LOCUS       XM_039090041            2304 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger CW-type and PWWP domain
            containing 1 (Zcwpw1), transcript variant X1, mRNA.
ACCESSION   XM_039090041
VERSION     XM_039090041.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051347.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2304
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2304
                     /gene="Zcwpw1"
                     /note="zinc finger CW-type and PWWP domain containing 1;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 EST, 1 long SRA read, 6 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 9 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:304368"
                     /db_xref="RGD:1305405"
     CDS             262..2157
                     /gene="Zcwpw1"
                     /codon_start=1
                     /product="zinc finger CW-type PWWP domain protein 1
                     isoform X1"
                     /protein_id="XP_038945969.1"
                     /db_xref="GeneID:304368"
                     /db_xref="RGD:1305405"
                     /translation="MAALQSHREYEKGTKKTFAPPTQKSHIEKPRPNSWKEDTPGTSS
                     LEAETKPSLLKASLKKKQKATTEHGPSRGQEKKQKAHDQPAEKKGKEKTLTSAEFEEI
                     FQIVLQKSLQECLGLGSGLNFAETSCIQRIRPTKSDKEPGIAPSATDKENADPEKVIT
                     PDTPDIASSVEEGVNSEMGTSSLCQPGTEPSKKKWDRRSLSKQKKKAEDEKMEKIQDE
                     RECTLKEKQKIMIRDQKEEEGSFGHCVIWVQCSSPKCEKWRQLRGDIDPSVLPDDWSC
                     DQNPDLNYNRCDIPEESWTGCESDVAYASYVPGSIVWAKQYGYPWWPGMIECDPDLGE
                     YFLFASHLDSLPSKYHVTFFGEAVSRAWIPVRMLKNFQELSLELARLKKCKNKDSTQK
                     LEAAISMAHRAEQINIQERVNLFGFWSRYNGADIGEGKDWMLCESNSPESCLEKEEKN
                     SEEEKEEEGGKKDPTLPRPKPAKIQRKRPKSRGPVGGQDGTPKKKTVKKSLVSESTVP
                     PGPTLRGKEEQGNSDLDHPGPKKKFKAPENKASVNNLSEEKEIKIVSKCPAPPAQHGV
                     YTLGKDGLEPQVPLTQGATSFPPDDDGSSDLDLEQLMEDIGEPEERGEMQQRGSSEEF
                     LAALFEE"
ORIGIN      
        1 actaggcttt cactcggaag atggcgagct actccagctg ctcagacgca aaagcggctt
       61 ccctcggcgc atgcgcacta cgtctgtgag cgcacgccgc ttgggggcgg gatttgtccg
      121 tgtcttcgcg ccttctcctg gtggcgggaa aagtagctcg aggtggaagg gatgtgcgga
      181 atggctgcga tagcgttagc tgcgcttcat ctttaggtcc tcgtctcccc agaaggcaaa
      241 gaaagtgtag tttctgaact gatggctgca ttacagagtc acagagaata tgaaaaggga
      301 acaaagaaaa cctttgcccc acctacacaa aaatcacata ttgagaaacc tcggcccaac
      361 tcatggaagg aggacacccc agggaccagt tctctagagg cagagaccaa accaagcctg
      421 ctcaaagcca gcctgaagaa gaagcagaag gcaaccacag agcatggtcc aagcaggggc
      481 caggagaaaa agcaaaaggc tcatgaccag ccagctgaga agaaaggaaa ggaaaaaact
      541 cttaccagtg cagaatttga ggagattttc cagattgtac tacagaagtc cttgcaggag
      601 tgcttggggc tagggtctgg ccttaatttt gcagagactt cctgtatcca acgcataaga
      661 cctaccaaat cagacaaaga accgggcatt gctccttctg ccactgataa ggaaaatgct
      721 gatccagaga aggtaataac tcctgacact ccagatattg catcttctgt agaagaggga
      781 gtgaattctg agatgggcac atctagttta tgccagccag gtactgaacc ttctaagaag
      841 aaatgggata gacgctcttt aagcaaacaa aagaagaaag ctgaagatga gaaaatggag
      901 aaaatccaag atgaacgtga gtgcactctg aaagagaagc agaagataat gattcgggat
      961 cagaaagaag aggaaggtag ttttggccac tgtgtcatct gggtccagtg ttcctctcca
     1021 aagtgtgaga agtggaggca gctccgtggg gacattgatc cctccgttct tccagatgac
     1081 tggtcttgtg accagaatcc agacctgaat tataaccgct gtgatattcc tgaggagagc
     1141 tggacagggt gtgagagcga tgtggcctat gcctcctacg ttccaggatc cattgtctgg
     1201 gccaagcagt acggttaccc atggtggcca ggcatgatag aatgtgatcc tgacctgggg
     1261 gagtactttc tgtttgcatc tcatcttgat tccctgccgt ctaagtacca tgtgacattt
     1321 ttcggagaag cggtttctcg tgcgtggatc ccagtccgta tgctgaagaa tttccaggag
     1381 ctgtctttgg agctagctag actgaaaaaa tgcaagaaca aggactctac ccagaagctg
     1441 gaggcagcca tatcgatggc acacagggca gaacagatca atatccagga gcgggttaac
     1501 ttgtttggtt tctggagtcg atacaatgga gcagacatcg gggaaggaaa agattggatg
     1561 ctctgtgagt ccaacagccc tgagtcttgt ctggagaagg aggagaagaa ctccgaggag
     1621 gagaaggagg aggaaggagg gaagaaggac ccaactttgc ctagacccaa gccagctaaa
     1681 atacagagaa aaagacccaa gtcaagaggc ccagtaggag gacaagatgg gactccaaag
     1741 aagaagactg tgaagaaatc tctggtcagt gaatccacag tccctcctgg acctacactg
     1801 agaggaaagg aagaacaggg gaattcagac ctggaccacc caggccctaa gaaaaaattt
     1861 aaagctcctg aaaacaaggc ttcagtcaac aacttatctg aggagaaaga aattaaaatt
     1921 gtgtccaagt gccctgcccc accagctcag catggggttt atacattggg aaaggatggg
     1981 cttgagcccc aggtgcccct gacacagggt gcaacaagtt tccctcctga cgatgatggt
     2041 tccagtgacc tggacttgga acaactcatg gaagacattg gagagccaga agagagaggg
     2101 gagatgcagc agaggggcag ctcggaggag tttctggcag ccctctttga ggaatagagt
     2161 attgtggtcc ccctgctgtt gtctgctgca gggagagcat ctccgtcctc ctggtcagct
     2221 gttaaatgtt ggtgttgttg acctgctcca cagttcaaat cagagctgtg cggcctgtat
     2281 taataaagca ggtctctgag atta
//
