LOCUS       NM_001014065            2106 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Rattus norvegicus zinc finger CCHC-type containing 12 (Zcchc12),
            mRNA.
ACCESSION   NM_001014065 XM_233280
VERSION     NM_001014065.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2106)
  AUTHORS   Cho,G., Lim,Y. and Golden,J.A.
  TITLE     XLMR candidate mouse gene, Zcchc12 (Sizn1) is a novel marker of
            Cajal-Retzius cells
  JOURNAL   Gene Expr Patterns 11 (3-4), 216-220 (2011)
   PUBMED   21172456
REFERENCE   2  (bases 1 to 2106)
  AUTHORS   Cho,G., Lim,Y. and Golden,J.A.
  TITLE     SUMO interaction motifs in Sizn1 are required for promyelocytic
            leukemia protein nuclear body localization and for transcriptional
            activation
  JOURNAL   J Biol Chem 284 (29), 19592-19600 (2009)
   PUBMED   19416967
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC089115.1 and BF405776.1.
            
            On Jan 1, 2009 this sequence version replaced NM_001014065.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC089115.1, CO404055.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132267, SAMD00132270
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-2086              BC089115.1         1-2086
            2087-2106           BF405776.1         1-20                c
FEATURES             Location/Qualifiers
     source          1..2106
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="Sprague-Dawley"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq34"
     gene            1..2106
                     /gene="Zcchc12"
                     /note="zinc finger CCHC-type containing 12"
                     /db_xref="GeneID:313436"
                     /db_xref="RGD:1359439"
     exon            1..67
                     /gene="Zcchc12"
                     /inference="alignment:Splign:2.1.0"
     exon            68..84
                     /gene="Zcchc12"
                     /inference="alignment:Splign:2.1.0"
     exon            85..140
                     /gene="Zcchc12"
                     /inference="alignment:Splign:2.1.0"
     exon            141..271
                     /gene="Zcchc12"
                     /inference="alignment:Splign:2.1.0"
     exon            272..2090
                     /gene="Zcchc12"
                     /inference="alignment:Splign:2.1.0"
     CDS             383..1588
                     /gene="Zcchc12"
                     /note="zinc finger, CCHC domain containing 12"
                     /codon_start=1
                     /product="zinc finger CCHC domain-containing protein 12"
                     /protein_id="NP_001014087.1"
                     /db_xref="GeneID:313436"
                     /db_xref="RGD:1359439"
                     /translation="MASILSRMGNSRGQNSPLPPWAHSMLRSLGRSLGPLMASMAERN
                     MKLFSGRAEPAQGEETFENWLSQVTAVLPDWHMPEEEKVRRLMRTLRGPAREVMRLLQ
                     AANPCLDVEDFLRAMKLVFGESESSVTAHSKFVNTVQEPGEKPSLYVIRLEVQLQNAI
                     QAGVFAEREANQARLHQLLVGAEMSTDLRFRLKSLLRVYANEPERLPNFLELIRMIRE
                     EEEWEEAFIHPKRPRRSQSVERALSPTFQSSPPVMISSIDCNVIEIDDSPDDSDEDVI
                     LVEPDDPPLPSSSAGPSFLGRAVSEDQVLVIESPNIFEIQAPSTSSGAGRKNNNNFGE
                     LRRARKRKHTVHCSHCGEEGHSKETCDNESDRGQVFENLIITLQELTHTEERAREIFG
                     EAIGLSELH"
ORIGIN      
        1 gtaggctgct gataaaagct ttgctgctgc cctgggaact gcgctattcg aatccggtta
       61 cctgtggggc gaccggactc acagcagcct atcgaagcgg aatccgagct tgaattcggt
      121 gcagttgatt gtagagctgg tcttgatgtc ctgaacatca ggttttgcga cccccagtcg
      181 atcgaggtcc atcagctgta ccctggaggc aagctttctc acgggaggac acaggctaca
      241 gaggctggaa aatactcgtt tcctagctgg taccctactg agattggaga ctgctgtact
      301 gctgaagata aagcagtttt tgttttgttt ctaaaacgac ttgagcatcg tgtattaaga
      361 tatcctatca ctgttgtcag aaatggctag catcctttca cgcatgggta acagccgggg
      421 gcagaactca cccctgccac cttgggctca ttccatgctg aggtccctgg ggaggagtct
      481 tggtccttta atggccagca tggcagagag aaacatgaag ctgttctctg ggagggcaga
      541 gccagcccag ggggaagaaa cctttgaaaa ctggctgagc caagtaactg cagtgctgcc
      601 tgattggcat atgcctgagg aggaaaaggt caggcgccta atgagaaccc ttagaggccc
      661 tgcccgggag gtcatgcgtt tgctccaggc tgccaatccc tgccttgatg tagaggattt
      721 tttgcgtgca atgaaactgg tctttgggga gtctgagagc agtgtgacag cccacagtaa
      781 atttgttaac actgttcagg aacctggaga gaaaccatcc ctgtatgtga tccgtttaga
      841 ggtgcagctg cagaatgcta tccaggcagg ggtttttgct gagagagagg caaaccaggc
      901 tcgcctgcac cagctcctgg taggggctga gatgagtact gaccttcgat tcaggcttaa
      961 gagtcttctc cgggtatatg caaatgagcc agagcgcctt cccaatttcc tggagttaat
     1021 caggatgata agggaggaag aggaatggga ggaggctttt attcatccaa agcggcccag
     1081 gagatcccag tcagtggaga gggcactcag ccctacattt cagagctccc caccagtaat
     1141 gatcagcagt attgactgca atgtgataga gatagatgac tctcctgatg attccgatga
     1201 ggacgtgatc ttggtggagc ctgacgaccc accactgcca tcctcaagtg cagggccatc
     1261 cttcctaggc agggctgtat ccgaggacca agtgctggtc attgagtccc ctaacatttt
     1321 tgagatccag gctccttcca ccagcagtgg tgctggaagg aagaacaaca ataattttgg
     1381 ggagctgcgc agagccagga agcgcaaaca cacagtccat tgttcccact gtggtgagga
     1441 gggtcactca aaagaaacct gtgacaatga gagtgacagg ggtcaggttt ttgagaatct
     1501 gatcatcacc ctgcaggagc tgacacatac agaggagagg gcaagggaga tctttggaga
     1561 agccattggc ctctctgaac tacactaaga tgctttgctc cagccttaaa ttaaccctta
     1621 cccgtattaa atgttcaatg gtggaaaagt tggggggaca aacttctaat tgcatgaaca
     1681 aacccacaaa gtagctttct ttcttgaata tcagtacagt aaagagaagt ggcctgacct
     1741 atgatcttgt tctctttccc cactgcctaa caaacagcct attttctgtg tgaacctatc
     1801 tccttggtgg ctttattctc tttgtgaaag tggtattgtt cattgttcaa tcctcaagta
     1861 agaaaagtat taaaaagtac aaattaccca gaactctcta ccttgtgcaa cagttgtcaa
     1921 ccctttggtg cctatcctaa atatttctct atatctgtgt tcctagatta gatataagaa
     1981 tagacaaatg tgatcaaata gaagtgttgt tctatatgct gtattttttc accaaaatgt
     2041 atgttgtggc cttctctgtc aataaatata tacatatatg tcagcatcta aaaaaaaaaa
     2101 aaaaaa
//
