LOCUS       NM_001039259            1523 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus zinc finger DHHC-type palmitoyltransferase 19
            (Zdhhc19), mRNA.
ACCESSION   NM_001039259 XM_237834 XM_573300
VERSION     NM_001039259.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1523)
  AUTHORS   Baumgart,F., Corral-Escariz,M., Perez-Gil,J. and
            Rodriguez-Crespo,I.
  TITLE     Palmitoylation of R-Ras by human DHHC19, a palmitoyl transferase
            with a CaaX box
  JOURNAL   Biochim Biophys Acta 1798 (3), 592-604 (2010)
   PUBMED   20074548
REFERENCE   2  (bases 1 to 1523)
  AUTHORS   Ohno,Y., Kihara,A., Sano,T. and Igarashi,Y.
  TITLE     Intracellular localization and tissue-specific distribution of
            human and yeast DHHC cysteine-rich domain-containing proteins
  JOURNAL   Biochim Biophys Acta 1761 (4), 474-483 (2006)
   PUBMED   16647879
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000011.1.
            
            On Nov 27, 2020 this sequence version replaced NM_001039259.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AY886535.1, BC127441.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-351               JAXUCZ010000011.1  81793658-81794008   c
            352-485             JAXUCZ010000011.1  81792892-81793025   c
            486-607             JAXUCZ010000011.1  81792444-81792565   c
            608-747             JAXUCZ010000011.1  81791821-81791960   c
            748-920             JAXUCZ010000011.1  81790849-81791021   c
            921-1026            JAXUCZ010000011.1  81790430-81790535   c
            1027-1112           JAXUCZ010000011.1  81784074-81784159   c
            1113-1339           JAXUCZ010000011.1  81783544-81783770   c
            1340-1523           JAXUCZ010000011.1  81782903-81783086   c
FEATURES             Location/Qualifiers
     source          1..1523
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="11"
                     /map="11q22"
     gene            1..1523
                     /gene="Zdhhc19"
                     /gene_synonym="RGD1560310"
                     /note="zinc finger DHHC-type palmitoyltransferase 19"
                     /db_xref="GeneID:288045"
                     /db_xref="RGD:1309014"
     exon            1..351
                     /gene="Zdhhc19"
                     /gene_synonym="RGD1560310"
                     /inference="alignment:Splign:2.1.0"
     CDS             331..1410
                     /gene="Zdhhc19"
                     /gene_synonym="RGD1560310"
                     /EC_number="2.3.1.225"
                     /note="membrane-associated DHHC19 zinc finger protein;
                     zinc finger, DHHC domain containing 19; probable
                     palmitoyltransferase ZDHHC19; zinc finger, DHHC-type
                     containing 19"
                     /codon_start=1
                     /product="palmitoyltransferase ZDHHC19"
                     /protein_id="NP_001034348.1"
                     /db_xref="GeneID:288045"
                     /db_xref="RGD:1309014"
                     /translation="MTSHPLPDDAVTPVKEPQQLPEIPLSWFFPSLFAAFNVSLLVFL
                     SGLFFGFPCRWLVQNGEWVFPAVTGPLFILTFFSLVSLNFSDPGILHRGSVSEDPRTV
                     HVVRVNQRAFRLEWCPKCLFHRPPRTYHCPWCNICVEDFDHHCKWVNNCIGHRNFRLF
                     VLLILFLCLYSGALLVTCLMFLIHTSHLPFSLDKAMAILVAVPAAGFLIPLFLLMLIQ
                     ALSVSRAERSYESKCRDHEEYNPFDQGFAKNWYLTMCAPLGPNYMSEVVCLQRPVGTE
                     RIQEKTKHPPPCPPKPCGPGHPGPQIQPRHTRGKGPPGSGEAAALQEMRSLPASVEKS
                     PGGPRQPMAESADEAHPGTHRARTT"
     exon            352..485
                     /gene="Zdhhc19"
                     /gene_synonym="RGD1560310"
                     /inference="alignment:Splign:2.1.0"
     exon            486..607
                     /gene="Zdhhc19"
                     /gene_synonym="RGD1560310"
                     /inference="alignment:Splign:2.1.0"
     exon            608..747
                     /gene="Zdhhc19"
                     /gene_synonym="RGD1560310"
                     /inference="alignment:Splign:2.1.0"
     exon            748..920
                     /gene="Zdhhc19"
                     /gene_synonym="RGD1560310"
                     /inference="alignment:Splign:2.1.0"
     exon            921..1026
                     /gene="Zdhhc19"
                     /gene_synonym="RGD1560310"
                     /inference="alignment:Splign:2.1.0"
     exon            1027..1112
                     /gene="Zdhhc19"
                     /gene_synonym="RGD1560310"
                     /inference="alignment:Splign:2.1.0"
     exon            1113..1339
                     /gene="Zdhhc19"
                     /gene_synonym="RGD1560310"
                     /inference="alignment:Splign:2.1.0"
     exon            1340..1523
                     /gene="Zdhhc19"
                     /gene_synonym="RGD1560310"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gaagacttca cataaatccc tctgagactc agtatctttg ctaacccctc tcttaacgtc
       61 tccggcacac caacagggct cagtacgtga atttctgggg gatgaacccc agcagcctcc
      121 aaggaggcac agctgaggct ccttggactc tggcataagt gatggggagg aggagatggt
      181 caatatcgaa agtgaccaga agtagccaga gccaccgtcc ctctacctct gtgacatcac
      241 actgagatct cttttttcct ctctcctggg ctgtggcttc tgttgctatg gcaatgaaat
      301 tctgagtcct taagggagag agcagctaga atgacgtctc atcccctacc tgatgacgct
      361 gtgacccctg tgaaggaacc acaacagctg cccgagatcc ctctttcatg gttcttcccg
      421 agcctgtttg ctgccttcaa tgtatctctg ctggtgttct tgagtggcct tttcttcgga
      481 tttccttgta ggtggctggt tcagaacggg gagtgggtct ttcccgcggt cacaggacca
      541 ctcttcatcc tcaccttctt cagtctcgtc tcgctcaatt tctcagaccc gggtatctta
      601 catcgaggct ccgtcagtga ggatcccagg accgtgcatg tggtgcgagt gaaccaaagg
      661 gctttccgcc tggaatggtg cccaaagtgc ctcttccatc gcccgccccg tacctaccac
      721 tgcccatggt gcaacatttg tgtcgaggac tttgaccacc attgcaaatg ggtcaacaac
      781 tgcatcggtc accgcaactt ccgcctcttc gtgctgctga tcctgttcct ctgtctctac
      841 tctggagccc tgctggtcac ctgcctgatg ttcctaattc acacgagcca tctgcccttc
      901 tccctggaca aggcgatggc catcctggtg gctgtgcccg ctgcgggctt cctgattcca
      961 ctcttcctgc tgatgctgat ccaggcccta tctgtgagca gggcggagcg ctcctacgag
     1021 agcaagtgca gggaccatga ggaatacaac ccctttgacc agggctttgc caagaactgg
     1081 tatctaacaa tgtgtgcacc actgggtccc aattacatgt ctgaagttgt ctgtctgcaa
     1141 agaccggtgg ggacagaacg aatccaggag aagactaaac acccaccacc gtgtcctccc
     1201 aaaccttgtg gcccaggtca tcctgggcca cagatccaac ctcggcacac acgagggaag
     1261 ggacccccag ggagtggcga ggctgcagct ctccaggaga tgagaagcct acctgcatct
     1321 gtggaaaagt ccccaggagg tccacgccaa cccatggctg aatctgctga tgaggctcac
     1381 cccggtactc acagagccag gaccacctga acttgcgcct ccgagtttga atccgagtgg
     1441 tccacttggg cccagcccct gtttcactgg tgggagcact gacacccacc aatcctcatt
     1501 aaatattgat tgacggtttc tga
//
