LOCUS       NM_001013156            1447 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus zinc finger CCHC-type containing 9 (Zcchc9),
            mRNA.
ACCESSION   NM_001013156 XM_226694
VERSION     NM_001013156.2
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1447)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
REFERENCE   2  (bases 1 to 1447)
  AUTHORS   Hendrickx,A., Beullens,M., Ceulemans,H., Den Abt,T., Van Eynde,A.,
            Nicolaescu,E., Lesage,B. and Bollen,M.
  TITLE     Docking motif-guided mapping of the interactome of protein
            phosphatase-1
  JOURNAL   Chem Biol 16 (4), 365-371 (2009)
   PUBMED   19389623
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000002.1.
            
            On Nov 27, 2020 this sequence version replaced NM_001013156.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC083695.1, SRR26643284.2464.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN16676785, SAMN16676789
                                           [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-410               JAXUCZ010000002.1  24781589-24781998   c
            411-561             JAXUCZ010000002.1  24777598-24777748   c
            562-654             JAXUCZ010000002.1  24777350-24777442   c
            655-723             JAXUCZ010000002.1  24775498-24775566   c
            724-1447            JAXUCZ010000002.1  24773319-24774042   c
FEATURES             Location/Qualifiers
     source          1..1447
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q12"
     gene            1..1447
                     /gene="Zcchc9"
                     /note="zinc finger CCHC-type containing 9"
                     /db_xref="GeneID:309986"
                     /db_xref="RGD:1307450"
     exon            1..410
                     /gene="Zcchc9"
                     /inference="alignment:Splign:2.1.0"
     CDS             27..842
                     /gene="Zcchc9"
                     /note="zinc finger, CCHC domain containing 9"
                     /codon_start=1
                     /product="zinc finger CCHC domain-containing protein 9"
                     /protein_id="NP_001013174.1"
                     /db_xref="GeneID:309986"
                     /db_xref="RGD:1307450"
                     /translation="MTRWARVTTSNSKRPLSATSWEDMKKGSAEGANQNPSNHKRCQV
                     SGLSLRNDAPQAKHKKNKKKKEYLNEDVNGFMEYLKQSSQVLHNGQLIAADSREVREE
                     IAVALKKDSRREGRRLKRQAAKKNAMVCFHCRQPGHGIADCPAVLESQDMGTGICYRC
                     GSTEHEMTKCRANVDPALGEFPFAKCFVCGEMGHLSRSCPDNTKGVYADGGGCKLCGS
                     VEHFKKDCPENQNSDRIITVGRWAKGMSADHEDVLDVPKPQKPKTKVPKVVNF"
     exon            411..561
                     /gene="Zcchc9"
                     /inference="alignment:Splign:2.1.0"
     exon            562..654
                     /gene="Zcchc9"
                     /inference="alignment:Splign:2.1.0"
     exon            655..723
                     /gene="Zcchc9"
                     /inference="alignment:Splign:2.1.0"
     exon            724..1447
                     /gene="Zcchc9"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 attagttaag tacctctgat ccagccatga ccaggtgggc tagagttaca acttcaaata
       61 gtaagagacc cttgtcagca acatcatggg aggacatgaa gaagggctct gcagagggag
      121 caaaccaaaa cccttcaaat cataagcgat gtcaagtcag tgggctgtcc cttagaaacg
      181 acgcacctca ggcaaaacac aagaagaaca aaaagaaaaa agagtatttg aatgaagatg
      241 tgaatgggtt catggaatac ctgaagcaga gctcacaggt gcttcacaat ggacagctga
      301 tagcagccga cagcagagaa gtaagggaag aaattgcagt ggccttaaag aaggacagcc
      361 ggcgggaagg aaggcggcta aagagacagg cagcaaagaa gaatgcaatg gtgtgtttcc
      421 actgtcgaca acctggccat ggaatcgctg actgcccagc tgtgctagag agtcaggaca
      481 tgggcaccgg catttgttac cgctgcgggt ccacggagca cgagatgacg aagtgcagag
      541 ctaacgtaga ccctgcgctt ggcgaatttc cttttgcaaa gtgttttgtc tgcggagaaa
      601 tgggacatct gtccagatcc tgccctgata acaccaaagg agtctatgct gacggtggcg
      661 gctgtaaact ctgtggctcc gtggaacatt ttaagaaaga ttgccctgaa aatcagaact
      721 cagatcgaat catcacagtt ggtcgctggg caaagggaat gagtgcagac cacgaagatg
      781 ttctggatgt gcccaaacca cagaaaccta aaacaaaagt acccaaagta gttaattttt
      841 gataagaatt ggtacagttg ttaagtacca tctcaaggtt acttcccaaa gtaggccttt
      901 agagattaaa gctggcccgt gtgggggcaa acttgtatta gagacacgac tctgactttg
      961 atgggggtca ggctgcctgc agtctgtcta ttaaggagta cagagtgatt gattatagtc
     1021 tctagacgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtggt ctgtctgcct
     1081 gtctctctgt gcctgtgtgt ctgtctgtat ttgaaacaga gtctatgtag cccaggttgg
     1141 cttcagacta ataactgtgc accaggtcca gagtactgag attcaggcag tgtgattgag
     1201 agcttttttt atcagatggt acttagaaac agctaagtgc ctctacctga tggtggcagt
     1261 cactgctata aatgtaaatt atgactcaaa attgacccct aaacaaagca catgcatttc
     1321 agcttgtgaa taaatatttt gttatatgct cttaattcag agtatcaatt tattgtcata
     1381 gaaatttata tgttgtcaca aaatctgtaa tttttagtgc tgaataaaat tatatcagct
     1441 gtttgtc
//
