LOCUS       XM_039082848            1676 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger CW-type and PWWP domain
            containing 2 (Zcwpw2), transcript variant X4, mRNA.
ACCESSION   XM_039082848
VERSION     XM_039082848.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051343.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039082848.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1676
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1676
                     /gene="Zcwpw2"
                     /note="zinc finger CW-type and PWWP domain containing 2;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 3 ESTs, 3 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 63 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:681381"
                     /db_xref="RGD:1596709"
     CDS             208..1224
                     /gene="Zcwpw2"
                     /codon_start=1
                     /product="zinc finger CW-type PWWP domain protein 2
                     isoform X1"
                     /protein_id="XP_038938776.1"
                     /db_xref="GeneID:681381"
                     /db_xref="RGD:1596709"
                     /translation="MVSATSPMDPALGSSEFVNTMWVQCENESCLKWRLLSPAAAARV
                     DLGEPWFCSMNADSSYNSCAASEQDFPEESQLLESGYKIVYSQLPLGSLVLVKLQNWP
                     SWPGILCPDPFKGNYVTYDRDGNVDKYYIEFLGHPRSTAWISAAFVGHFSLTLKTAEC
                     KNKKRWYRSALEEAYRLYRCSPEQRLAVCCRPTRDRTRRGTEAPVVTKERIQGSKNNT
                     EKKRPRVRKRKRDAALKYSVDIFCSDEALSKENMVVSETEGLLKELEKMLQQVQEPTA
                     REDGPGLEQLSQCSLEAPTGSPFESCHEEDCIVSDWTGLKAGECIETVTNGLKMIEAL
                     ISEF"
ORIGIN      
        1 gcgtcgcgcc cagccgcggg gaggcggagt ggagctgaga aagcgtcgca ggcctgcggc
       61 tgttgggctg aggctcgcgt tcagggcgcc ctctagcgcg tcctttccac tcagcggcca
      121 ctcggattcc gtgagatttg attcacttct gagaaacaaa acaaagacaa agcgaagtca
      181 aatgaaataa agcagcaagt tagctgaatg gtcagtgcca ccagcccaat ggacccggcc
      241 ctggggagca gcgagtttgt gaacacaatg tgggtacagt gtgagaatga aagctgcttg
      301 aagtggaggc tgctgtcccc tgcggctgca gccagggtgg acctgggtga gccctggttc
      361 tgctccatga atgctgactc cagctacaac agctgtgcgg cttctgagca ggacttccct
      421 gaagaatcgc agctcctcga aagtgggtat aagatcgtct actcacagct tcctctcgga
      481 agcctggttc tggtaaaact gcagaactgg ccaagttggc caggaatcct ttgtcctgat
      541 cctttcaaag ggaactatgt aacctatgac cgggatggaa atgttgataa gtattacata
      601 gagtttctgg gccacccccg ctcaacagca tggataagcg cagcgttcgt tggacatttt
      661 agcctcacgt taaagacggc agaatgtaag aataagaaga ggtggtatag aagtgccctc
      721 gaggaagcgt accgactcta caggtgttca ccagagcaaa gactagcagt gtgctgccga
      781 ccaacgcggg acagaaccag aagaggcaca gaagctcctg tggtgaccaa ggaaaggatt
      841 caaggttcta aaaataatac tgaaaagaaa aggcccaggg ttagaaagag gaaaagggat
      901 gctgctttaa agtactctgt tgacattttt tgttccgatg aagccctgtc aaaggaaaac
      961 atggttgtct ccgagacaga aggtttgctg aaagaactgg agaaaatgct gcagcaagta
     1021 caggagccca cggcaagaga ggacgggcca gggctcgagc agttgtctca gtgcagcctg
     1081 gaagctccga caggcagtcc atttgagagt tgccatgaag aggactgtat tgtgtctgac
     1141 tggacaggac ttaaagctgg ggaatgtatt gagactgtaa ctaacggttt aaaaatgata
     1201 gaagccctaa tatctgaatt ttagggtggt acccaaaagt taattataaa aacagtcaca
     1261 gtctttatat tttgttttca aatatcttaa aatgtttaat gaattaggga taaaaattgg
     1321 tatttgttat aaattttact ttgtgaatgt ccatgactgt gggagtgtat caaatggcat
     1381 taagttataa ttaggattaa aaaatcttta tgtttgtatt tgtaaacttt ttgtttgctt
     1441 ttattttaca gttgtttatg aaacttaatc gtaaacaagt gctatacatg agtgtttcac
     1501 ccttctttaa atatgactat tggaatggct acctgttctg ttaacaagtt tcagtgagaa
     1561 ctcaaatgta acacatgtac aaagtgtttt tgtagttcga tggaactttt aagctataag
     1621 gaaatattaa agatatagtc atataataaa gtttgagaat tctcaaaaga caaaaa
//
