LOCUS       NM_001039016            2899 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus zinc finger DHHC-type palmitoyltransferase 9
            (Zdhhc9), mRNA.
ACCESSION   NM_001039016
VERSION     NM_001039016.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2899)
  AUTHORS   Ohno Y, Kashio A, Ogata R, Ishitomi A, Yamazaki Y and Kihara A.
  TITLE     Analysis of substrate specificity of human DHHC protein
            acyltransferases using a yeast expression system
  JOURNAL   Mol Biol Cell 23 (23), 4543-4551 (2012)
   PUBMED   23034182
REFERENCE   2  (bases 1 to 2899)
  AUTHORS   Ohno Y, Kihara A, Sano T and Igarashi Y.
  TITLE     Intracellular localization and tissue-specific distribution of
            human and yeast DHHC cysteine-rich domain-containing proteins
  JOURNAL   Biochim Biophys Acta 1761 (4), 474-483 (2006)
   PUBMED   16647879
REFERENCE   3  (bases 1 to 2899)
  AUTHORS   Swarthout JT, Lobo S, Farh L, Croke MR, Greentree WK, Deschenes RJ
            and Linder ME.
  TITLE     DHHC9 and GCP16 constitute a human protein fatty acyltransferase
            with specificity for H- and N-Ras
  JOURNAL   J Biol Chem 280 (35), 31141-31148 (2005)
   PUBMED   16000296
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC129070.1.
            
            On Jan 14, 2007 this sequence version replaced NM_001039016.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC129070.1, AY886526.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMD00132261,
                                           SAMD00132262 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2899
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq36"
     gene            1..2899
                     /gene="Zdhhc9"
                     /note="zinc finger DHHC-type palmitoyltransferase 9"
                     /db_xref="GeneID:302808"
                     /db_xref="RGD:1561389"
     exon            1..170
                     /gene="Zdhhc9"
                     /inference="alignment:Splign:2.1.0"
     exon            171..455
                     /gene="Zdhhc9"
                     /inference="alignment:Splign:2.1.0"
     CDS             289..1383
                     /gene="Zdhhc9"
                     /EC_number="2.3.1.225"
                     /note="membrane-associated DHHC9 zinc finger protein; zinc
                     finger, DHHC domain containing 9; zinc finger, DHHC-type
                     containing 9"
                     /codon_start=1
                     /product="palmitoyltransferase ZDHHC9"
                     /protein_id="NP_001034105.2"
                     /db_xref="GeneID:302808"
                     /db_xref="RGD:1561389"
                     /translation="MSVMVIRKKVTRKWEKLPGRNTFCCDGRVMMARQKGIFYLTLFL
                     ILGTCTLFFAFECRYLAVQLSPAIPVFAAMLFLFSMATLLRTSFSDPGVIPRALPDEA
                     AFIEMEIEATNGAVPQGQRPPPRIKNFQINNQIVKLKYCYTCKIFRPPRASHCSICDN
                     CVERFDHHCPWVGNCVGKRNYRYFYLFILSLSLLTIYVFAFNIVYVALKSLKIGFLET
                     LKETPGTVLEVLICFFTLWSVVGLTGFHTFLVALNQTTNEDIKGSWTGKNRVQNPYSH
                     GNIVKNCCEVLCGPLPPSVLDRRGILPLEESGSRPPSTQETSSSLLPQSPASTDHMNS
                     NETPEDSSTPEEMPPPEPPEPPQEATEAEK"
     exon            456..616
                     /gene="Zdhhc9"
                     /inference="alignment:Splign:2.1.0"
     exon            617..775
                     /gene="Zdhhc9"
                     /inference="alignment:Splign:2.1.0"
     exon            776..913
                     /gene="Zdhhc9"
                     /inference="alignment:Splign:2.1.0"
     exon            914..962
                     /gene="Zdhhc9"
                     /inference="alignment:Splign:2.1.0"
     exon            963..1065
                     /gene="Zdhhc9"
                     /inference="alignment:Splign:2.1.0"
     exon            1066..1169
                     /gene="Zdhhc9"
                     /inference="alignment:Splign:2.1.0"
     exon            1170..1266
                     /gene="Zdhhc9"
                     /inference="alignment:Splign:2.1.0"
     exon            1267..2875
                     /gene="Zdhhc9"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcggttgcca cagctggttt agggccccga ccattggggc cccttgtcag gaggaggcac
       61 cctccctgtc agggagaagt cgctaccacc tttggctgct gacgggattc ccccgggaca
      121 gtgcactttc tgccctcagt tgccagccga gttcagtgtc ccttgttcag ggctcttgat
      181 aatgtttggc ccagcggcaa caatagtaga cgacttgatt ttcaagctca gcctctgcgt
      241 cttctcttga gtagtcacga agcccatctt ggaccaggaa ctccaatcat gtctgtgatg
      301 gtgataagaa agaaggtgac aaggaagtgg gagaaactcc cgggcaggaa taccttctgc
      361 tgtgatggcc gcgtcatgat ggcccggcaa aagggcatct tctacttgac cctcttcctc
      421 atcctgggga cgtgcacact cttctttgcc ttcgagtgtc gctatctggc tgtccagctg
      481 tctcctgcca tccctgtgtt tgctgctatg ctctttcttt tctctatggc cacactcttg
      541 aggaccagtt tcagtgaccc tggagtgatc cctcgagcac taccagatga agcagctttc
      601 atagaaatgg aaatagaagc caccaatggt gccgtgccac agggccagag accacctcct
      661 cgtattaaga atttccagat aaacaaccag attgtgaaac tgaaatactg ttatacatgc
      721 aagatcttcc ggcctcccag ggcctcccat tgtagcatct gtgacaactg tgtggagcgc
      781 ttcgaccatc actgcccctg ggtgggaaac tgtgttggaa agaggaacta ccgctacttc
      841 tacctcttca tcctctctct ctccctcctc acaatttatg tcttcgcctt taacatcgtc
      901 tatgtggccc tcaaatcctt gaaaattggc ttcctggaga cattgaaaga aactcctgga
      961 actgttctgg aagtcctcat ttgcttcttc actctctggt ctgttgtggg gctgactgga
     1021 tttcacactt tccttgtggc tctcaaccag actaccaatg aagacatcaa aggatcgtgg
     1081 acagggaaga accgtgtgca gaatccgtac agtcatggaa acattgtgaa gaactgctgt
     1141 gaagtgcttt gtggcccctt gcccccaagt gtcctggatc ggaggggtat tttgccactg
     1201 gaggaaagtg gaagtcgacc tccaagtact caagagacca gcagtagcct cttgccacag
     1261 agcccagcct caacagatca tatgaactct aatgagacgc ctgaggacag cagcactcct
     1321 gaagagatgc cacctccaga gccgccagag ccaccacagg aggcaaccga agctgagaag
     1381 tagcctctct atggaagaga cttttgtttg tgtttcatta gggctatgag agatttcagg
     1441 ggagacgatc aacctgagac agagagcaaa taagctgtcc cttattacgg tttttctttg
     1501 gtctttagtc acccaattac acactggcat tttcttgctg caaacttttt ttttaatgtt
     1561 tggacttaag acagtggcag aagatgccag tcacattggt aactggacaa atgggtctct
     1621 tgggacatgg cactggtttc ccattgtctc agccacaagg tgtccttgga ctccccttct
     1681 cttccctcca gatcctagct ctcctgctgg cggtcattgg cctctttttg ggggctaaag
     1741 agcctcaagg ctgactcaag tcctttccag ctgctgcctg tcccaaatcc agaggcagtc
     1801 acagagacct ctggccaggg aatcctaact gggctcttga ctccttcaga actaatgagg
     1861 cttggagagg ggtgctggag gattctcctg gctccaaagt gccagcattg ccagccaatc
     1921 ccattaggaa tagggcaggt accttccact tgtatttatt tctgtagctt ctcttttctc
     1981 cctgcccctc atctactttc taacatccaa gtcccactct ttccccccat tagatgctat
     2041 agataagtag tcatggtaga aataatacat ttctcatagg ttctccagaa acttcaatgc
     2101 ttgtgctgtt ctcaataagc attgatgaga tgccaacaat acagcccctc acactctctg
     2161 tctcatctcc cctctttgct cattagtcca ctttcatttt ctccttttga ctcctgcttc
     2221 cactgggagc aggactggca ggaataaaag tctgcacttt gctggttcct tttcctcagg
     2281 ggaagcctga gtgctcactt aaacactacc cctcagactt cttgtgtaag gcctacagag
     2341 gccatgaatg cacaaatggg gaagccaagg cacagagagg ctctcctctc ctctccactc
     2401 ttctcctctc ctctcctctc ctctaccctc ctctcccctc ctctccctct tcatcccctc
     2461 aaaaaagaga gagagaaagg ctagacagta cttccattaa gccttggctg agtgagggaa
     2521 agcccagcac tgctgccctc ccgggtatcc cactccaagg cctcagccca cctctggcaa
     2581 tggtaaccac accaggggct tcatccaagc ccctactctt ccagcacttc caccggcaga
     2641 gtccaagagc cacttcatcc tgggggtgga ctgtagcccc ccaggctgct ctgctcagga
     2701 cctgcgctac ttcagggaag aagatctatg tattatatgt ggctatattt cctagagcac
     2761 ctgtgttttt ctctttctaa gccagggtct tgtctggatg acttacgggg acagggaggg
     2821 gtgcaaacca cgacttttaa tctatttgaa ggtgattaaa ctgtgtctaa tgcaaaaaaa
     2881 aaaaaaaaaa aaaaaaaaa
//
