LOCUS       NM_001402235            2322 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus zinc finger, CCHC domain containing 18 (Zcchc18),
            mRNA.
ACCESSION   NM_001402235 XM_039100641
VERSION     NM_001402235.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2322)
  AUTHORS   Florea,L., Di Francesco,V., Miller,J., Turner,R., Yao,A.,
            Harris,M., Walenz,B., Mobarry,C., Merkulov,G.V., Charlab,R.,
            Dew,I., Deng,Z., Istrail,S., Li,P. and Sutton,G.
  TITLE     Gene and alternative splicing annotation with AIR
  JOURNAL   Genome Res 15 (1), 54-66 (2005)
   PUBMED   15632090
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000021.1.
            
            On Mar 8, 2022 this sequence version replaced XM_039100641.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360176.1466747.1,
                                           SRR26643298.32738.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-234               JAXUCZ010000021.1  105111894-105112127
            235-310             JAXUCZ010000021.1  105112451-105112526
            311-450             JAXUCZ010000021.1  105112675-105112814
            451-2322            JAXUCZ010000021.1  105113225-105115096
FEATURES             Location/Qualifiers
     source          1..2322
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq32"
     gene            1..2322
                     /gene="Zcchc18"
                     /note="zinc finger, CCHC domain containing 18"
                     /db_xref="GeneID:102555659"
                     /db_xref="RGD:1591868"
     exon            1..234
                     /gene="Zcchc18"
                     /inference="alignment:Splign:2.1.0"
     exon            235..310
                     /gene="Zcchc18"
                     /inference="alignment:Splign:2.1.0"
     exon            311..450
                     /gene="Zcchc18"
                     /inference="alignment:Splign:2.1.0"
     exon            451..2322
                     /gene="Zcchc18"
                     /inference="alignment:Splign:2.1.0"
     CDS             576..1757
                     /gene="Zcchc18"
                     /codon_start=1
                     /product="zinc finger CCHC domain-containing protein 18"
                     /protein_id="NP_001389164.1"
                     /db_xref="GeneID:102555659"
                     /db_xref="RGD:1591868"
                     /translation="MASLLARMGNSRRQNAAFMPLAHSMLRALGRSLGPLIANIAERN
                     IQSFSGRAELAPGEETFENWLSQVHEVLPDWPMSEEDKIKRLMRTLRGPAREAMRLFQ
                     ADNPNLNVAEFLRAMKLLFGESESSITAHGKFLNTLQAQGEKPSLYVIRLEVQLQNAI
                     QAGVLPQSEANRTRLHQLLVGAELSRELRIKLKGLLQMHAHNEQESLPDFLELIRMIR
                     EEEDWDETFLRNKRPRRSETVMERAASPVVFQGSLPIVIGSADCNVIEIDDSQDDSDE
                     DVILVEPEDPPLSSPGTSSLRGTVSTQEEMLVIESPDESDEESPSTSSGSGQRNNGPG
                     DVGRTRKRKYPIRCPHCGEEGHAKETCDNTSNKGQVFENLIVTLQELTHMERPKPPAP
                     Y"
ORIGIN      
        1 aatgggcaga ggctaaaagc agccgctgca gctctgcagg ctgaactgag ggcgggggca
       61 gctgcagctg ccttggaaac gcgctgcgtc tctactaccc ctggctgggc agccctgcaa
      121 agagcctagc ccagacagct caggggctga gacgccatcc tttctcctgt aggccctaag
      181 aggtgagaca gctcttcaca gcagaccctg agcatcctct gcccatctac gaagcagccc
      241 atcaaagccg atttcaaacg tgaattctgt gtgactgatt gcagagctgg taggccgctg
      301 ttttccccgg tataaactgg aggcccagaa cccctggatc tgagagcctg tggtcagaga
      361 tcagccctac ccggacaaga actattacgg aaagcacctg ttgcaaaggc tcggcttgaa
      421 ataaaggtgg aagccagttt ctgagctctg ctcctaccca agcgcaagga agatactgcc
      481 cgggaacgtt tctttggagg tttctgcaga ctaggccgtt tttgttagca gaaagtccaa
      541 gtatcttgta ttcagatacc caattgttgt caggcatggc tagcctcctt gctaggatgg
      601 gtaacagtcg ccgtcagaat gcagctttta tgcctttggc ccattccatg ctgagggccc
      661 tggggaggag cctcggtcct ttgatagcta acattgcaga gagaaacata cagtcgttct
      721 ctgggagggc cgagctagcc ccgggggaag aaacctttga gaactggcta agccaagtcc
      781 atgaggtcct gccagattgg cccatgtctg aagaggataa gattaaacgc ctgatgagaa
      841 cccttagggg ccctgcccgg gaggccatgc gtttgttcca ggctgacaat cccaatctaa
      901 acgtagcaga atttttgcgg gcaatgaagt tgctgtttgg ggaatctgag agcagtataa
      961 cagcacatgg caaatttcta aacaccctgc aggcacaggg agagaaacca tccctgtatg
     1021 tgatccgttt agaggtgcag ctgcagaatg ctatccaggc aggggtcctt cctcagagcg
     1081 aggcaaacag aactcgcctg caccagctcc ttgtaggggc tgagctgagt agggagctgc
     1141 gcatcaagct taagggtctt ctccaaatgc acgcgcataa cgagcaggag agccttcccg
     1201 acttcctgga gttaatcagg atgatcaggg aggaagagga ttgggatgag actttcctta
     1261 gaaataagcg gcccaggaga tctgagacag taatggagcg ggcagccagc cctgtcgtct
     1321 ttcagggctc cctgcctata gtgattggca gtgctgactg taacgtgata gagatagatg
     1381 attcccagga tgattcagat gaggatgtga tcctggtgga gcctgaggac cctccactct
     1441 catccccagg tacctcatcc ctcagaggca cagtcagtac tcaggaagaa atgctagtta
     1501 ttgaatcccc tgatgaatct gatgaggagt ctccttccac tagcagtggt tctgggcaaa
     1561 ggaataatgg gcccggggat gtaggcagaa ccagaaagcg aaagtacccc atccgctgtc
     1621 ctcattgtgg tgaagagggc catgccaaag aaacctgtga caataccagc aacaagggcc
     1681 aggtttttga gaatctgatt gtcactctgc aggagctgac tcatatggag agaccaaagc
     1741 cccctgcacc atactaaggt gtgtgcctca gccccagatc aacgtttaag tctcctcaaa
     1801 agctaattct ggagggaaaa gggatggggt gggcttctaa cataaggaat tcatttaaaa
     1861 caagcttttc ttgggagaag aaaaagcaga ctgggttacc atgcaagaca gaggcatggg
     1921 cccatatcat tccttgctca ttccactaac tgcttaatgg ttgtttctct gtgtgtcttt
     1981 ctctggtgat tttaatctat ctgtgaagtg gtatctcttt gaaccttcca agtgaaatta
     2041 aaaagaaaaa acctaaagtg cacattacct gaaaccccca ccctgataca atcgtcgtca
     2101 gtcctttggt gaatgtcctt gtgatctttc tctggacctt tgtgcctagg tatatatgta
     2161 ttgataaaag tgatcatata agtgctgttc tatagtatgt attttttcat cgcgcagtat
     2221 atattgtgga cttctaaata aatgaatata taaccatcta atgtcatgca tactatatat
     2281 ctggggaaga caaataaaga ctgaaactaa ctgtaacaac ta
//
