LOCUS       NM_001034940            1326 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Rattus norvegicus zinc finger CCHC-type and RNA binding motif
            containing 1 (Zcrb1), mRNA.
ACCESSION   NM_001034940 XM_343320
VERSION     NM_001034940.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1326)
  AUTHORS   Baltz,A.G., Munschauer,M., Schwanhausser,B., Vasile,A.,
            Murakawa,Y., Schueler,M., Youngs,N., Penfold-Brown,D., Drew,K.,
            Milek,M., Wyler,E., Bonneau,R., Selbach,M., Dieterich,C. and
            Landthaler,M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
REFERENCE   2  (bases 1 to 1326)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
REFERENCE   3  (bases 1 to 1326)
  AUTHORS   Will,C.L., Schneider,C., Hossbach,M., Urlaub,H., Rauhut,R.,
            Elbashir,S., Tuschl,T. and Luhrmann,R.
  TITLE     The human 18S U11/U12 snRNP contains a set of novel proteins not
            found in the U2-dependent spliceosome
  JOURNAL   RNA 10 (6), 929-941 (2004)
   PUBMED   15146077
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC099747.1.
            
            On Oct 21, 2005 this sequence version replaced XM_343320.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC099747.1, SRR8487227.64010.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1326
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q35"
     gene            1..1326
                     /gene="Zcrb1"
                     /gene_synonym="RGD1309851"
                     /note="zinc finger CCHC-type and RNA binding motif
                     containing 1"
                     /db_xref="GeneID:362990"
                     /db_xref="RGD:1309851"
     exon            1..137
                     /gene="Zcrb1"
                     /gene_synonym="RGD1309851"
                     /inference="alignment:Splign:2.1.0"
     exon            138..223
                     /gene="Zcrb1"
                     /gene_synonym="RGD1309851"
                     /inference="alignment:Splign:2.1.0"
     CDS             140..793
                     /gene="Zcrb1"
                     /gene_synonym="RGD1309851"
                     /note="U11/U12 snRNP 31 kDa protein; U11/U12 small nuclear
                     ribonucleoprotein 31 kDa protein; zinc finger CCHC-type
                     and RNA binding motif 1"
                     /codon_start=1
                     /product="zinc finger CCHC-type and RNA-binding
                     motif-containing protein 1"
                     /protein_id="NP_001030112.1"
                     /db_xref="GeneID:362990"
                     /db_xref="RGD:1309851"
                     /translation="MSGGLAPSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKD
                     KDTRKSKGVAFILFLDKDSALNCTRAINNKQLFGRVIKASIAIDNGRAAEFIRRRNYF
                     DKSKCYECGESGHLSYACPKNMLGEREPPKKKEKKKKKKVPEPEEEIEEVEVSEEEGE
                     DPALDSLSQAIAFQQAKIEEEQNKWRPSTGGPSTSDDSRRPRIKKSAYFSDEEELSD"
     exon            224..252
                     /gene="Zcrb1"
                     /gene_synonym="RGD1309851"
                     /inference="alignment:Splign:2.1.0"
     exon            253..364
                     /gene="Zcrb1"
                     /gene_synonym="RGD1309851"
                     /inference="alignment:Splign:2.1.0"
     exon            365..472
                     /gene="Zcrb1"
                     /gene_synonym="RGD1309851"
                     /inference="alignment:Splign:2.1.0"
     exon            473..585
                     /gene="Zcrb1"
                     /gene_synonym="RGD1309851"
                     /inference="alignment:Splign:2.1.0"
     exon            586..661
                     /gene="Zcrb1"
                     /gene_synonym="RGD1309851"
                     /inference="alignment:Splign:2.1.0"
     exon            662..1312
                     /gene="Zcrb1"
                     /gene_synonym="RGD1309851"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ccgggtttcg gggatacgga agaaacgctg caccgcgctg cggtcgcgga cgcccgcgct
       61 cttgcgcgcc gcggaaggca gctgggggtg gagccgccgc gggctcgcat ccagcctgct
      121 cggccactgc gtcgaagaaa tgagcggtgg cttggctcca agtaagagca cagtttatgt
      181 atccaacttg cctttctccc tgacaaacaa tgatttatac cggatatttt ccaagtatgg
      241 caaagttgta aaggttacta taatgaaaga caaggatact aggaagagta aaggtgttgc
      301 attcatttta tttttggata aggactctgc cttaaactgc accagagcaa taaataataa
      361 acagttattc ggtagagtga taaaggcaag catcgccatt gacaacggaa gagcagccga
      421 gttcatccgg aggcgaaact actttgataa atctaagtgc tatgaatgtg gggaaagtgg
      481 acacttaagt tatgcctgtc ctaaaaacat gcttggagaa cgtgagcctc caaagaagaa
      541 agaaaagaag aagaaaaaga aagtccctga accggaagaa gaaattgagg aagtagaagt
      601 gagtgaagaa gaaggggagg acccggctct cgacagtctc agtcaggcca tagcattcca
      661 gcaggccaaa attgaagaag aacaaaacaa atggagaccc agcacagggg gtccctcgac
      721 ctccgatgat tctagaagac caagaataaa gaagagcgca tacttcagtg atgaggagga
      781 actcagtgac taaatcatat ttattttgta aatattattc aaataaatct cacagtacca
      841 aatgcagttg tggaatagag actgctttca gtgtttgaga ataagaacac ttaaagccaa
      901 atagtactta ctctaatgta gttccaacgg gatgatgttt aaataatttt gaagtaccat
      961 gattgtagct tgccttagca cactgcaaat cctaaatctg aaagtccaag atctaaagtg
     1021 ttctagactt ggagcaccaa cgtgatgtct caagtgggac tgtgaaactc acttccaaca
     1081 ctgttaaata ctggagcaaa ctgctctcag actacagtgt acatgataca taactgagtc
     1141 tgtgtttgca cttggttctt atccaagtat ctccttatgt atatgcagtt ctaccaggat
     1201 cagagctacc atagtgcaaa gcattgcaca tatgggaccc tccatctgta ctcaagtcag
     1261 aaattgttat aaacaatctt aaaataattc taaataaaat ttaatactac caaaaaaaaa
     1321 aaaaaa
//
