LOCUS       NM_001106658            2019 bp    mRNA    linear   ROD 30-JUL-2024
DEFINITION  Rattus norvegicus zinc finger CCHC-type containing 7 (Zcchc7),
            mRNA.
ACCESSION   NM_001106658 XM_216407
VERSION     NM_001106658.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2019)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC161967.1.
            
            On Apr 6, 2008 this sequence version replaced NM_001106658.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC161967.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132291, SAMD00132293
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2019
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q22"
     gene            1..2019
                     /gene="Zcchc7"
                     /note="zinc finger CCHC-type containing 7"
                     /db_xref="GeneID:298086"
                     /db_xref="RGD:1310467"
     exon            1..18
                     /gene="Zcchc7"
                     /inference="alignment:Splign:2.1.0"
     exon            19..643
                     /gene="Zcchc7"
                     /inference="alignment:Splign:2.1.0"
     CDS             43..1671
                     /gene="Zcchc7"
                     /note="TRAMP-like complex RNA-binding factor ZCCHC7; zinc
                     finger, CCHC domain containing 7"
                     /codon_start=1
                     /product="zinc finger CCHC domain-containing protein 7"
                     /protein_id="NP_001100128.1"
                     /db_xref="GeneID:298086"
                     /db_xref="RGD:1310467"
                     /translation="MFGGFETIEAFEDDLYRDDSSSELSVDSEVEFQLYSQVHYSQNI
                     HNANEEEGYEEKNCESSETVSIQPDQKNLIVLSDSEVIQLSDTSEVITLSDEDSIYRC
                     KRKNIEVQAQEKTQSPATPRSNKVANKCKRSNKKPEPEESPSTIREVMIIEVSSDEEE
                     ESTISENENVESWMLLGCEEDDKDNDILLNLVGCKDAGAEGENDVNWFISDKDIEAKI
                     DNNRSSGRWNNRYYSVNKNVTCRNCDKRGHLSKNCPLPQKVRPCCLCSERGHLQYGCP
                     ARYCLDCSLPMSSTHRCFERSSWRKRCDRCDMIGHYADACPEIWRQYHLTTKPGPPKK
                     PKTPSGQSALVYCYNCAQKGHYGHECTERRMFNQAFPTSPFIYCYDDKYDIQQRDRRI
                     KRKLKDIKKNGDFPRQFKRPHGEETDRYHHDRRKSRFSGKRSRWPRESKETQKEKTRG
                     REGEKHRRDRQPRDEDEDFPRGLKPNSSSSSNSQKPSKSLHQASHYHRLREEKLRRES
                     MRSKPKKRKFVEDGSHDDLFLIKQRKKKPKSSGF"
     exon            644..687
                     /gene="Zcchc7"
                     /inference="alignment:Splign:2.1.0"
     exon            688..813
                     /gene="Zcchc7"
                     /inference="alignment:Splign:2.1.0"
     exon            814..984
                     /gene="Zcchc7"
                     /inference="alignment:Splign:2.1.0"
     exon            985..1020
                     /gene="Zcchc7"
                     /inference="alignment:Splign:2.1.0"
     exon            1021..1116
                     /gene="Zcchc7"
                     /inference="alignment:Splign:2.1.0"
     exon            1117..1234
                     /gene="Zcchc7"
                     /inference="alignment:Splign:2.1.0"
     exon            1235..2014
                     /gene="Zcchc7"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctggtcgcag ccgcggcaca ttgcggcaac tgactttcca taatgtttgg tggctttgag
       61 actatagaag cattcgaaga tgacctttat cgtgatgatt catctagtga acttagtgtt
      121 gatagtgaag tggaatttca gctctacagc caagtccatt attcccagaa tattcataat
      181 gccaacgagg aggaagggta tgaggaaaag aactgtgaga gttctgaaac agtgagtatt
      241 caaccagacc agaagaactt aatcgtcctt tcagatagtg aggtcatcca gctgtcagat
      301 acatcagagg tcatcacatt gtctgatgaa gatagtattt atagatgtaa gagaaaaaat
      361 attgaagtcc aagcacaaga aaagacccaa agtcctgcaa cgcctcgttc taataaagtg
      421 gctaacaaat gcaagaggag taataagaag cctgaacctg aagagagccc aagtacgatc
      481 cgagaggtca tgatcataga ggtcagctca gatgaggagg aagaaagtac catttcagag
      541 aatgaaaatg tggaaagctg gatgctcctg ggatgtgagg aagatgataa agacaatgac
      601 atccttctca acctggtggg atgcaaggac gctggtgctg aaggagaaaa tgatgtaaat
      661 tggttcatca gtgacaaaga catcgaggcc aagatagata acaacagatc atctggaagg
      721 tggaacaacc gatactattc agtcaacaaa aatgtcacgt gtagaaattg tgataaacgt
      781 ggccatttgt caaaaaactg ccccttacca caaaaagtcc ggccctgctg tctctgctcg
      841 gaaagaggac acctccagta tggctgtcca gcccgttact gcttagactg ctctttgccc
      901 atgtcttcca ctcacagatg ttttgaaaga tcttcctgga gaaagcgatg tgaccgatgt
      961 gatatgatag gccactatgc tgatgcttgc ccagaaatct ggaggcagta tcacctaacg
     1021 accaaacctg gaccacctaa aaagccaaag accccttctg gacaatcagc gctggtgtat
     1081 tgctacaact gtgcacagaa aggccattat ggacatgaat gtacagagag acggatgttt
     1141 aaccaggcgt ttccaacatc tccattcata tattgctatg acgacaaata cgacatccag
     1201 caaagggatc ggagaataaa acggaaactg aaagatatca agaaaaatgg agattttcca
     1261 aggcagttca aaagaccaca tggagaagag acagatagat atcaccatga taggagaaaa
     1321 agccgtttct caggaaaacg cagtcggtgg cctcgagaaa gtaaggaaac gcagaaagag
     1381 aagaccaggg gtagagaagg cgagaagcac aggagggacc gccagcctcg cgatgaggat
     1441 gaagacttcc ctaggggcct gaaacccaac tcctccagca gcagtaacag ccagaagcct
     1501 tctaagtccc tccaccaggc atcccattac cacaggctga gggaagagaa gcttcgcaga
     1561 gagagcatgc ggagcaagcc gaagaaaagg aaattcgtag aggatggcag ccatgatgat
     1621 ttatttctta ttaagcaaag gaagaagaaa cctaagtcca gtggtttctg acctggtctt
     1681 cctggttcag tgttctggaa gtgcttcagt atctgttaaa tgaagaaagg ctggggattt
     1741 tgatcgctga attctggcca ttcctgaagt gctgtacaaa ggccacggag agttcaggtc
     1801 tgtgtccacc gggtgtcctt aggtaggaag gcaaacttga ggtagaaaat tgtcatttca
     1861 agaaaacctt tttaaatgct ttgaagaaat tacaagttca tcagatataa ttcatctaca
     1921 atgtttgagg acttaaaagc tcattggaag agagtttatt attaaagaaa agtcaccgct
     1981 tttttagcaa tctttaaaaa aaaaaaaaaa aaaaaaaaa
//
