LOCUS       XM_344780               6846 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus zinc finger CCHC-type containing 14
            (Zcchc14), transcript variant X1, mRNA.
ACCESSION   XM_344780
VERSION     XM_344780.9
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051354.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Jan 18, 2024 this sequence was replaced by
            NM_001427306.1.
            
            On Jan 21, 2021 this sequence version replaced XM_344780.8.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6846
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..6846
                     /gene="Zcchc14"
                     /note="zinc finger CCHC-type containing 14; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 35 ESTs, 2 long SRA reads, 3 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 186 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:365018"
                     /db_xref="RGD:1309494"
     CDS             69..3332
                     /gene="Zcchc14"
                     /codon_start=1
                     /product="zinc finger CCHC domain-containing protein 14
                     isoform X1"
                     /protein_id="XP_344781.5"
                     /db_xref="GeneID:365018"
                     /db_xref="RGD:1309494"
                     /translation="MVEKRCPLQRDGVYRWFSELPSPQRVEFLCGLLDLCIPLELRFL
                     GSCLEDLARKDYHSLRDSEIKANNPADLGSLTNLTDEVVRSKLLVSLALLGSEQREAA
                     GVLYRTLTHTDSIIHNYGLQLNEGRTGDEFLLLFTMASNHPAFSFHQKQVLRQELTQI
                     QSSLNGGGGGGGGGGGGGKSAPGPSGALPTCSACHKMAPRTETPVSSISNSLENALHT
                     SAHSTEEALPKRPLGKHGKVSVEKIDLKGLSHTKSDRGVECSFEVLWSDSSVTSVTKS
                     SSEVTEFISKLSQLCPEENLDKLIPCLAGPDSFYVERNHVDLEAGLRFLASIPAHTLK
                     HDHVRKFFSASSPSQQLQSPSPGNPSPPKVGAMMGVSGRPVCGVAGIPSSQSSTQHHL
                     QHSASSSASLPHCSHTGGAGPALAYRTQVDNSPTILMPSGLQAPQPQEQNGILDWLRK
                     LRLHKYYPVFKQLTMEKFLSLTEEDLNKFESLTMGAKKKLKTQLELEKEKSERRCLNS
                     SAPSLVTSSGVARVTPTSHVGPVQPGRSSHASELRVEVEPPAHQLPREGSSSEYSSSS
                     SSPMGVQAREESSDSAEESDRRVDIHVEGTEKEKPVMLLAHFPSSSARPTAQVLPVQN
                     ETGSSPAGHHPLPAQLMPAAPHLAPVRMLNSVHKSDRGSTDVKLLSSSVHSLLSLEER
                     GKGPAPRSGTKVDKSFGGAVLDTLPSAAPHPPVQGLSGLVENTSVSPNVSFGPRAKVV
                     HAATLDRVLKTAQQPALTVETSSAATGTPSTVLHVARPPIKLLLSSSVPADTAISGQT
                     SCPNNGQISVPPAILNPRNALYTANTKVAFSAVSSVPVGPLQGSFCANSNTASPSSHP
                     STSFASMATLPSCPAPSSSPALSSVPESSFYSGGAGSSSPGNIPASSQSHHHHHHHQQ
                     PPAPPPPGCIVCTSCGCSGSCGSNGLTVSYANYFQHPFSGPSMFTFPFLPFSPMCGNG
                     YVSTQQYGGGSAFPVVHTAYNGSVTPDPVLGGQSTFAVPPMQHFMTGTAGVHQAQGLV
                     GSSNGSSHKKSGNLSCYNCGATGHRAQDCKQPSMDFNRQGTFRLKYAPPAESLDSTD"
ORIGIN      
        1 tctgcgcgcc ccccggccgc ccgcgcgcgg ctcccgggcc cggcggcggg cgcggcgcgg
       61 gcggcagcat ggtggagaag cgttgcccgc tgcagaggga cggcgtgtac cgctggttct
      121 ccgaactgcc gtcaccgcag cgcgtggagt tcctgtgcgg cctgctggac ttgtgcatcc
      181 cgctcgagtt gcgcttcctc ggctcgtgcc tggaggactt ggcacgcaag gactaccatt
      241 cgctgcgcga ctccgagatt aaggccaaca atccggcgga cctgggcagc ctcaccaacc
      301 tgacggacga ggtggtgcgc agcaagctgt tggtgtcgct ggcgctgctg ggctcggagc
      361 agcgcgaggc tgcgggcgtg ttgtaccgca cgctcacgca caccgactcc atcatccaca
      421 actacgggct acagctcaac gagggccgca cgggcgatga gttccttctg ctcttcacca
      481 tggcctccaa ccacccggcc ttcagcttcc accagaagca ggtgctgcgc caggagctca
      541 cgcagatcca gagcagcctg aacggtggcg gtggcggcgg cggcggcggt ggtggcggtg
      601 gcaagagcgc gcccgggccc agcggcgcgc tgcccacctg ctcggcctgt cacaagatgg
      661 ctcccagaac tgagaccccc gtcagcagca tcagcaacag tctggagaac gcattgcata
      721 cgtcagcaca ttccacggag gaggccctgc ccaaaaggcc tttgggaaaa catggcaaag
      781 tgagtgttga aaagatagac ctgaagggat tgtcacacac gaaaagcgac agaggcgttg
      841 agtgctcctt tgaggtctta tggtctgatt cttcagtaac ttcagtaact aagtcttctt
      901 cagaagtgac agaatttatt tcaaagttat cccaactctg ccctgaagag aacttggaca
      961 aactcattcc ttgcttggct ggcccagatt ccttctatgt ggagcgcaac cacgttgatt
     1021 tggaagcagg cctaaggttc ttggcttcaa tcccggccca cacactgaag cacgaccacg
     1081 tcaggaagtt cttcagtgct tcatctccct cccaacagct ccaaagtcca agtcctggca
     1141 acccctcccc tcctaaagtg ggcgccatga tgggcgtgtc tggaaggcct gtgtgtggcg
     1201 tggctggcat cccatcctcg cagagcagca cccagcacca cctgcaacac tcggccagtt
     1261 cttccgcttc cctgccccac tgctcccaca caggaggtgc aggcccagcg ctggcgtacc
     1321 ggacccaagt ggacaactcg cccaccatcc tgatgccctc tggtctgcag gccccccagc
     1381 cccaggagca gaatgggatt ttagactggc ttaggaaact gcgtttgcac aagtattacc
     1441 ccgtctttaa acagctcacc atggagaagt ttctgagcct tactgaagaa gatctgaata
     1501 aatttgagtc cctcaccatg ggagcaaaga aaaagctcaa gactcagttg gagctggaga
     1561 aggagaagtc agagagacgg tgcctcaact cctcagcccc atccttggtc accagcagtg
     1621 gagtggctcg agtcaccccc accagccatg tggggcctgt gcagcctggg cggagcagcc
     1681 acgcttcaga gctgcgggtg gaggtggagc caccggctca ccagctgccc cgagaaggca
     1741 gctcctccga gtattccagt tcctcctcta gccccatggg tgtgcaggct cgagaggaga
     1801 gctcggacag cgccgaggag agcgatagac gtgtggacat ccatgttgag ggtactgaga
     1861 aggagaagcc cgtgatgctt ctggctcact tcccatccag ctcagcaaga cccacagccc
     1921 aggttctgcc tgtgcagaac gagaccggct ccagccctgc gggccaccac cctctgcccg
     1981 cacagctcat gcctgcagct ccacacctgg cgcctgtccg catgctgaac tcggtgcaca
     2041 agtcagacag aggcagcacg gacgtgaagc tcctctcgtc ttctgtccac tcccttctgt
     2101 ctctggagga gaggggaaag ggacctgctc ctagaagtgg cacgaaagtg gacaagagtt
     2161 tcggcggggc tgtgctggac acactgccct cagcagcacc tcacccgcca gtgcagggcc
     2221 tctcgggcct ggtagagaac acctctgtgt cacccaatgt ctcctttggt ccccgggcca
     2281 aagttgtgca tgcagccaca ctggacaggg tgctgaagac agcacagcag ccggccttga
     2341 ctgtggagac cagctcagcc gccacaggga caccgagcac cgtcctgcat gtggcccggc
     2401 cgcccatcaa gctgctgctg tcgtcttctg ttcctgctga caccgccatc tctgggcaga
     2461 cttcttgtcc caacaacggg cagatcagcg tgccccctgc aatactgaac ccccggaatg
     2521 ctctgtacac agccaacacc aaagttgcct tctctgcagt gagcagtgtg cccgtgggcc
     2581 cactgcaggg cagcttctgc gccaatagca acactgcctc ccccagcagc cacccctcca
     2641 cctcttttgc cagcatggcc actctaccca gctgcccagc ccccagctcc agccctgccc
     2701 tctcttctgt cccagagagc agcttctaca gtggcggtgc tggcagcagc tccccaggaa
     2761 acattcctgc ctccagtcag agccaccacc accaccacca ccatcagcag ccccccgcac
     2821 cccccccacc tggctgcatt gtctgcacgt cctgtgggtg cagcggcagc tgtggctcca
     2881 acggcctgac ggtcagctac gccaactact tccagcaccc attctcgggg ccgtccatgt
     2941 tcaccttccc tttcctgccc ttcagtccca tgtgtggcaa tggctatgtc agtacccagc
     3001 agtacggtgg tggctctgcc ttccctgtgg tacacacagc ctacaatggc agtgtgactc
     3061 cagaccctgt cctaggtggg cagtccacgt tcgcagtgcc acccatgcag cacttcatga
     3121 cggggacagc gggggtgcac caagcccaag gcctagtggg cagcagcaat ggctccagtc
     3181 acaaaaagag tgggaatttg tcctgttaca actgtggggc cactggccac cgtgcacagg
     3241 actgcaagca accgtccatg gacttcaacc ggcaaggaac ttttaggttg aaatacgccc
     3301 ctccagcaga aagtctggac tccacggact gatccttttt tttttttttt ggcaacagaa
     3361 cattttatta agccatgaaa aatcacatag agaactgaag tcaagttgct gtggaaccat
     3421 ggagacctaa ggaaaaccac atagagagcg gaagtcgagt tgctgtggcg cttaatattt
     3481 ttaacccaaa ggtgctttac ttcactatac tggatagaga atctagcgta caagtacgtc
     3541 aaactcgatt tcattgccaa attcctagtt ttggagcttg atccaaggat tgcctagtgg
     3601 acatcgcttt ggcagtaaca tggccgtcat accattgctg cagcatgaag acctgtctcc
     3661 tgaagatcga tggtccttct aggctcacac gtaattccag ggcagctatg cacgacctga
     3721 gtcaagactg caggtcagag ttctctcaag ttccccagtc ggatccagga cccctttttg
     3781 ggctaggaag agccagctgg actttgctgt ttcctagagt gggagcctcg tgtctggctt
     3841 cttgaggatt gcactacctg acgagggcct ctgcagtctg ggaggcagcc tctgctggga
     3901 cgggccatgt aggagctcca tcggtgggca ttggggttgg caccagcagg ctgctccgcc
     3961 aggtacaccc agaaaccgat cgcagggtgt tctgtagaca cttggagcag ttccaggttt
     4021 ttaatatttt ttttctgtaa acagatttac actatattag taaataagac gtagctcact
     4081 ctcgacagct tcattccgaa gggtccaagt cccagggaat ccagtcaccg aggcctgaga
     4141 ccagccctcc cattggaggc tttgagcctg ctctctccaa acaagaacca actctcaagg
     4201 acatgggaat gactctgctt tgtgagttgg gtgtgactgc cgcgcctcat tcttcaggaa
     4261 gctagcaagc tatgtgtgtc tcagatggct ttcccaggac cccagcccca gagctcactg
     4321 ctgatgaatt cacacttgac acagacatcc agcagtaata cagttctgtg atttcatgaa
     4381 caaagactgg aaactgtcgg cttcttttgt ataggctgtg tgttgattgt taattccgtt
     4441 aaaattgcct ggaaaacttc agtagagaga cgcaagactc ctcgaaaccg ctcaccagtt
     4501 acctaccaga ccaggggtgg gggtgggtcc tcactcctca acagggcgtg aacgtttcaa
     4561 cccacacagc ggaggcataa gggacttaga cctccgaggt taaagggaat tttatgctca
     4621 gataacatta tttataatgc taaagccttc ggtattaaaa atcgatggta agatcttgcc
     4681 aaggattttc cagcttccta tttacagaga agaagaatca cagtacttaa accattcttc
     4741 agatgggaca atcaccctta tgcagaatta gtgtaaatct aaatacccta gaactggagg
     4801 cgttgtgaca taaggcttca tgctctcaga tgggctttgt gtctgtggag acccacggaa
     4861 ggcttgagtg gtgtggattc tatgcaatgc aggaccgata gacctctgtt ctgtccatgg
     4921 cacacagtat cctctgttct gaggtgatgg tgatgaggca ctaggggatg ctctgttgat
     4981 ctctcactca gaaacactac aaatgtcaac acaagaactg acacaacttt gccttaaaga
     5041 gcaccagact gggattggtc gcattgtgtt aataaggaag acctagagtg ttcactgatg
     5101 tttacgattt taatatttct gaaggccatc acagtggcct gggtatgtgc tgaaagccaa
     5161 acttttaaat tttttggttt tttttaaaca aagaaatatt ttaaataaat cctatttcaa
     5221 cacagttgtt gttgaaaact gtctcataac aaaagaaaaa atcatattta agttttctgt
     5281 tctgtggtca gtatagggaa tgcagtgtct tacggctgtt gatctgctgt ggcaattcca
     5341 cgttaccttg tggcattgag gaggtgagcg agctccagca ccattcattg cagctgtcca
     5401 ggcagcagat gtctgtgtct ggaagccgcc ggctgccttt ggaagcgctt gtgtggtgtg
     5461 gcatctctgt gaagccggct ggtgaggagg agcgaggagc gcgtgcagcc tggccagcag
     5521 gcacctcctc accagacttc atcgttacac acctaacaga ccagcccttt cctgtcattt
     5581 ctctaaaact gctcagtcag gtggcagtgg tgcccaggtg cgacggcccc agactcatgt
     5641 cggattctag ccctgtgtta acatctcggg tacaaagtgg gatattcaga caggaaggag
     5701 ggcacaatgt tgggacaaaa cagctatgtg acctttttgt tgttgtagca aaatactccg
     5761 ttttttacct tcctttccag tttttatttc acggtcagta gtgaaaattg gaaagtgttt
     5821 taatgctgaa aactcctaac tgctgaaggg caccggggga tgggatctag cgctcgcagt
     5881 gaagacaagt tgttgagtgt atgtggctgg gtatccggaa accagcggca ggcacactca
     5941 tctctaaaga tggcagcagc tggcctgtta cacagtactc agcagttccc gtgtgggact
     6001 cattaggctt ccagtcattt ctgcaggtca gcctcgcttg taccacatgc acgtgtgcca
     6061 tgacagtccc gtgaggacag cccaatggga attgggtctc accctcctca ctccgtcccc
     6121 gtttctctgc ttctggcatt tggtctgacg agctagtttt acagccggct aatgggtggc
     6181 atcacttgcc gaagtcttaa aaggttgcag ggacttggtc tatctgttca acctcatccc
     6241 caaggagtct tggggaactt gagcaggggg acagctgtcc tttccaaagt acaggtgact
     6301 cctgtagagc caatcaggtg gcccaagaaa ccatcagtcc agagatggga ctgaccgctg
     6361 acccgtccca gggtttctct gaaaaggcag gcacctgtag tctacacttg gcaatacttc
     6421 agcaaaccac atactgtact ggcagggcca gggccagggc cagggcactg cgctgccaca
     6481 gggggcagtg gccccgcctc caggtcagtt ctcacacaca caggtgttgg taccaggact
     6541 gaaaccttca gattctattg ggcatatttt cttgttagga atgaaggaca attctcccat
     6601 ttttgagcca ttcttttgtc aattctacaa aattgcatgt aactttataa atatttttaa
     6661 aagatatagt tttgtaaata tttaatattc tgctaatttg attttgaatt gtaaatgtca
     6721 agtattgttt ttggggtttt tatgttttat tatactttgt taaaaggaaa aattgtacat
     6781 ttttagactg tttttatgag taaatttaat gtacggaaaa taaaaattta aaaaaactca
     6841 aaagta
//
