protein N-myristoylation
  JOURNAL   Science 365 (6448) (2019)
   PUBMED   31273098
REFERENCE   2  (bases 1 to 4193)
  AUTHORS   Vasudevan,S., Starostina,N.G. and Kipreos,E.T.
  TITLE     The Caenorhabditis elegans cell-cycle regulator ZYG-11 defines a
            conserved family of CUL-2 complex components
  JOURNAL   EMBO Rep 8 (3), 279-286 (2007)
   PUBMED   17304241
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000003.1.
            
            On or before May 13, 2010 this sequence version replaced
            XM_001077108.2, XM_001077126.2, XM_242300.5, XM_001065175.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMEA5760383, SAMEA5760389
                              [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-315               JAXUCZ010000003.1  33794934-33795248   c
            316-550             JAXUCZ010000003.1  33783283-33783517   c
            551-701             JAXUCZ010000003.1  33781186-33781336   c
            702-1138            JAXUCZ010000003.1  33780668-33781104   c
            1139-1354           JAXUCZ010000003.1  33780185-33780400   c
            1355-1469           JAXUCZ010000003.1  33778687-33778801   c
            1470-1616           JAXUCZ010000003.1  33778432-33778578   c
            1617-1790           JAXUCZ010000003.1  33777975-33778148   c
            1791-2006           JAXUCZ010000003.1  33774752-33774967   c
            2007-2048           JAXUCZ010000003.1  33773672-33773713   c
            2049-2168           JAXUCZ010000003.1  33773452-33773571   c
            2169-2284           JAXUCZ010000003.1  33772854-33772969   c
            2285-2473           JAXUCZ010000003.1  33772023-33772211   c
            2474-2571           JAXUCZ010000003.1  33771194-33771291   c
            2572-2674           JAXUCZ010000003.1  33770438-33770540   c
            2675-4193           JAXUCZ010000003.1  33767520-33769038   c
FEATURES             Location/Qualifiers
     source          1..4193
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3p12"
     gene            1..4193
                     /gene="Zer1"
                     /gene_synonym="RGD1310284; Zyg11bl"
                     /note="zyg-11 related, cell cycle regulator"
                     /db_xref="GeneID:311842"
                     /db_xref="RGD:1310284"
     exon            1..315
                     /gene="Zer1"
                     /gene_synonym="RGD1310284; Zyg11bl"
                     /inference="alignment:Splign:2.1.0"
     exon            316..550
                     /gene="Zer1"
                     /gene_synonym="RGD1310284; Zyg11bl"
                     /inference="alignment:Splign:2.1.0"
     CDS             393..2732
                     /gene="Zer1"
                     /gene_synonym="RGD1310284; Zyg11bl"
                     /note="zer-1 homolog"
                     /codon_start=1
                     /product="protein zer-1 homolog"
                     /protein_id="NP_001094177.1"
                     /db_xref="GeneID:311842"
                     /db_xref="RGD:1310284"
                     /translation="MASDTPESLMALCTDFCLRNLDGTLGYLLDKETLRLHPDIFLPS
                     EICDQLVNEYVELVSAACTFEPHETFFSLFSDPRSTRLTRIHLREDLVQDQDLEAIRK
                     QDLVELYLTNCEKLSAKSLQTLRSFSHSLVSLSLFGCANIFYEEDNPGGCEDECLVNP
                     TCQVLVKDFTFEGFSRLRFLNLGRMIDGIPVESLLRPLNSLTALDLSGIQTSDATFLT
                     QWKDSLMSLVLYNMDLSDDHIRVIVQLHKLRSKILTCGHHLTSSHLDISRDRLSSYYK
                     FKLTRKVLSLLVQKLGNLMSLDISGHMILENCSISKTDEEAGQTSTEPSKSSIMPFRA
                     LKRPLQFLGLFETSLCRLTHIPAYKVSGDKNEEQVLNAIEAYTEHRPEITSRAINLLF
                     DIARIERCNQLLRALKLVITALKCHKYDKNIQVTGSAALFYLTNSEYRSEQSVKLRRQ
                     VIQVVLNGMESYQEVTVQRNCCLTLCNFSIPEELEFQYRRVNELLLGILSPTRQDESI
                     QRIAVHLCNALVCQVDNDHKEAVGKMGFVVTMLKLIQKKLLDKTCDQVMEFSWSALWN
                     ITDETPDNCEMFLNFNGMKLFLDCLKEFPEKQELHRNMLGLLGNVAEVKGLRPQLMTS
                     QFISVFSNLLESKADGIEVSYNACGVLSHIMFDGPEAWGVCEPQRAEVEERMWAAIQS
                     WDINSRRNINYRSFEPILRLLPQGISPVSQHWATWALYNLVSVYPDKYCPLLIKEGGM
                     PLLRDLIKMVTARQETKEMARKVIEHCSNFREENMDTSR"
     exon            551..701
                     /gene="Zer1"
                     /gene_synonym="RGD1310284; Zyg11bl"
                     /inference="alignment:Splign:2.1.0"
     exon            702..1138
                     /gene="Zer1"
                     /gene_synonym="RGD1310284; Zyg11bl"
                     /inference="alignment:Splign:2.1.0"
     exon            1139..1354
                     /gene="Zer1"
                     /gene_synonym="RGD1310284; Zyg11bl"
                     /inference="alignment:Splign:2.1.0"
     exon            1355..1469
                     /gene="Zer1"
                     /gene_synonym="RGD1310284; Zyg11bl"
                     /inference="alignment:Splign:2.1.0"
     exon            1470..1616
                     /gene="Zer1"
                     /gene_synonym="RGD1310284; Zyg11bl"
                     /inference="alignment:Splign:2.1.0"
     exon            1617..1790
                     /gene="Zer1"
                     /gene_synonym="RGD1310284; Zyg11bl"
                     /inference="alignment:Splign:2.1.0"
     exon            1791..2006
                     /gene="Zer1"
                     /gene_synonym="RGD1310284; Zyg11bl"
                     /inference="alignment:Splign:2.1.0"
     exon            2007..2048
                     /gene="Zer1"
                     /gene_synonym="RGD1310284; Zyg11bl"
                     /inference="alignment:Splign:2.1.0"
     exon            2049..2168
                     /gene="Zer1"
                     /gene_synonym="RGD1310284; Zyg11bl"
                     /inference="alignment:Splign:2.1.0"
     exon            2169..2284
                     /gene="Zer1"
                     /gene_synonym="RGD1310284; Zyg11bl"
                     /inference="alignment:Splign:2.1.0"
     exon            2285..2473
                     /gene="Zer1"
                     /gene_synonym="RGD1310284; Zyg11bl"
                     /inference="alignment:Splign:2.1.0"
     exon            2474..2571
                     /gene="Zer1"
                     /gene_synonym="RGD1310284; Zyg11bl"
                     /inference="alignment:Splign:2.1.0"
     exon            2572..2674
                     /gene="Zer1"
                     /gene_synonym="RGD1310284; Zyg11bl"
                     /inference="alignment:Splign:2.1.0"
     exon            2675..4193
                     /gene="Zer1"
                     /gene_synonym="RGD1310284; Zyg11bl"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggaagtgacg ctttgttgac agcacacccg cagccacagg ctctccaagc cgtcggagca
       61 ggatcggggg gaggggctgg gcccggagcc agcagccggc ggccctcagc ccagccggcg
      121 gcccgagggc aagggaacgg cctccgttcc gggctctagt cgcagctttc ctgccctgcc
      181 ccgccccgct gacccggacc gagatcggat ccgacctcct gcggcgcatt ggccgcggat
      241 tcccccgggc cgcagcctcc gcttgtaagc ctgcgaagca tcctgtctcc ccgttgaggg
      301 ccgccccctc ctagggctgc ggctctgcca atgatcttgt gactattgga gtccatagtt
      361 gcccttgtgg gcccttgctg ccttctcccg acatggcgtc tgacacaccc gagtccctca
      421 tggccctctg tactgacttc tgtctccgga atctcgatgg caccctgggc tacctgctgg
      481 acaaggagac cctgcggctg catccagaca tcttcttgcc tagtgaaatc tgtgaccagc
      541 tggtcaatga gtatgtggag ctggtcagtg cggcctgcac tttcgaacca catgagacct
      601 tcttcagcct cttctcagac ccccgcagca cgcggctcac tcgcatccac ctccgtgagg
      661 acctggtgca agaccaggac ctggaagcga ttcgaaagca ggacctggtg gagctgtacc
      721 tgaccaactg cgagaagctg tccgccaaga gcctgcagac gctgcggagc ttcagccaca
      781 gtctggtgtc cttgagcctc ttcggatgtg ccaacatctt ctacgaggag gacaacccgg
      841 gcggctgtga ggatgagtgc ctggtcaacc ccacctgcca ggtgctggtc aaggacttca
      901 cctttgaggg cttcagccgc ctgcgcttcc tcaacctggg ccgcatgatc gacggcatcc
      961 ccgtggagtc actgcttcgg ccactcaact ccctgactgc cttggacctc tcaggcatcc
     1021 agacaagcga cgccactttc ctaacacagt ggaaggacag tctgatgtcc cttgtgctct
     1081 acaacatgga cctttcagac gaccacatcc gtgtcattgt ccagctgcac aagctgcgga
     1141 gtaagatcct gacctgtggc caccacctga cctccagcca cctggacatc tcccgagacc
     1201 gcctctccag ctactacaag ttcaagctga ctcggaaggt gctcagcctc ctggtgcaga
     1261 agctggggaa tctgatgtca ctagacatct ctggtcacat gatcctggag aactgcagca
     1321 tctccaagac agatgaggag gcagggcaga ccagcaccga gccatccaag agcagcatca
     1381 tgccttttcg ggctctgaag aggccactgc agttccttgg gctctttgag acctccttgt
     1441 gtcgtctcac acacattcca gcctacaaag taagtggtga caaaaatgaa gagcaggtgc
     1501 tgaacgccat cgaggcctac acagagcacc ggcctgagat cacttccagg gccatcaacc
     1561 tgctgtttga cattgcacgc attgaacgct gcaaccagct tctgcgcgcc ctgaagctgg
     1621 tcatcacagc cctcaagtgt cacaagtatg acaagaacat tcaagtgact ggcagtgccg
     1681 ctctcttcta cctgaccaac tctgagtacc gctcagagca gagcgtcaag ctgcgccggc
     1741 aggtcatcca ggtggtgctg aatggcatgg agtcctacca ggaggtgacg gtgcagcgga
     1801 actgctgtct gaccctctgc aacttcagca tccccgagga gctggagttc cagtaccgcc
     1861 gcgtgaacga gctcctgctt ggcatcctca gccccacccg ccaggacgag tcgatccagc
     1921 gtatcgctgt gcacttgtgc aatgccctcg tctgccaggt ggacaatgat cacaaggagg
     1981 ctgtgggcaa gatgggcttc gtcgtgacca tgttgaagct gatccagaag aagctgctgg
     2041 acaagacgtg tgaccaggtc atggagttct cctggagcgc tctgtggaac atcacggatg
     2101 agactccaga caactgtgag atgttcctta acttcaacgg catgaagctc tttctcgact
     2161 gcctgaagga gttcccagag aagcaggagc tacaccggaa catgctcggg ctcttgggga
     2221 atgtggcaga ggtgaagggg ctgcggcctc agctgatgac ctctcagttc atcagcgtct
     2281 tcagcaacct gctggaaagc aaggccgatg gcattgaggt ttcttacaat gcctgtggtg
     2341 tcctatccca catcatgttt gatgggcctg aagcctgggg tgtctgtgaa ccccagcggg
     2401 cagaggtgga ggagcgtatg tgggcggcca tccagagctg ggatatcaac tcccgaagga
     2461 atatcaacta caggtccttt gagccgatcc tccgcctcct tccccagggc atctctccag
     2521 tcagccagca ctgggccacc tgggccctgt acaacctcgt gtctgtctac cctgacaagt
     2581 actgccccct gctgattaag gaaggcggga tgcccctgct gagggacttg atcaagatgg
     2641 ttactgcccg gcaggaaacc aaggagatgg cccgcaaggt gattgagcac tgcagtaact
     2701 ttagagagga gaacatggac acgtccagat agaggccaca cagctcggac cacaggccgg
     2761 gaggaagcgc tggaggtcta gtgggcaggt cccttgcgga gcctcccaca gggtgaagag
     2821 acagcgagga cttttgcaca gccgacgcgg ttccttaatg ttagtgagat atatatatta
     2881 tatatatatt attatttttt ttttggttag gaagtgtgaa gttttgtgtg tatgacttct
     2941 cccgagtctt tgcagctcct tgccactctc atccacctcc aagctttcgt tgctgccatg
     3001 ttccctcctg ccccagctgg gcttgcctct aatgctgtga gtgcctggtc ccttcccagt
     3061 gagctcagac cctggcctgc cttctgtctg ttgtgggcgg agctggccct taccaggctg
     3121 ctcgacatcc ttgatccccg cctgagtgcc ctgtgcaggc tcccaggtga gtgaggctgc
     3181 tgaggtctgg gattaagtcc agccctactg ggtttcccag ctttggtgct ccaggctgtg
     3241 agccatctgg ggccaaaaga gtaagctgtt cccagcctta gaccaagcgg ctcctgtccc
     3301 gaggaccctg gagaagcatg gctctgttgg ccactgctct ctggccaggc ctgtctgtgg
     3361 ccatgctgct atggaggctg cctcaagtct ccctcaggcc ccaggctttt gaaggttcca
     3421 gcccagagat ggccagaact caggggcaat tccactgccc cttctgccaa acatgcccca
     3481 ggccacctca actctggcag ctggcacctt ccgggaccag ggtcttgctc cttgttctgt
     3541 agccctcatc tacccacagc accccagtgc ccaggcactc ccaccagcag cagagctgag
     3601 cccacccgct gtccagaaga tactacagct ccctccaagg caggagttcc ccactccagc
     3661 ctcacagtgg cagcaggaaa ccaccttcag accagcatgt ggacagtcct ctgtccctcc
     3721 agcccagtca ggctgccctg agaagctgca ctgtggtgta ggctctcggg gcatccgtgc
     3781 acccatcatt gtgtctctgc attgcctttc attggtacag gtactcagga gacctgtgca
     3841 cagcaggcgt agggagcaaa gctggccccg gaggcagcct ctggtgtggc tttttctgcc
     3901 ctctttcttc tctgtgcctg tttgtttccg ggcttacctg cctacagtca gaaggggccc
     3961 agctgttcac aggactcggg gagaggcaac tgaccttccc agaggaaact ttccctggca
     4021 ggtggcttcc cccatgcagc acttgggcaa cctcagcctg ccctttccat cccacgccct
     4081 ctggcactgc caggccctga gcagagctgt catccactgc tttaccacct gggtctgggg
     4141 aaatgtctgt acttcaggat gtcacagaaa tacattttgt gcaaagtgca aaa
//
