LOCUS       NM_001108394            4423 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus zinc finger CCHC-type containing 24 (Zcchc24),
            mRNA.
ACCESSION   NM_001108394 XM_001056656 XM_341390
VERSION     NM_001108394.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4423)
  AUTHORS   Baltz,A.G., Munschauer,M., Schwanhausser,B., Vasile,A.,
            Murakawa,Y., Schueler,M., Youngs,N., Penfold-Brown,D., Drew,K.,
            Milek,M., Wyler,E., Bonneau,R., Selbach,M., Dieterich,C. and
            Landthaler,M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474067.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_341390.3, XM_001056656.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMEA5756307, SAMEA5760383
                              [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..4423
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /map="16p16"
     gene            1..4423
                     /gene="Zcchc24"
                     /gene_synonym="RGD1306164"
                     /note="zinc finger CCHC-type containing 24"
                     /db_xref="GeneID:361104"
                     /db_xref="RGD:1306164"
     exon            1..261
                     /gene="Zcchc24"
                     /gene_synonym="RGD1306164"
                     /inference="alignment:Splign:2.1.0"
     CDS             16..741
                     /gene="Zcchc24"
                     /gene_synonym="RGD1306164"
                     /note="zinc finger, CCHC domain containing 24"
                     /codon_start=1
                     /product="zinc finger CCHC domain-containing protein 24"
                     /protein_id="NP_001101864.1"
                     /db_xref="GeneID:361104"
                     /db_xref="RGD:1306164"
                     /translation="MSLLSAIDTSAASVYQPAQLLNWVYLSLQDTHQASAFDAFRPEP
                     PAGAAPPELAFGKGRPEQLGSPLHSSYLNSVFQLQRGETLSSSVYRNASPYGSLNNIA
                     DGLSSLTEHFSDLTLTSEARKPSKRPPPNYLCHLCFNKGHYIKDCPQARPKGEGLTPY
                     QGKKRCFGEYKCPKCKRKWMSGNSWANMGQECIKCHINVYPHKQRPLEKPDGLDVSDQ
                     SKEHPQHLCEKCKVLGYYCRRVQ"
     exon            262..462
                     /gene="Zcchc24"
                     /gene_synonym="RGD1306164"
                     /inference="alignment:Splign:2.1.0"
     exon            463..627
                     /gene="Zcchc24"
                     /gene_synonym="RGD1306164"
                     /inference="alignment:Splign:2.1.0"
     exon            628..4423
                     /gene="Zcchc24"
                     /gene_synonym="RGD1306164"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 caccgccacg gcaaaatgag cctgctgtct gccatcgaca cgagcgccgc ctcggtgtac
       61 cagccagccc agctactcaa ctgggtctac ctgtctctcc aggacacaca ccaggctagt
      121 gccttcgatg ccttccggcc cgagccgccc gccggcgccg cgcccccgga gctggccttc
      181 ggcaagggcc gcccggagca gctgggttct cccctgcact ccagctatct taacagcgtc
      241 ttccagctgc agcgcggaga gacgctgagc agcagtgtgt ataggaacgc ttcaccctat
      301 ggctccctca acaacattgc tgatggcctc agctccctca cagagcattt ctcggatctg
      361 acgctcacct ctgaagcccg caaacccagc aaacggcctc ctccgaacta cctgtgccac
      421 ctgtgtttca acaaaggaca ctacattaag gattgccctc aggcacgccc caaaggtgag
      481 ggtctgacac cgtaccaagg caagaagcgc tgctttggcg agtacaagtg cccaaaatgc
      541 aagagaaaat ggatgagcgg aaactcctgg gccaacatgg ggcaggagtg catcaagtgc
      601 cacatcaacg tgtacccaca caagcagaga cccctggaga aacctgatgg cctggacgtg
      661 tctgaccaga gcaaggagca ccctcaacac ctctgcgaaa agtgcaaggt cctgggctac
      721 tactgtcgtc gtgtgcagtg accttggcca ccactgtagc acccctcagc tgccacctcc
      781 ctgtgctgcc caaagggctg aatgtcccca tcctcaagga gatgtcacaa gcctgtggct
      841 tacacagagg agacttgtgc ccttgtctca cgtgctgaca gagcagccga catgctccca
      901 acagggtgca gagacaggag gatcagggac tcttcaccat aggcctgggc tccgtaggag
      961 gccagaggcc agcagaggtc ttgatgttcc tgcaagctct cttcctgagt gtctctgggg
     1021 caagcaacct tgcatgtgac accagtacac taagtgaact gtgaatccca aggcctgtgg
     1081 gaagttctcc ctccaagacc agccaggccc tctcctaccc agcaccttgc agcttgcctc
     1141 ctatgaaaaa ccactctagg aagccccatg ccattcctga tctgtagcca cagggcagtc
     1201 acttgttcta gcagctgctg aggagaggcc ttctgagtgg ccttctgtcc ctgcccacac
     1261 tgagtctcaa atctgagcag ccctgacatc accgcattgc acctggtagc taaacccagc
     1321 ctccctccgc caatgggaca ggcaggcaga gggtgagccc agggggagac tgaacagtaa
     1381 ccagtgtgcc aagacatcct agggacatca ggcatcacca cttcccatga tgccccgaga
     1441 ctgtcctgta ggtttgggtt ctgtcagctg ctctctcttt acccctagcc ttcacccatg
     1501 ttcgagatgc caccccgcaa aagcccgtaa aaggcacgaa ggatgcaggc cttggcattc
     1561 tggagccact ttctgccatt tggggcaagg acatctccag ccttaatttc cccattagtt
     1621 aagtgacaaa gtgccaccag aaagcaggag gtcccagtga tctctgacgt tctagaagag
     1681 agctggctgc ctctggaaca cagagtgtca ctggggggtg atctgccttt agagatccag
     1741 gtgcactgcc ctccagcctc tgttctgaaa gtcacttagg atgtcaggct gaatgatgcc
     1801 aggtcctctc ctatagtcct ccttgcctgg tgttcccatc ccccaagaag atgattcctc
     1861 ctcttcctcc tcttcctcct cagcccctca catgggcaag cctaaaatga gccacagaac
     1921 ctctcctttg gaaactggag atagtgattt cctacttcct aaggaggcag agagagattt
     1981 cctggcatgt cacatggtcc caggggtggg gctgtcgtcc tggccagggt cagcagtgca
     2041 ccccctaccc tgtgacaagc tgaatttctc ttatctttct cttcttcacc agctgtcagg
     2101 actgagttgc ttgactttgc cctacactat gcttctatgg agagagagag aaaaaaaatc
     2161 agaccatgaa ataggcctga aattcagtgt ttacatatgg tgcccagctg ccctttgttt
     2221 tcaaatgaaa atgtcttgta cgactgagga gtcatgtgaa gtgttaagcg agggtccagg
     2281 ggttaagtgg aagagatggc cgtgtgtctg cagcagctag ttgcagggtg gattgtggga
     2341 gaacgtaccc tctcagcact tagcaaaggt atacccagac ttacagcagt gtggtggccc
     2401 agactgcttc cacccgctgc cctcaaatgg tggcatgctg ggctgcagac ggtgagcacc
     2461 cagcaccaag ggtttcccag tcttgctgct gcactagggc tgcctccgtg ccaagcttcc
     2521 tgtcgcttgg aaaggacctt ttctgtcagg catcccaccg ggggccctaa agagaatgtc
     2581 acaacaatgg acagtgtacc tgtgtcccaa acggggacaa gtcgggaata ggtaaactga
     2641 gtcaaaaatg caaagagcta gtgacagtct tcagacagcc agggccagta gaaggttagc
     2701 tatcagccta aagagacatt ttggtcacta gactgatgtc tgtgcacagc caggcccctc
     2761 tcaccccagg cagtctcttc ctggccctgc tttgcaatgc tttggctgaa cttgtgacct
     2821 tcctgaggct agcaaaagat accactatta agactgggtg ttggaagact taatgctcag
     2881 agggcctagg agcccagggg acaagaaagt gtgtggttgt agtacattca aaagggacaa
     2941 tcgcttgcag tcagtagatc tagtgatcta gttgagagag aacggcgttt accccatatg
     3001 aagtattcag tagctctact tgtgaatttg tatttatttt gagttatact tgacacggaa
     3061 ttcttttttt tttaaatgct atgtgtgtat tttggggaaa aaaattcata gatgttaaaa
     3121 tttctgcatg gttaccaggt tttctttgga cgtggaactt ggtggcctcc ccctccaacc
     3181 cccaaatttc ttcataggga tttttgtttg tatatatttg agggtctttt tttaaaaaag
     3241 aaaaatgtga tggcttgaca ctattgaaat tgaaaacaac aaaaaggtat gcttttagcc
     3301 tccagtgctt tggaaagcgc agtacacatc aaactgattt ttagatatat tttgcaagtc
     3361 tggttgagct ataagaagat atttatggtg agaacttttc ctttttttct tgtcattttt
     3421 ttctatgctt tggtctgtaa aaagtatgca actgaactac attaagaagg aaatattatc
     3481 tacatagaat tattatatga agctggtaca taattctaac gaggaaaaaa aatcttcgta
     3541 atcttttaag ctgttttttt ttttaatttc gttttccttg gatgaaaata tcagtattaa
     3601 gcagccagtg tattattcaa gtgtttagac ttattaatat gctcttgtct tgtatttata
     3661 catttgtgta ttttggaagt attgcctctc taagggacgt taacaatgga caacatggca
     3721 aaaagggaat agccatcctg tgtctcttcc accaaggatg acaggtggca ttgactcttc
     3781 ccctgcatcc ttgtactatt gccttgttat tacaggtttg ttaattttta ggggaagggc
     3841 aggaaatgga caagggaaga ggacacatcg gacgaacaga tcctttggtc tgtgagccca
     3901 gtgaccttgt cagcaagacc caaggaggta caagaacccc cgaggcaggc ttcctccttg
     3961 tcccagtcct gcctggaagc cccaagctct ttgaactcgg atctgtccac taagccctca
     4021 cacctgcctt ctagtgctaa tggacttgaa tttaccttaa agtctaatcc aacctcacta
     4081 cattgtagcc agtgcaacag ctaatactga aataaggggt ctttgcagcc atcttctgcg
     4141 aagtggcaat aaggcttgtc ctttgctctt atggccaact tcccttcaac cctgtgtggt
     4201 gatcctgtcc atgtctgtgt ctgtttgtgt gtgtgcattc agctaaaaag acaaacagaa
     4261 cccgtgagcc cgcctagagg gtgcatggag aaagttcctg acttccctga aagggccggc
     4321 ctcggggtgg cattccgttg tgtgccttat tcctggagac tatataaagc ttgcctatga
     4381 aaatatagcc tttcagtgct gtattaaaag gactttggaa aga
//
